rna204, rna204 (mRNA) Nannochloropsis gaditana

Overview
Namerna204
Unique Namerna204
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1329
Alignment locationCM002455.1:526363..529518 -

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Properties
Property NameValue
Productimaginal discs arrested
Orig transcript idgnl|cribi|Naga_100013g13.9826.mrna
Orig protein idgnl|cribi|Naga_100013g13.9826
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:526363..529518 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100013g13gene195Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM30538.1cds204Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna204rna204-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna204 ID=rna204|Name=rna204|organism=Nannochloropsis gaditana|type=mRNA|length=1329bp
CTGAGACGTATGTAGTGGACGTGGAATGTGGGGGGTAAGTTGTCTAAAGT
TGAAGATGACTGTTCCTTATGCCGTGAGGTCCAGGCGAGAGGAGGGGCGC
AGGGTTGGAAGGAGGGCCCGAGGAATGGATAGCTCCGGTCACATAGTTTG
TCACGGGGCCATATCCAGCCTGTCCCATCTTTTTCAATCCACTACAGCGC
GCTTCTCGGTTCTTGTGGGTGTGGTGTTTGCTTTGCAGGCACGCGCCTGC
GGTCAGTGGGGCTGTGTGGTTCTCCCAGACGGGCGGGGGCAGTAGCTTTT
GCACGCAACCAAGGAAGCATCTACGAGAACCTATTTTTTCCCATTTAATC
TTAGTTAAACTCTCTTGTGCACATGACAGGCTTACCAGCGCAACATTCAA
ATCTGCACCATGAGCGCCGAGGCACAGTTGGCCGCTGGGGTCGAGGAACA
AGGCGGAGGGGAGGAGGAAGAAGAATACTACGAGGAGGAGGAGGACCCCG
GGATGGACGGTGCAGTCCCCGGTGAAGACGAGCAGAGAGAAGGCGACAAT
GAGGGTCAAGACGACGGTACAGGCGCAGCCACGCACGATGATCCAGAGCA
TTTGGCAGCGGAGCTTCAGCGGCAGCAAGAGAAGATCCGTCAGGAAGAGG
AGAAGCTGAAGGAAATGATGAAGGATGTCGAGGCCTCCTCCGCGGGCGCG
GTAGGAGCAGCTGGTGGCGTGGAAGAAGGTGCAAACGGCGAAGCAAATGC
AGCGGGACAGGCAGCCATTGATGAGAATTCAATCTACGTCGGTCAGGTCG
ACTACGAAGTCACGCCCGAGGAATTACAGGCTCACTTCCAAGACTGCGGG
ACAATCAACCGGGTCACGATTCTCTGCGACAAGCACACAGGGCGACCGAA
AGGTTTCGCGTACGTGGAGTTTCTGGAGAAGGCCTCAGTGGACGGGGCCT
TGAAACTGGACAACTCGCTCTTGAAGGGGCGTCCGATCAAGGTGACGCAC
AAACGGCACAACGTGCACGGGTTTTTCCGAGGAAGGGGTGGAGGAAGGGG
CCGGGCTCGGGGGGGATTCCGCGGCGGGTATGGAGGGGGCTATGGGTATC
ATCGGCCACGGGGCAGGGGGAGGGGGAGGGGAAGATATCACCCATATTAC
TAGGGCGGTCTGTGTGGGATGGTGACAGTGTTGAAGAGGGAGGACTGCGG
GAGCATTTTTGGTGATGCGCCTCGTGCTCTGACAAGGACGGGACCGGTAA
AAGCTGGGAGTAACGTACCTGAGCCGATGGAGGAAAGGAGCGACAAATAC
TAAATGAAACCTTCCAGGTGATTGTTTTT
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protein sequence of rna204

>rna204-protein ID=rna204-protein|Name=rna204|organism=Nannochloropsis gaditana|type=polypeptide|length=1018bp
MGLPSSNRLAAAVLLKLYLGAQTPQEDATRSGEVADVLDHCFQVISTMTS
SNFPVLQLLLLNEIEAVGYVRHEKPIAVLLRKVHEACGQSLRDCLEAVMR
ALESPDDLITLLTLIQDMLTPPACPTVDGRFLRPTHIEPDSVFGVFLRQL
LLDCNGLDFEGLAFLLDDIKAEMWAICPLSSQSPERSSSCPPTQIPVLSS
TSQQAQKYLQRRILDLEQEGGRDSYEDVEEEIEALLQQHPELPRGQFLRY
LNSSRHREVAGALDALHRYFDYAIRRGGPNATGKTSSSRNIVQYAALNLA
ALHLRLGHTDLAFAAIGETVRAAQQNSDHACMAFALGWLSQLLTLTGDPQ
AEEILFRCLTRAGDQKLRYLESSTALSLAAAEARGGSRLHAGEPLAGLSP
PPRPVPSATCVESAYRRTGPSGGTTTGFWGGGRLAVGLEGSRPRAVWNLL
RRSVVAETAGLAPPLGIAAPPQTTGPPQPVIATLAASLTSALASRDAFPL
TWEEGLQLANRRCAVTAAAWEQLGHREMTLLQARKLLYCASNGYGAEAGA
EGDLGGGTGSKQEVCLARVKLALGALKGRGGDGLEAAEGGSVEGDFGSEE
EVGGAGLGTRGAREPASSLGQGAEKSEGRGGFRPRPLTQMAFAHPGRRGT
RPGGNICAHKRRGERQLSLYEIALTQLARAQDEFAGSSGAMLPIAMTLLE
HEAAVQSGKWRRAYEAGLRLRSLSALPNGPAAVVQGKEAFVEGQLQWTFA
LLESGRVSACVEASQRLADLCGQLSLPLHHIRCLIQLGRAHLRGCPVDPS
SALPSVLRSLTLSERLDVDSLHASATLLLAQIHLRLGFPIKARALLRAAL
PILLEHSPVQEQGEAWITLAHCGLQDLPPFEAMTSPSATSLHTPKDTVKG
PGGLRGAYLDLLDILERAASAFERSQGLRSLQEVYYLQARLHDALSQCLP
GDEAVEKGGLGKETENERCNHKYEREEAATRFFEVVRSLRLNSHWGVDAE
MEEHGGNGGWRCEMRLLA
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mRNA from alignment at CM002455.1:526363..529518-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna204 ID=rna204|Name=rna204|organism=Nannochloropsis gaditana|type=mRNA|length=3156bp|location=Sequence derived from alignment at CM002455.1:526363..529518- (Nannochloropsis gaditana)
GGGTGTGTGAAGAGGCAGGAGGATGGGTCTTCCCTCGTCGAACAGGCTGG CCGCGGCGGTCTTGCTAAAGCTGTATTTAGGCGCTCAGACCCCGCAGGAG GATGCAACCCGATCAGGCGAGGTTGCAGACGTGCTAGACCACTGCTTTCA GGTCATCTCCACAATGACCTCATCTAATTTTCCAGTCCTTCAATTACTTC TACTGAACGAAATAGAGGCCGTGGGCTACGTTAGGCATGAAAAGCCAATT GCCGTGCTTCTGCGCAAGGTGCACGAAGCGTGCGGCCAGTCTCTCCGCGA CTGCCTCGAAGCTGTTATGAGAGCATTGGAATCTCCCGATGATCTCATTA CCCTGCTTACGCTTATCCAAGACATGCTAACGCCACCTGCATGCCCGACT GTAGATGGAAGATTTCTCAGGCCGACGCACATAGAGCCAGACAGCGTATT TGGTGTGTTTTTGCGACAGTTGCTACTTGACTGTAATGGGCTTGACTTTG AGGGTTTGGCGTTTTTGTTGGACGACATAAAAGCTGAAATGTGGGCGATC TGTCCTCTGTCATCGCAATCACCGGAAAGATCTTCATCTTGCCCGCCCAC GCAAATACCCGTGCTCTCAAGCACCTCCCAACAAGCGCAAAAGTACCTGC AACGGCGCATTTTAGACTTGGAACAGGAGGGCGGACGAGACAGTTATGAA GACGTGGAAGAAGAGATAGAAGCGCTCTTGCAGCAGCATCCAGAACTCCC ACGAGGCCAATTCCTGCGTTACCTGAACTCGAGCCGCCACCGCGAGGTAG CGGGTGCCTTGGACGCGCTCCATCGATATTTTGACTATGCGATCCGCCGG GGCGGGCCCAACGCCACTGGCAAGACATCCAGCAGCCGTAACATTGTCCA GTATGCAGCCTTGAACCTTGCCGCGCTTCATTTGAGGCTGGGACACACCG ACCTGGCGTTTGCAGCCATCGGAGAGACCGTACGGGCCGCACAACAGAAC TCAGACCACGCGTGTATGGCCTTCGCCTTGGGCTGGCTCAGCCAGCTTCT GACCCTGACCGGCGACCCGCAGGCAGAAGAAATTCTCTTCCGTTGTCTGA CTCGGGCGGGGGACCAAAAACTCCGGTACTTGGAAAGCTCAACAGCCTTG TCTTTGGCTGCCGCCGAGGCCAGGGGCGGGAGCCGCCTCCATGCAGGAGA GCCCCTGGCCGGCCTCAGCCCCCCGCCCCGCCCCGTACCGTCCGCTACCT GTGTCGAGTCTGCTTACCGGCGGACGGGACCGTCGGGGGGCACCACGACC GGGTTCTGGGGGGGCGGGCGGCTGGCCGTCGGGCTGGAAGGTAGTCGGCC TCGGGCAGTCTGGAACCTGCTCCGTCGCTCTGTGGTCGCCGAGACTGCGG GCCTGGCTCCTCCTCTGGGTATTGCGGCGCCACCACAGACCACGGGGCCT CCCCAGCCCGTCATTGCGACTCTCGCGGCGTCTTTGACCAGCGCCCTGGC GTCGCGGGATGCCTTTCCCCTCACATGGGAGGAAGGACTACAGCTTGCGA ACCGTCGATGCGCTGTGACGGCGGCGGCGTGGGAGCAGTTGGGGCACCGA GAAATGACTTTGCTGCAGGCTAGAAAGCTTCTGTATTGCGCTTCGAACGG CTACGGTGCAGAGGCAGGGGCCGAGGGTGATTTGGGAGGCGGTACGGGGA GTAAGCAGGAAGTGTGTCTAGCGAGAGTCAAGCTCGCGTTAGGTGCCTTG AAAGGCAGAGGCGGGGACGGACTGGAGGCGGCTGAAGGAGGATCGGTCGA GGGAGACTTTGGAAGCGAGGAAGAGGTGGGGGGAGCTGGCCTTGGTACAA GAGGGGCGCGGGAGCCCGCCTCCTCGCTCGGCCAGGGAGCGGAGAAGTCC GAGGGGAGGGGCGGATTTCGACCAAGACCTCTCACGCAAATGGCTTTCGC ACATCCAGGACGGCGAGGCACACGTCCTGGTGGCAATATTTGCGCGCATA AAAGGCGCGGAGAGCGCCAGCTTTCCTTGTACGAGATCGCCTTGACACAG CTGGCCCGCGCGCAAGACGAGTTCGCCGGGTCAAGCGGCGCCATGCTGCC CATCGCCATGACCCTCTTGGAGCACGAAGCCGCAGTCCAGTCCGGAAAAT GGCGCCGCGCCTATGAAGCAGGCCTTCGGCTGCGAAGCCTGAGCGCTCTC CCAAATGGCCCGGCCGCAGTTGTGCAGGGCAAGGAGGCTTTTGTGGAGGG GCAGCTTCAGTGGACGTTCGCCTTGCTGGAGTCTGGGCGGGTTAGCGCCT GCGTGGAAGCATCCCAGCGTCTGGCCGACCTGTGCGGACAGCTGTCGCTC CCTCTGCACCACATTCGCTGCCTGATCCAGCTTGGGCGCGCGCACCTTCG AGGCTGCCCGGTGGACCCATCTTCTGCCCTTCCCTCCGTCTTGCGGTCGC TCACACTCTCCGAGAGGCTCGATGTCGACTCATTGCATGCCTCCGCGACC CTCCTGCTCGCCCAGATTCACCTTCGACTCGGGTTTCCTATCAAAGCACG TGCCCTTCTACGGGCAGCACTGCCCATACTCTTGGAACACTCACCTGTGC AGGAGCAAGGGGAGGCATGGATAACACTCGCGCACTGCGGTCTGCAAGAC CTTCCGCCGTTTGAAGCGATGACGAGCCCGTCTGCTACCAGCCTACACAC CCCGAAGGACACGGTCAAGGGCCCTGGCGGCCTACGTGGGGCGTATTTGG ACCTGCTCGATATCTTGGAACGAGCAGCGAGCGCCTTTGAGCGAAGCCAG GGCCTTCGGAGTCTGCAAGAGGTCTACTATCTTCAAGCGCGGCTGCATGA CGCTCTTTCTCAATGCCTGCCCGGGGACGAAGCGGTGGAGAAGGGGGGAC TGGGTAAAGAGACAGAGAATGAGAGATGTAACCACAAGTACGAGCGGGAG GAGGCCGCGACGCGCTTCTTTGAGGTAGTCCGGTCTCTGAGGCTGAACAG TCATTGGGGCGTGGACGCAGAAATGGAGGAGCACGGAGGAAACGGGGGAT GGCGTTGCGAGATGCGACTACTCGCCTGACCGAATGGGACGATGAGAAAG GGCGTGTGTAAAGGAAAGGTGTGATAGTGGCTGGCGTGTTGAATAACCTT TAACGC
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Coding sequence (CDS) from alignment at CM002455.1:526363..529518-

>rna204 ID=rna204|Name=rna204|organism=Nannochloropsis gaditana|type=CDS|length=3057bp|location=Sequence derived from alignment at CM002455.1:526363..529518- (Nannochloropsis gaditana)
ATGGGTCTTCCCTCGTCGAACAGGCTGGCCGCGGCGGTCTTGCTAAAGCT
GTATTTAGGCGCTCAGACCCCGCAGGAGGATGCAACCCGATCAGGCGAGG
TTGCAGACGTGCTAGACCACTGCTTTCAGGTCATCTCCACAATGACCTCA
TCTAATTTTCCAGTCCTTCAATTACTTCTACTGAACGAAATAGAGGCCGT
GGGCTACGTTAGGCATGAAAAGCCAATTGCCGTGCTTCTGCGCAAGGTGC
ACGAAGCGTGCGGCCAGTCTCTCCGCGACTGCCTCGAAGCTGTTATGAGA
GCATTGGAATCTCCCGATGATCTCATTACCCTGCTTACGCTTATCCAAGA
CATGCTAACGCCACCTGCATGCCCGACTGTAGATGGAAGATTTCTCAGGC
CGACGCACATAGAGCCAGACAGCGTATTTGGTGTGTTTTTGCGACAGTTG
CTACTTGACTGTAATGGGCTTGACTTTGAGGGTTTGGCGTTTTTGTTGGA
CGACATAAAAGCTGAAATGTGGGCGATCTGTCCTCTGTCATCGCAATCAC
CGGAAAGATCTTCATCTTGCCCGCCCACGCAAATACCCGTGCTCTCAAGC
ACCTCCCAACAAGCGCAAAAGTACCTGCAACGGCGCATTTTAGACTTGGA
ACAGGAGGGCGGACGAGACAGTTATGAAGACGTGGAAGAAGAGATAGAAG
CGCTCTTGCAGCAGCATCCAGAACTCCCACGAGGCCAATTCCTGCGTTAC
CTGAACTCGAGCCGCCACCGCGAGGTAGCGGGTGCCTTGGACGCGCTCCA
TCGATATTTTGACTATGCGATCCGCCGGGGCGGGCCCAACGCCACTGGCA
AGACATCCAGCAGCCGTAACATTGTCCAGTATGCAGCCTTGAACCTTGCC
GCGCTTCATTTGAGGCTGGGACACACCGACCTGGCGTTTGCAGCCATCGG
AGAGACCGTACGGGCCGCACAACAGAACTCAGACCACGCGTGTATGGCCT
TCGCCTTGGGCTGGCTCAGCCAGCTTCTGACCCTGACCGGCGACCCGCAG
GCAGAAGAAATTCTCTTCCGTTGTCTGACTCGGGCGGGGGACCAAAAACT
CCGGTACTTGGAAAGCTCAACAGCCTTGTCTTTGGCTGCCGCCGAGGCCA
GGGGCGGGAGCCGCCTCCATGCAGGAGAGCCCCTGGCCGGCCTCAGCCCC
CCGCCCCGCCCCGTACCGTCCGCTACCTGTGTCGAGTCTGCTTACCGGCG
GACGGGACCGTCGGGGGGCACCACGACCGGGTTCTGGGGGGGCGGGCGGC
TGGCCGTCGGGCTGGAAGGTAGTCGGCCTCGGGCAGTCTGGAACCTGCTC
CGTCGCTCTGTGGTCGCCGAGACTGCGGGCCTGGCTCCTCCTCTGGGTAT
TGCGGCGCCACCACAGACCACGGGGCCTCCCCAGCCCGTCATTGCGACTC
TCGCGGCGTCTTTGACCAGCGCCCTGGCGTCGCGGGATGCCTTTCCCCTC
ACATGGGAGGAAGGACTACAGCTTGCGAACCGTCGATGCGCTGTGACGGC
GGCGGCGTGGGAGCAGTTGGGGCACCGAGAAATGACTTTGCTGCAGGCTA
GAAAGCTTCTGTATTGCGCTTCGAACGGCTACGGTGCAGAGGCAGGGGCC
GAGGGTGATTTGGGAGGCGGTACGGGGAGTAAGCAGGAAGTGTGTCTAGC
GAGAGTCAAGCTCGCGTTAGGTGCCTTGAAAGGCAGAGGCGGGGACGGAC
TGGAGGCGGCTGAAGGAGGATCGGTCGAGGGAGACTTTGGAAGCGAGGAA
GAGGTGGGGGGAGCTGGCCTTGGTACAAGAGGGGCGCGGGAGCCCGCCTC
CTCGCTCGGCCAGGGAGCGGAGAAGTCCGAGGGGAGGGGCGGATTTCGAC
CAAGACCTCTCACGCAAATGGCTTTCGCACATCCAGGACGGCGAGGCACA
CGTCCTGGTGGCAATATTTGCGCGCATAAAAGGCGCGGAGAGCGCCAGCT
TTCCTTGTACGAGATCGCCTTGACACAGCTGGCCCGCGCGCAAGACGAGT
TCGCCGGGTCAAGCGGCGCCATGCTGCCCATCGCCATGACCCTCTTGGAG
CACGAAGCCGCAGTCCAGTCCGGAAAATGGCGCCGCGCCTATGAAGCAGG
CCTTCGGCTGCGAAGCCTGAGCGCTCTCCCAAATGGCCCGGCCGCAGTTG
TGCAGGGCAAGGAGGCTTTTGTGGAGGGGCAGCTTCAGTGGACGTTCGCC
TTGCTGGAGTCTGGGCGGGTTAGCGCCTGCGTGGAAGCATCCCAGCGTCT
GGCCGACCTGTGCGGACAGCTGTCGCTCCCTCTGCACCACATTCGCTGCC
TGATCCAGCTTGGGCGCGCGCACCTTCGAGGCTGCCCGGTGGACCCATCT
TCTGCCCTTCCCTCCGTCTTGCGGTCGCTCACACTCTCCGAGAGGCTCGA
TGTCGACTCATTGCATGCCTCCGCGACCCTCCTGCTCGCCCAGATTCACC
TTCGACTCGGGTTTCCTATCAAAGCACGTGCCCTTCTACGGGCAGCACTG
CCCATACTCTTGGAACACTCACCTGTGCAGGAGCAAGGGGAGGCATGGAT
AACACTCGCGCACTGCGGTCTGCAAGACCTTCCGCCGTTTGAAGCGATGA
CGAGCCCGTCTGCTACCAGCCTACACACCCCGAAGGACACGGTCAAGGGC
CCTGGCGGCCTACGTGGGGCGTATTTGGACCTGCTCGATATCTTGGAACG
AGCAGCGAGCGCCTTTGAGCGAAGCCAGGGCCTTCGGAGTCTGCAAGAGG
TCTACTATCTTCAAGCGCGGCTGCATGACGCTCTTTCTCAATGCCTGCCC
GGGGACGAAGCGGTGGAGAAGGGGGGACTGGGTAAAGAGACAGAGAATGA
GAGATGTAACCACAAGTACGAGCGGGAGGAGGCCGCGACGCGCTTCTTTG
AGGTAGTCCGGTCTCTGAGGCTGAACAGTCATTGGGGCGTGGACGCAGAA
ATGGAGGAGCACGGAGGAAACGGGGGATGGCGTTGCGAGATGCGACTACT
CGCCTGA
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Synonyms
Publications