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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100177g18.1017.mrna |
| Orig protein id | gnl|cribi|Naga_100177g18.1017 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:743677..744242 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2036 ID=rna2036|Name=rna2036|organism=Nannochloropsis gaditana|type=mRNA|length=2519bp
GTCAGAGGAAACACCTTATTTTCACCCTTCTTACCTATTTTTCCCAGTCG
GTGGGCTACGCGTGCATGTATTAAGGGGTCCATTTCTGCAGATTTCTCAT
CCAAACATTTATGCAAAAGGTTGCGGGCCTCATACTTTGATGCGTAGGGC
GTCTTCGTGTCGTCCTCGCGAGTGAGTAAAGCATCAATTTTTGCAAAAAA
GTCTGTGTAATGGGGCATGGCGACAGGTCCTCTTGGACTCTACGCTTGCT
GCTCGCTGTCTTCGGCTCGGCGAGGGGCGACCAAGGAGGCCCAAAAAGGG
CCACGTGGACCCAGGTGCAGGATATAAAATCACGTGGACCACTCAAGCAC
GTGATTTAGCTGCGTGTGGTTTAAAAATTTTGAGCTTCAGTGTGTGTCAC
ACAGGCGCGGGGCCGACCACCTCCGTGCAAGCCGTTATGGTTTTCCGTCT
CGGCTTGAGGGGTGCGTGGCCGGCTGCTTCAAGCCTGAGGGGGAGACAAA
AAAAGGCACGTCCCTCCCCTGAGTAGAAGGGTCTTGTTCCTGATGGCTAC
TACCTGCCCTCAAGATATCTAGTTTGATGTGCAACATGCAATGTTCTAAA
TTGAAGAGGACCTCTGCCTTTTAATATGTATCGCATGCTCTGCGGGCTGA
TTTTTATGTCCCTACAACTTCAAGTGTTCTGCTTCCAGAGCATTCCTTTT
GACACATGGTAGCACGCCAACTAATTCTCGGAAACATTTGGCTACTGCTT
TATCTTCCGCTCTACATTATAAGAATTTCTCAATGTGTTCTGCCTGTTGC
GCCCGTACACTTTCGCACGTAACATGCTGTCTTTCGTCTTTCTTGTACTA
AGTACAGCGTATCTACATCCATCACAAACAACTATGCCGTTCGTGGACAC
TCTACGCCACGCTCTTGAGCAACTGCGAGCCAAGTTTAAAGCAGACGTTC
CGCCCCACAAGGTGGGAGACGAAGAGTTGACTGTCGATCCGGCGTTGCAA
GGAGTGGAAAAGGAGCTTCGCATCGCCCTGGACGAGCTGAAGGCTTTCAA
GAACGAGGACGTTAACAAATCACTGCACGCGAAGGACCTGCGGGAGCCCC
GGGAAATTCTTGGCCACGTGGACTCGCTCTATCACGAGGGTAAATTCTGC
GTAGAAGGTGTGAAAGGCATCCCACATGGTCAAGCAAAGCTGGCGGATAT
GCTTGCTGAGGGTCACGAGCTTTTGCACGAGTGCCTTGAGCGGGTCGACT
TCTACACGGTGAGTGAGCCCCTTCGCCCGCTCCAAAACAAGCTCGACAAC
GTGCAGCATGCCCTTGAGTCTCTCCAAGACAAGGAGGACTTGCATCCCCG
AGACTTGCTCCCGCTTCGACGGAAACTCGCAGAGATCGACGCGCACTACC
ACGAGGGGCGATTTGAGTCTGCGGGGAGAGAGGGGGAGCACGTGATTGCG
GAGGGCCAGGCCGTTCTGGCAGCTTTGCTGAACAAGGCGCACGAGACTCT
TCGAGCCCTTCTATTGAAGACGGACTATTACAAAGTGGACCAAGAACTCT
TTTCCATCCACGACCGACTGGAATCCATTAAGATGCGATTGGAAGGCCTC
ATGCGTCATGAAAACGTGACCGAAAAAGACCTCTCCTCCCTGCGCGAGCG
GCTGCAACACTGTGACGCTGAATGGAAGGAGGGGAAAATCGAACTGGAGT
CTGGAGACGTGCCAGCTGGGCAGGCTGTCGTCTCCAGACTTCTTTACGAG
ACCCACAACTTGATGGCGTCCGTCCAAAATAGGATGCAGGGCTGAGTAAG
CGAGGGCGCCGAAAGCCTGAGAGGGAGTCTAAGATTCAGGAAGAAGTAGG
AATAGACGTCTCGCGACGCAGTCTCACTCTTAGTGCGGGATACGTAGGGC
TAATATTCGAGGCGAGAGAGAGAAATATGGGTGAGAAAGGACTTGTGCAG
ACAAGGGTACGAAACAAATACAGCGCTCTCGACAGAAGTGACATGCATGT
TTTTCACGCTAGAGAAAGATCGCCTGGCACGAATCAATTGACGGGGACTA
TAATACGAAATATCTTAATGGGACGTGAATAGTTCGCGTACTCAAATTAT
TTCACATCGATGTAATGACCATAGCTAAGAAAGGGCAGCGGTAAGAATGG
CCTCACCTTATAAAAACAAAAAGCAAGGGCACGTGGGTGTGCGCAAGTCG
AAATATTGCGAATGGGTCACGCAGAAGTTTACGAGGAAAGTGGGGAGAAG
TGTACAAGAAAAATGCCGCACTCCACCAGTACCACGTAAGCAGAAAACGA
TCATATTTTTGCAATCTTGTGCAAGAGGTGGCGATGTCTGTTCACGGAAT
CTAAAAAGAAGAGCGGTCCTTGTAACAGAAGTTTGGCTATAAGCGCGTCT
GTTGAGGTTTGATTTGGTCACCCCCAATGCCCAAAGCACCCGGTCCTCAA
CAATTTATCGGGCTCTTGCCCAGCCAACAAGCTATTGGGTCGTCCGCTCA
CCGCATAGATCGTCACTCC back to topprotein sequence of rna2036 >rna2036-protein ID=rna2036-protein|Name=rna2036|organism=Nannochloropsis gaditana|type=polypeptide|length=117bp
MRYILKGRGPLQFRTLHVAHQTRYLEGSGPRDFISCTWVHVALFGPPWSP
LAEPKTASSKRRVQEDLSPCPITQTFLQKLMLYSLARTTRRRPTHQSMRP
ATFCINVWMRNLQKWTP back to topmRNA from alignment at CM002458.1:743677..744242+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2036 ID=rna2036|Name=rna2036|organism=Nannochloropsis gaditana|type=mRNA|length=566bp|location=Sequence derived from alignment at CM002458.1:743677..744242+ (Nannochloropsis gaditana)
ATGCGATACATATTAAAAGGCAGAGGTCCTCTTCAATTTAGAACATTGCA
TGTTGCACATCAAACTAGATATCTTGAGGGCAGGTAGTAGCCATCAGGAA
CAAGACCCTTCTACTCAGGGGAGGGACGTGCCTTTTTTTGTCTCCCCCTC
AGGCTTGAAGCAGCCGGCCACGCACCCCTCAAGCCGAGACGGAAAACCAT
AACGGCTTGCACGGAGGTGGTCGGCCCCGCGCCTGTGTGACACACACTGA
AGCTCAAAATTTTTAAACCACACGCAGCTAAATCACGTGCTTGAGTGGTC
CACGTGATTTTATATCCTGCACCTGGGTCCACGTGGCCCTTTTTGGGCCT
CCTTGGTCGCCCCTCGCCGAGCCGAAGACAGCGAGCAGCAAGCGTAGAGT
CCAAGAGGACCTGTCGCCATGCCCCATTACACAGACTTTTTTGCAAAAAT
TGATGCTTTACTCACTCGCGAGGACGACACGAAGACGCCCTACGCATCAA
AGTATGAGGCCCGCAACCTTTTGCATAAATGTTTGGATGAGAAATCTGCA
GAAATGGACCCCTTAA back to topCoding sequence (CDS) from alignment at CM002458.1:743677..744242+ >rna2036 ID=rna2036|Name=rna2036|organism=Nannochloropsis gaditana|type=CDS|length=708bp|location=Sequence derived from alignment at CM002458.1:743677..744242+ (Nannochloropsis gaditana)
ATGCGATACATATTAAAAGGCAGAGGTCCTCTTCAATTTAGAACATTGCA
TGTTGCACATCAAACTAGATATCTTGAGGGCAGTGGTCCACGTGATTTTA
TATCCTGCACCTGGGTCCACGTGGCCCTTTTTGGGCCTCCTTGGTCGCCC
CTCGCCGAGCCGAAGACAGCGAGCAGCAAGCGTAGAGTCCAAGAGGACCT
GTCGCCATGCCCCATTACACAGACTTTTTTGCAAAAATTGATGCTTTACT
CACTCGCGAGGACGACACGAAGACGCCCTACGCATCAAAGTATGAGGCCC
GCAACCTTTTGCATAAATGTTTGGATGAGAAATCTGCAGAAATGGACCCC
TTAAATGCGATACATATTAAAAGGCAGAGGTCCTCTTCAATTTAGAACAT
TGCATGTTGCACATCAAACTAGATATCTTGAGGGCAGTGGTCCACGTGAT
TTTATATCCTGCACCTGGGTCCACGTGGCCCTTTTTGGGCCTCCTTGGTC
GCCCCTCGCCGAGCCGAAGACAGCGAGCAGCAAGCGTAGAGTCCAAGAGG
ACCTGTCGCCATGCCCCATTACACAGACTTTTTTGCAAAAATTGATGCTT
TACTCACTCGCGAGGACGACACGAAGACGCCCTACGCATCAAAGTATGAG
GCCCGCAACCTTTTGCATAAATGTTTGGATGAGAAATCTGCAGAAATGGA
CCCCTTAA back to top
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