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Properties
| Property Name | Value |
|---|
| Product | Uncharacterized protein |
| Orig transcript id | gnl|cribi|Naga_100177g17.1008.mrna |
| Orig protein id | gnl|cribi|Naga_100177g17.1008 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:741243..744312 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2035 ID=rna2035|Name=rna2035|organism=Nannochloropsis gaditana|type=mRNA|length=1308bp
ATGTTACATGTATCGCTGAAGATAGGAAAAAATGCTTCAGACACAGGTGC
TTATAGCTATCCAGACAAGAAGCGCATAAAGACTAAGGAGGCTGAGGCGG
GCGATGACGACGATGACGACGATTACCATGCGGCGAATTCTGCAGGGGCT
GGCCATGAGACTCGCGGGACACTGGAGGTCGAGAATGTTACAAGCCATGT
TGAAAATCATCGCAGAGAGGAGGAAAAGTGGTGCAACGCCATGGTGGAAT
ACGCGATGACCATGTCTGCAATCAGGGAGGAGGCGGATCCGGTCTGGTAT
CAGCACGTCCTGCGCAGCGTGCTCGGTCACGGACCTGAGACGGACGTCGC
CGCATATCTGATAGACACAGACGTGAAGAGGCTCGTCTTTTCTCAATTCC
TGGGTGCGAGAGGTGGAACGTCACTGCTCAGCCAGGAGTTGATGCGGAAG
GCGTTTGAACAGTGCGTGGCAAAGTCGGAGGCGAGTCCGGGCGACCCCGA
CGACTCACCTGCACTCTACCTCAACAGCCTTTTCGACCCGCGGGCAGCCA
TTGCCCTCCATCGTAGGCCTGGTGCGGGGCAGTTTCCATCGGCCTCCGAG
GTGTTGGTGCACTCTCTGGACACGGATGCCCTCCTTTCCGCGCTCGCGTG
CCTGGGCTTCGGCGTCGTCTCTGCTCCCAGCACCGAGTGGCGGCTGCAGC
GCGTGGACCCCTTGCATGAGGCCAGCTTGCTCGGCCACGTCCGTGCCTGT
CCTCATTTGAGCCTCAGGCTGCGTCAGAGCGAGAGCCTCTATGCTTTCCC
TTTGGGCGCGCCTCTCCTGGCCGCCCCCCCCGAGCCAACCCCTCCTTTTC
CTGCATCCTTTTCGTTCCAGGCATTTTCGACCCATACAAGCGGCGCAGAG
GACATGGAAGCCGGGTTTCATCTCTCCTGCGGGGACACCTCGCTCTGTGC
GGTGTACCGAGACAGGCTCTGGCCGGGGTCCTGGAGACTGAGGACGTCGC
CGCCTGTCGAGAGGAAGGGCTACGAGGGCGTGCTGCTGCGCTTTTTGTGC
CAGAAGATCGTGCAGGAAGAAGAACATGAGGCCCAAGAAAGGGGGAAAGA
TCTATTGGTGTGGGTGAGTGACGACGCGAGTAGCGAGGGAGGGGCCATCG
GAGAGGCCGACATCCAGAATGTCTTGTGTAACTTAGGCTTTGTGCGAAAG
GGGATGGGAGTGACGATCTATGCGGTGAGCGGACGACCCAATAGCTTGTT
GGCTGGGCAAGAGCCCGATAAATTGTTGAGGACCGGGTGCTTTGGGCATT
GGGGGTGA back to topprotein sequence of rna2035 >rna2035-protein ID=rna2035-protein|Name=rna2035|organism=Nannochloropsis gaditana|type=polypeptide|length=323bp
MLSFVFLVLSTAYLHPSQTTMPFVDTLRHALEQLRAKFKADVPPHKVGDE
ELTVDPALQGVEKELRIALDELKAFKNEDVNKSLHAKDLREPREILGHVD
SLYHEGKFCVEGVKGIPHGQAKLADMLAEGHELLHECLERVDFYTVSEPL
RPLQNKLDNVQHALESLQDKEDLHPRDLLPLRRKLAEIDAHYHEGRFESA
GREGEHVIAEGQAVLAALLNKAHETLRALLLKTDYYKVDQELFSIHDRLE
SIKMRLEGLMRHENVTEKDLSSLRERLQHCDAEWKEGKIELESGDVPAGQ
AVVSRLLYETHNLMASVQNRMQG back to topmRNA from alignment at CM002458.1:741243..744312- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2035 ID=rna2035|Name=rna2035|organism=Nannochloropsis gaditana|type=mRNA|length=3070bp|location=Sequence derived from alignment at CM002458.1:741243..744312- (Nannochloropsis gaditana)
GTCAGAGGAAACACCTTATTTTCACCCTTCTTACCTATTTTTCCCAGTCG
GTGGGCTACGCGTGCATGTATTAAGGGGTCCATTTCTGCAGATTTCTCAT
CCAAACATTTATGCAAAAGGTTGCGGGCCTCATACTTTGATGCGTAGGGC
GTCTTCGTGTCGTCCTCGCGAGTGAGTAAAGCATCAATTTTTGCAAAAAA
GTCTGTGTAATGGGGCATGGCGACAGGTCCTCTTGGACTCTACGCTTGCT
GCTCGCTGTCTTCGGCTCGGCGAGGGGCGACCAAGGAGGCCCAAAAAGGG
CCACGTGGACCCAGGTGCAGGATATAAAATCACGTGGACCACTCAAGCAC
GTGATTTAGCTGCGTGTGGTTTAAAAATTTTGAGCTTCAGTGTGTGTCAC
ACAGGCGCGGGGCCGACCACCTCCGTGCAAGCCGTTATGGTTTTCCGTCT
CGGCTTGAGGGGTGCGTGGCCGGCTGCTTCAAGCCTGAGGGGGAGACAAA
AAAAGGCACGTCCCTCCCCTGAGTAGAAGGGTCTTGTTCCTGATGGCTAC
TACCTGCCCTCAAGATATCTAGTTTGATGTGCAACATGCAATGTTCTAAA
TTGAAGAGGACCTCTGCCTTTTAATATGTATCGCATGCTCTGCGGGCTGA
TTTTTATGTCCCTACAACTTCAAGTGTTCTGCTTCCAGAGCATTCCTTTT
GACACATGGTAGCACGCCAACTAATTCTCGGAAACATTTGGCTACTGCTT
TATCTTCCGCTCTACATTATAAGAATTTCTCAATGTGTTCTGCCTGTTGC
GCCCGTACACTTTCGCACGTAACATGCTGTCTTTCGTCTTTCTTGTACTA
AGTACAGCGTATCTACATCCATCACAAACAACTATGCCGTTCGTGGACAC
TCTACGCCACGCTCTTGAGCAACTGCGAGCCAAGTTTAAAGCAGACGTTC
CGCCCCACAAGGTGGGAGACGAAGAGTTGACTGTCGATCCGGCGTTGCAA
GGAGTGGAAAAGGAGGTAAGACAAGGGGAGGTTGAGTTTGACGGCCTCGT
GCCTTGCATTTAGCAATGGACAGGTAATGTATGCGACTCTATGTAAATGG
TTTAACTCCACTTCCCCCCAATTTTTAGCTTCGCATCGCCCTGGACGAGC
TGAAGGCTTTCAAGAACGAGGACGTTAACAAATCACTGCACGCGAAGGAC
CTGCGGGAGCCCCGGGAAATTCTTGGCCACGTGGTAAGTACCTCAAGTCA
CTCAACGCGTGTTCTTGTACCGTGTAAGACAAGATGCAATATTGAGAGGG
CCAGAGGATTGGTTCAACTGGTCACGTAAGCGTTGGGTACCAAGCATGAG
CACCACTATTGCATTTTTGAACCTCAGCACTCCTTTTCCCTCACAGGACT
CGCTCTATCACGAGGGTAAATTCTGCGTAGAAGGTGTGAAAGGCATCCCA
CATGGTCAAGCAAAGCTGGCGGATATGCTTGCTGAGGGTCACGAGCTTTT
GCACGAGTGCCTTGAGCGGGTCGACTTCTACACGGTGGGTCGTCGTGCTG
ATACTTTCTATGTCCTTCCGACCTGACGGCTGCCTGATGCTCGTCGCAGC
CATTTTTGCTATTACTCACACCCTCTCTTTTGGCGCCCTTGCCCGCATTC
TAGGTGAGTGAGCCCCTTCGCCCGCTCCAAAACAAGCTCGACAACGTGCA
GCATGCCCTTGAGTCTCTCCAAGACAAGGAGGACTTGCATCCCCGAGACT
TGCTCCCGCTTCGACGGAAACTCGCAGAGATCGACGCGCACTACCACGAG
GGGCGATTTGAGTCTGCGGGGAGAGAGGGGGAGCACGTGATTGCGGAGGG
CCAGGCCGTTCTGGCAGCTTTGCTGAACAAGGCGCACGAGACTCTTCGAG
CCCTTCTATTGAAGACGGACTATTACAAAGTAAGATGGAAGGAGGTAGAG
GCTCTGTTTCGATACCTTGCCGTCATATGTTTCATTGAATAAGCGGGGGA
AATGGTCAAGTTATAAAACGCCATTTGTGAGATGTTGTAATCTCTATTTC
CCCCCCTTCCCATTTTTTAATGGCCCCTTCTCTAGGTGGACCAAGAACTC
TTTTCCATCCACGACCGACTGGAATCCATTAAGATGCGATTGGAAGGCCT
CATGCGTCATGAAAACGTGACCGAAAAAGACCTCTCCTCCCTGCGCGAGC
GGCTGCAACACTGTGACGCTGAATGGAAGGAGGGGAAAATCGAACTGGAG
TCTGGAGACGTGCCAGCTGGGCAGGCTGTCGTCTCCAGACTTCTTTACGA
GACCCACAACTTGATGGCGTCCGTCCAAAATAGGATGCAGGGCTGAGTAA
GCGAGGGCGCCGAAAGCCTGAGAGGGAGTCTAAGATTCAGGAAGAAGTAG
GAATAGACGTCTCGCGACGCAGTCTCACTCTTAGTGCGGGATACGTAGGG
CTAATATTCGAGGCGAGAGAGAGAAATATGGGTGAGAAAGGACTTGTGCA
GACAAGGGTACGAAACAAATACAGCGCTCTCGACAGAAGTGACATGCATG
TTTTTCACGCTAGAGAAAGATCGCCTGGCACGAATCAATTGACGGGGACT
ATAATACGAAATATCTTAATGGGACGTGAATAGTTCGCGTACTCAAATTA
TTTCACATCGATGTAATGACCATAGCTAAGAAAGGGCAGCGGTAAGAATG
GCCTCACCTTATAAAAACAAAAAGCAAGGGCACGTGGGTGTGCGCAAGTC
GAAATATTGCGAATGGGTCACGCAGAAGTTTACGAGGAAAGTGGGGAGAA
GTGTACAAGAAAAATGCCGCACTCCACCAGTACCACGTAAGCAGAAAACG
ATCATATTTTTGCAATCTTGTGCAAGAGGTGGCGATGTCTGTTCACGGAA
TCTAAAAAGAAGAGCGGTCCTTGTAACAGAAGTTTGGCTATAAGCGCGTC
TGTTGAGGTTTGATTTGGTCACCCCCAATGCCCAAAGCACCCGGTCCTCA
ACAATTTATCGGGCTCTTGCCCAGCCAACAAGCTATTGGGTCGTCCGCTC
ACCGCATAGATCGTCACTCC back to topCoding sequence (CDS) from alignment at CM002458.1:741243..744312- >rna2035 ID=rna2035|Name=rna2035|organism=Nannochloropsis gaditana|type=CDS|length=4860bp|location=Sequence derived from alignment at CM002458.1:741243..744312- (Nannochloropsis gaditana)
GTGGACCAAGAACTCTTTTCCATCCACGACCGACTGGAATCCATTAAGAT
GCGATTGGAAGGCCTCATGCGTCATGAAAACGTGACCGAAAAAGACCTCT
CCTCCCTGCGCGAGCGGCTGCAACACTGTGACGCTGAATGGAAGGAGGGG
AAAATCGAACTGGAGTCTGGAGACGTGCCAGCTGGGCAGGCTGTCGTCTC
CAGACTTCTTTACGAGACCCACAACTTGATGGCGTCCGTCCAAAATAGGA
TGCAGGGCTGAGTGAGTGAGCCCCTTCGCCCGCTCCAAAACAAGCTCGAC
AACGTGCAGCATGCCCTTGAGTCTCTCCAAGACAAGGAGGACTTGCATCC
CCGAGACTTGCTCCCGCTTCGACGGAAACTCGCAGAGATCGACGCGCACT
ACCACGAGGGGCGATTTGAGTCTGCGGGGAGAGAGGGGGAGCACGTGATT
GCGGAGGGCCAGGCCGTTCTGGCAGCTTTGCTGAACAAGGCGCACGAGAC
TCTTCGAGCCCTTCTATTGAAGACGGACTATTACAAAGACTCGCTCTATC
ACGAGGGTAAATTCTGCGTAGAAGGTGTGAAAGGCATCCCACATGGTCAA
GCAAAGCTGGCGGATATGCTTGCTGAGGGTCACGAGCTTTTGCACGAGTG
CCTTGAGCGGGTCGACTTCTACACGCTTCGCATCGCCCTGGACGAGCTGA
AGGCTTTCAAGAACGAGGACGTTAACAAATCACTGCACGCGAAGGACCTG
CGGGAGCCCCGGGAAATTCTTGGCCACGTGATGCTGTCTTTCGTCTTTCT
TGTACTAAGTACAGCGTATCTACATCCATCACAAACAACTATGCCGTTCG
TGGACACTCTACGCCACGCTCTTGAGCAACTGCGAGCCAAGTTTAAAGCA
GACGTTCCGCCCCACAAGGTGGGAGACGAAGAGTTGACTGTCGATCCGGC
GTTGCAAGGAGTGGAAAAGGAGGTGGACCAAGAACTCTTTTCCATCCACG
ACCGACTGGAATCCATTAAGATGCGATTGGAAGGCCTCATGCGTCATGAA
AACGTGACCGAAAAAGACCTCTCCTCCCTGCGCGAGCGGCTGCAACACTG
TGACGCTGAATGGAAGGAGGGGAAAATCGAACTGGAGTCTGGAGACGTGC
CAGCTGGGCAGGCTGTCGTCTCCAGACTTCTTTACGAGACCCACAACTTG
ATGGCGTCCGTCCAAAATAGGATGCAGGGCTGAGTGAGTGAGCCCCTTCG
CCCGCTCCAAAACAAGCTCGACAACGTGCAGCATGCCCTTGAGTCTCTCC
AAGACAAGGAGGACTTGCATCCCCGAGACTTGCTCCCGCTTCGACGGAAA
CTCGCAGAGATCGACGCGCACTACCACGAGGGGCGATTTGAGTCTGCGGG
GAGAGAGGGGGAGCACGTGATTGCGGAGGGCCAGGCCGTTCTGGCAGCTT
TGCTGAACAAGGCGCACGAGACTCTTCGAGCCCTTCTATTGAAGACGGAC
TATTACAAAGACTCGCTCTATCACGAGGGTAAATTCTGCGTAGAAGGTGT
GAAAGGCATCCCACATGGTCAAGCAAAGCTGGCGGATATGCTTGCTGAGG
GTCACGAGCTTTTGCACGAGTGCCTTGAGCGGGTCGACTTCTACACGCTT
CGCATCGCCCTGGACGAGCTGAAGGCTTTCAAGAACGAGGACGTTAACAA
ATCACTGCACGCGAAGGACCTGCGGGAGCCCCGGGAAATTCTTGGCCACG
TGATGCTGTCTTTCGTCTTTCTTGTACTAAGTACAGCGTATCTACATCCA
TCACAAACAACTATGCCGTTCGTGGACACTCTACGCCACGCTCTTGAGCA
ACTGCGAGCCAAGTTTAAAGCAGACGTTCCGCCCCACAAGGTGGGAGACG
AAGAGTTGACTGTCGATCCGGCGTTGCAAGGAGTGGAAAAGGAGGTGGAC
CAAGAACTCTTTTCCATCCACGACCGACTGGAATCCATTAAGATGCGATT
GGAAGGCCTCATGCGTCATGAAAACGTGACCGAAAAAGACCTCTCCTCCC
TGCGCGAGCGGCTGCAACACTGTGACGCTGAATGGAAGGAGGGGAAAATC
GAACTGGAGTCTGGAGACGTGCCAGCTGGGCAGGCTGTCGTCTCCAGACT
TCTTTACGAGACCCACAACTTGATGGCGTCCGTCCAAAATAGGATGCAGG
GCTGAGTGAGTGAGCCCCTTCGCCCGCTCCAAAACAAGCTCGACAACGTG
CAGCATGCCCTTGAGTCTCTCCAAGACAAGGAGGACTTGCATCCCCGAGA
CTTGCTCCCGCTTCGACGGAAACTCGCAGAGATCGACGCGCACTACCACG
AGGGGCGATTTGAGTCTGCGGGGAGAGAGGGGGAGCACGTGATTGCGGAG
GGCCAGGCCGTTCTGGCAGCTTTGCTGAACAAGGCGCACGAGACTCTTCG
AGCCCTTCTATTGAAGACGGACTATTACAAAGACTCGCTCTATCACGAGG
GTAAATTCTGCGTAGAAGGTGTGAAAGGCATCCCACATGGTCAAGCAAAG
CTGGCGGATATGCTTGCTGAGGGTCACGAGCTTTTGCACGAGTGCCTTGA
GCGGGTCGACTTCTACACGCTTCGCATCGCCCTGGACGAGCTGAAGGCTT
TCAAGAACGAGGACGTTAACAAATCACTGCACGCGAAGGACCTGCGGGAG
CCCCGGGAAATTCTTGGCCACGTGATGCTGTCTTTCGTCTTTCTTGTACT
AAGTACAGCGTATCTACATCCATCACAAACAACTATGCCGTTCGTGGACA
CTCTACGCCACGCTCTTGAGCAACTGCGAGCCAAGTTTAAAGCAGACGTT
CCGCCCCACAAGGTGGGAGACGAAGAGTTGACTGTCGATCCGGCGTTGCA
AGGAGTGGAAAAGGAGGTGGACCAAGAACTCTTTTCCATCCACGACCGAC
TGGAATCCATTAAGATGCGATTGGAAGGCCTCATGCGTCATGAAAACGTG
ACCGAAAAAGACCTCTCCTCCCTGCGCGAGCGGCTGCAACACTGTGACGC
TGAATGGAAGGAGGGGAAAATCGAACTGGAGTCTGGAGACGTGCCAGCTG
GGCAGGCTGTCGTCTCCAGACTTCTTTACGAGACCCACAACTTGATGGCG
TCCGTCCAAAATAGGATGCAGGGCTGAGTGAGTGAGCCCCTTCGCCCGCT
CCAAAACAAGCTCGACAACGTGCAGCATGCCCTTGAGTCTCTCCAAGACA
AGGAGGACTTGCATCCCCGAGACTTGCTCCCGCTTCGACGGAAACTCGCA
GAGATCGACGCGCACTACCACGAGGGGCGATTTGAGTCTGCGGGGAGAGA
GGGGGAGCACGTGATTGCGGAGGGCCAGGCCGTTCTGGCAGCTTTGCTGA
ACAAGGCGCACGAGACTCTTCGAGCCCTTCTATTGAAGACGGACTATTAC
AAAGACTCGCTCTATCACGAGGGTAAATTCTGCGTAGAAGGTGTGAAAGG
CATCCCACATGGTCAAGCAAAGCTGGCGGATATGCTTGCTGAGGGTCACG
AGCTTTTGCACGAGTGCCTTGAGCGGGTCGACTTCTACACGCTTCGCATC
GCCCTGGACGAGCTGAAGGCTTTCAAGAACGAGGACGTTAACAAATCACT
GCACGCGAAGGACCTGCGGGAGCCCCGGGAAATTCTTGGCCACGTGATGC
TGTCTTTCGTCTTTCTTGTACTAAGTACAGCGTATCTACATCCATCACAA
ACAACTATGCCGTTCGTGGACACTCTACGCCACGCTCTTGAGCAACTGCG
AGCCAAGTTTAAAGCAGACGTTCCGCCCCACAAGGTGGGAGACGAAGAGT
TGACTGTCGATCCGGCGTTGCAAGGAGTGGAAAAGGAGGTGGACCAAGAA
CTCTTTTCCATCCACGACCGACTGGAATCCATTAAGATGCGATTGGAAGG
CCTCATGCGTCATGAAAACGTGACCGAAAAAGACCTCTCCTCCCTGCGCG
AGCGGCTGCAACACTGTGACGCTGAATGGAAGGAGGGGAAAATCGAACTG
GAGTCTGGAGACGTGCCAGCTGGGCAGGCTGTCGTCTCCAGACTTCTTTA
CGAGACCCACAACTTGATGGCGTCCGTCCAAAATAGGATGCAGGGCTGAG
TGAGTGAGCCCCTTCGCCCGCTCCAAAACAAGCTCGACAACGTGCAGCAT
GCCCTTGAGTCTCTCCAAGACAAGGAGGACTTGCATCCCCGAGACTTGCT
CCCGCTTCGACGGAAACTCGCAGAGATCGACGCGCACTACCACGAGGGGC
GATTTGAGTCTGCGGGGAGAGAGGGGGAGCACGTGATTGCGGAGGGCCAG
GCCGTTCTGGCAGCTTTGCTGAACAAGGCGCACGAGACTCTTCGAGCCCT
TCTATTGAAGACGGACTATTACAAAGACTCGCTCTATCACGAGGGTAAAT
TCTGCGTAGAAGGTGTGAAAGGCATCCCACATGGTCAAGCAAAGCTGGCG
GATATGCTTGCTGAGGGTCACGAGCTTTTGCACGAGTGCCTTGAGCGGGT
CGACTTCTACACGCTTCGCATCGCCCTGGACGAGCTGAAGGCTTTCAAGA
ACGAGGACGTTAACAAATCACTGCACGCGAAGGACCTGCGGGAGCCCCGG
GAAATTCTTGGCCACGTGATGCTGTCTTTCGTCTTTCTTGTACTAAGTAC
AGCGTATCTACATCCATCACAAACAACTATGCCGTTCGTGGACACTCTAC
GCCACGCTCTTGAGCAACTGCGAGCCAAGTTTAAAGCAGACGTTCCGCCC
CACAAGGTGGGAGACGAAGAGTTGACTGTCGATCCGGCGTTGCAAGGAGT
GGAAAAGGAG back to top
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