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Properties
Property Name | Value |
Product | fg-gap repeat domain protein |
Orig transcript id | gnl|cribi|Naga_100177g14.1003.mrna |
Orig protein id | gnl|cribi|Naga_100177g14.1003 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:737292..739476 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2033 ID=rna2033|Name=rna2033|organism=Nannochloropsis gaditana|type=mRNA|length=1737bp GTCCTCCGTGCCTTACGAATGTATCGTATATGTCCTTTAGCGCTAATTGT AATTCTCTGATTTCTTTTCTTACCAAGGACAGCTACATCTCTACACGAAG GATGATGCAACGTAGCAGAACTCTTATCCTGTCGTTGGCAGCTCTGCTGG GTGGGAGTGTTTTAGTTGACGCTGCCCCCAAAATACAGTCATTGTCGTGC TCTCCTGGAATTGGGGACGCACGCAACGCAGATGTAATCGTGACCTGTGC CCTGCGCGTTGTAGATGCAGACAGTGAGATCGACTTTGCCTACACACGCC TGGTCTCCCCCTCTGGCAAATTCTCTCTGCCCTTGCTTTTCGACGGAGGA AAGTCTTTTGGGCTGACCTCATATACCGGTGCAAATTTGGCAGCCAGTGC CACAATCCCTCGCCATGCAGAAGCCGGATACTGGCAGCTCGATTTTAGCG GTGTGGATGGCTTGCAAGTGGTAAACAAGCAGGGTGCCTCCGTCATGATC ACCTCCAAAGAGGCACGGGACCTTGGGCTCTCTCGTTTCGTGAAGATCTA TTCCCCTGACGACAAGACCCCTCCTTACATCAAGGATGTCGTCTGCACCA CGCCTGTAGATGTCAACATCACCACTACAAACACGGTATACGTAAAGTGC GACTTTACTGTTATAGACACCGGTTCTGGACCCGCAACAGTCCGTGCCAG CTTTGTCAGCCCTGAGGGTGACGCACTTCTTCATATGACGGCTGGCATCA TAAAGGACGTGGTCTCTAGCAATCCCAGCACTGGAGAGGTGGTACTCTCT GCCTCCGTTCCCGTATATACCGGCATGCCGTCTGGAAATTGGACGATGGT CACGGCCATGCCGCTGGCTCCCAGCGCCGAGGACCGGAACGGGAATGAGT TCTATTACGAGGGAGTCGACACTTCCCTTATCTGGACGCGCCCTACCTTC GAGGTCTTCTCCCAACCGGACACGACCCCGCCTGTAGTACAGAAATTTGG GTGCTCTGCAACGCAAGTAATTGTCCCCTTCGGGGGCGAGGACACTTACT CATGCCAGCTCGTCGTGCAAGACGATCTCTCTGGCTTTGCTTACGGTGAG CTTGTATTCGAGAACCCGGATCGCAACAGTACCGCTACGCTCCGTTTCGA TGCAAATACACGTCAAGTACAATTTGCTCGCGGAGGCATCTTCGCACCAA CTTTGAGTTTTGATCCGACAGCGCCAGGCGGCATGTGGACAGTCAGCAAG GAGGGCTTACTCCTGCGGGACCTAGCAGGCAACTTCATCAGTTATAATCC AAAAGAGTTGAACGATCGATCCTACCCTACATTTTTGCTTGTATCCAAGA CCGACGCGCCCCCTGCAAAGGATAGTAAGAGCCCAGCCTCGTCCCTGAAG GCCTCGTATTCTATCATTTTGGCATCTCTTCTTGGACTCTTCATTCTCCA AAGCCGGTAAATATGTAAGGAGATATTGAAAGCAAATACACTTATCATTC AGGAAAGTATGAGCGATGTGCGCCTCTGGAAAGGGCGGCAACGTCAGATT CGAGGAGGGTGTGTGTGCAGGAAAAAGTAAGGGCTGGAAATTACACCGTG CACCATAAATGACATTTACTGGGTCCTTTGCGTGAATCTAGTAAGGAATG TGACAAAAGTGGTTTGCGCTGTGGCTCTTGACTTCAGGAAAAGAAGAAGA AACAACAAAGGAAATGGAAGCATTTATGATTCTCACC back to topprotein sequence of rna2033 >rna2033-protein ID=rna2033-protein|Name=rna2033|organism=Nannochloropsis gaditana|type=polypeptide|length=671bp MDQPGYNNSPRGSILSPGLTHRASKTPRSSGLCDETTSHFQFNEFGLDRQ SSIRKEEENRYITDKEHKMKSPFDTLRHSPRLVAFTPAKRFLLGASVSLV LIGILFVIGFFDNRAMSSPSTSTTHRRSAGVRPASLRGTVGDVGPAAGPA AAASLASTLTGGVLFPRSEDVDHHKPRVMMIPSLKSFSRRNVHHYDTHDP NGRLSGGKSAVKPPAGSREKKRRESEEEDTAVHVEDVDIDDDGKRRSASP DAEDILNIEHASDKLAVVLPHEYETTGVVSHFHSITGVDSNHNFDVNDYF GSSVTSLGGTPGTGLTTLAVGAPGALENSGMIYFLDLEKDGKVKNYTYLT NKDSSLGDHWTSNVALGWTVENIGDLDGDGVDDLAVGAIGYPVGSSQGAV YILFMTPERGIKSHQFITTGEAGFEPFLKENSCFGSSIARIGDLDGDGVT ELAVGAMGLGKQRGGIYILYMNKDGTVKKSTQISSLYGWDHKLNVEDQFG HAVRAIGDLDGDGITELAVGGDGFPSGEFYGSVWILYLTKEGGVKQWRRI DELDGHLEPESLFGGSIDMLGDLDGDGFPELIVGAPGANGFKGDAFIVSL GANATVKHYKSLVDEVGVLSDSIKEEDEFAWSLCNIGDINGDGVPDLALG AETSPADKNFGSLHVVFLTPR back to topmRNA from alignment at CM002458.1:737292..739476+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2033 ID=rna2033|Name=rna2033|organism=Nannochloropsis gaditana|type=mRNA|length=2185bp|location=Sequence derived from alignment at CM002458.1:737292..739476+ (Nannochloropsis gaditana) ATGGATCAACCTGGATATAACAACAGCCCTCGAGGCTCCATATTGAGCCC
GGGCCTGACTCACCGTGCAAGCAAGACCCCCAGGAGTTCAGGTCTCTGTG
ACGAGACGACGTCGCATTTCCAGTTTAACGAGTTCGGTCTCGATGTAAGT
GAGGATGGTAACGTTGTTGTCCATTTTTGCTCCGCTAGTGGTCAGTAGAG
ACAATAGAATTGCTTTATTGGTGTGCAGTGTCGTCTTGTACAGACGAAAT
TACATATGCGATGCGCGCCGAATCTCTCTAACTACCGAAAATCTTCCTTC
CATTCTTCCTCAGCGGCAATCGTCGATccggaaagaggaagaaaatcgcT
ATATAACAGACAAAGAGCACAAAATGAAGAGTCCATTTGACACGCTCCGT
CACAGTCCCCGCCTGGTAGCCTTCACCCCGGCCAAACGGTTTTTGCTTGG
GGCCTCAGTATCCCTGGTGCTTATCGGCATCCTCTTCGTGATTGGCTTCT
TCGATAACCGAGCTATGTCTTCTCCCAGCACAAGTACAACGCATCGTCGG
TCTGCCGGTGTGCGTCCTGCGTCTTTGCGAGGCACCGTCGGCGATGTTGG
CCCTGCTGCTGGGCCCGCTGCAGCGGCCTCTCTCGCCTCCACTCTCACCG
GAGGGGTGCTCTTCCCTCGCAGTGAGGATGTGGACCACCACAAACCACGT
GTGATGATGATTCCATCCTTGAAATCGTTTTCTCGCCGTAATGTCCACCA
TTATGATACACACGACCCGAATGGCAGGTTGTCGGGAGGAAAGTCCGCCG
TGAAGCCGCCGGCGGGAAGCCgtgagaaaaagagacgggaatcggaagaa
gaggacacaGCAGTGCACGTGGAAGATGTAGATATCGATGATGACGGAAA
GCGGCGTTCGGCTTCCCCCGACGCGGAGGATATTCTGAACATCGAACACG
CTTCGGATAAACTCGCTGTGGTACTGCCTCACGAGTACGAGACCACGGGA
GTCGTCTCTCATTTTCATTCGATAACTGGCGTAGACAGTAATCACAACTT
TGACGTCAATGACTACTTCGGATCCTCCGTGACGAGCTTGGGCGGCACCC
CTGGAACGGGGTTGACCACGCTGGCTGTGGGCGCTCCGGGGGCCTTGGAG
AACTCTGGAATGATCTACTTCCTCGacctggagaaggacgggaaagTTAA
GAACTACACCTACCTCACCAACAAAGATAGCTCGCTGGGGGACCATTGGA
CCTCGAACGTGGCCTTGGGGTGGACCGTGGAGAACATAGGAGACCTGGAC
GGGGACGGCGTGGATGACCTGGCGGTGGGCGCCATTGGCTACCCGGTCGG
TAGCTCTCAAGGTGCGGTCTACATCCTCTTCATGACGCCGGAGCGTGGGA
TCAAGAGTCATCAGTTTATTACGACGGGAGAGGCCGGTTTTGAGCccttt
ttgaaagaaaaTTCCTGTTTTGGTTCTTCAATCGCGCGCATTGGTGACCT
GGATGGAGATGGCGTGACAGAACTCGCAGTGGGAGCCATGGGTCTCGGGA
AACAACGCGGTGGAATCTATATTCTCTACATGAATAAAGACGGGACTGTG
AAAAAGAGCACGCAGATCTCCTCGCTTTACGGATGGGATCACAAACTCAA
CGTAGAAGACCAGTTCGGGCACGCTGTGCGGGCTATCGGGGACCTAGACG
GGGATGGAATCACGGAATTGGCTGTAGGCGGGGATGGATTTCCTTCAGGA
GAGTTTTATGGCTCTGTGTGGATCCTATACTtgaccaaggaggggggtgt
GAAGCAATGGCGACGAATCGATGAATTAGACGGACACCTAGAGCCAGAAT
CCCTTTTCGGGGGGTCCATCGACATGCTTGGAGACCTGGACGGCGATGGC
TTTCCAGAACTGATTGTAGGGGCGCCGGGAGCGAACGGATTCAAGGGGGA
TGCGTTCATTGTTTCATTGGGTGCCAATGCCACTGTGAAGCACTACAAAT
CCCTGGTGGACGAAGTAGGTGTCCTTTCCGATAGCatcaaggaagaggat
gagttTGCATGGTCCCTTTGTAACATTGGAGACATTAACGGAGATGGCGT
GCCTGATTTGGCCTTGGGAGCAGAGACGTCACCTGCGGATAAGAACTTTG
GCTCGTTGCACGTAGTGTTCTTGACTCCCCGATAA back to topCoding sequence (CDS) from alignment at CM002458.1:737292..739476+ >rna2033 ID=rna2033|Name=rna2033|organism=Nannochloropsis gaditana|type=CDS|length=4032bp|location=Sequence derived from alignment at CM002458.1:737292..739476+ (Nannochloropsis gaditana) ATGGATCAACCTGGATATAACAACAGCCCTCGAGGCTCCATATTGAGCCC GGGCCTGACTCACCGTGCAAGCAAGACCCCCAGGAGTTCAGGTCTCTGTG ACGAGACGACGTCGCATTTCCAGTTTAACGAGTTCGGTCTCGATCGGCAA TCGTCGATccggaaagaggaagaaaatcgcTATATAACAGACAAAGAGCA CAAAATGAAGAGTCCATTTGACACGCTCCGTCACAGTCCCCGCCTGGTAG CCTTCACCCCGGCCAAACGGTTTTTGCTTGGGGCCTCAGTATCCCTGGTG CTTATCGGCATCCTCTTCGTGATTGGCTTCTTCGATAACCGAGCTATGTC TTCTCCCAGCACAAGTACAACGCATCGTCGGTCTGCCGGTGTGCGTCCTG CGTCTTTGCGAGGCACCGTCGGCGATGTTGGCCCTGCTGCTGGGCCCGCT GCAGCGGCCTCTCTCGCCTCCACTCTCACCGGAGGGGTGCTCTTCCCTCG CAGTGAGGATGTGGACCACCACAAACCACGTGTGATGATGATTCCATCCT TGAAATCGTTTTCTCGCCGTAATGTCCACCATTATGATACACACGACCCG AATGGCAGGTTGTCGGGAGGAAAGTCCGCCGTGAAGCCGCCGGCGGGAAG CCgtgagaaaaagagacgggaatcggaagaagaggacacaGCAGTGCACG TGGAAGATGTAGATATCGATGATGACGGAAAGCGGCGTTCGGCTTCCCCC GACGCGGAGGATATTCTGAACATCGAACACGCTTCGGATAAACTCGCTGT GGTACTGCCTCACGAGTACGAGACCACGGGAGTCGTCTCTCATTTTCATT CGATAACTGGCGTAGACAGTAATCACAACTTTGACGTCAATGACTACTTC GGATCCTCCGTGACGAGCTTGGGCGGCACCCCTGGAACGGGGTTGACCAC GCTGGCTGTGGGCGCTCCGGGGGCCTTGGAGAACTCTGGAATGATCTACT TCCTCGacctggagaaggacgggaaagTTAAGAACTACACCTACCTCACC AACAAAGATAGCTCGCTGGGGGACCATTGGACCTCGAACGTGGCCTTGGG GTGGACCGTGGAGAACATAGGAGACCTGGACGGGGACGGCGTGGATGACC TGGCGGTGGGCGCCATTGGCTACCCGGTCGGTAGCTCTCAAGGTGCGGTC TACATCCTCTTCATGACGCCGGAGCGTGGGATCAAGAGTCATCAGTTTAT TACGACGGGAGAGGCCGGTTTTGAGCcctttttgaaagaaaaTTCCTGTT TTGGTTCTTCAATCGCGCGCATTGGTGACCTGGATGGAGATGGCGTGACA GAACTCGCAGTGGGAGCCATGGGTCTCGGGAAACAACGCGGTGGAATCTA TATTCTCTACATGAATAAAGACGGGACTGTGAAAAAGAGCACGCAGATCT CCTCGCTTTACGGATGGGATCACAAACTCAACGTAGAAGACCAGTTCGGG CACGCTGTGCGGGCTATCGGGGACCTAGACGGGGATGGAATCACGGAATT GGCTGTAGGCGGGGATGGATTTCCTTCAGGAGAGTTTTATGGCTCTGTGT GGATCCTATACTtgaccaaggaggggggtgtGAAGCAATGGCGACGAATC GATGAATTAGACGGACACCTAGAGCCAGAATCCCTTTTCGGGGGGTCCAT CGACATGCTTGGAGACCTGGACGGCGATGGCTTTCCAGAACTGATTGTAG GGGCGCCGGGAGCGAACGGATTCAAGGGGGATGCGTTCATTGTTTCATTG GGTGCCAATGCCACTGTGAAGCACTACAAATCCCTGGTGGACGAAGTAGG TGTCCTTTCCGATAGCatcaaggaagaggatgagttTGCATGGTCCCTTT GTAACATTGGAGACATTAACGGAGATGGCGTGCCTGATTTGGCCTTGGGA GCAGAGACGTCACCTGCGGATAAGAACTTTGGCTCGTTGCACGTAGTGTT CTTGACTCCCCGATAAATGGATCAACCTGGATATAACAACAGCCCTCGAG GCTCCATATTGAGCCCGGGCCTGACTCACCGTGCAAGCAAGACCCCCAGG AGTTCAGGTCTCTGTGACGAGACGACGTCGCATTTCCAGTTTAACGAGTT CGGTCTCGATCGGCAATCGTCGATccggaaagaggaagaaaatcgcTATA TAACAGACAAAGAGCACAAAATGAAGAGTCCATTTGACACGCTCCGTCAC AGTCCCCGCCTGGTAGCCTTCACCCCGGCCAAACGGTTTTTGCTTGGGGC CTCAGTATCCCTGGTGCTTATCGGCATCCTCTTCGTGATTGGCTTCTTCG ATAACCGAGCTATGTCTTCTCCCAGCACAAGTACAACGCATCGTCGGTCT GCCGGTGTGCGTCCTGCGTCTTTGCGAGGCACCGTCGGCGATGTTGGCCC TGCTGCTGGGCCCGCTGCAGCGGCCTCTCTCGCCTCCACTCTCACCGGAG GGGTGCTCTTCCCTCGCAGTGAGGATGTGGACCACCACAAACCACGTGTG ATGATGATTCCATCCTTGAAATCGTTTTCTCGCCGTAATGTCCACCATTA TGATACACACGACCCGAATGGCAGGTTGTCGGGAGGAAAGTCCGCCGTGA AGCCGCCGGCGGGAAGCCgtgagaaaaagagacgggaatcggaagaagag gacacaGCAGTGCACGTGGAAGATGTAGATATCGATGATGACGGAAAGCG GCGTTCGGCTTCCCCCGACGCGGAGGATATTCTGAACATCGAACACGCTT CGGATAAACTCGCTGTGGTACTGCCTCACGAGTACGAGACCACGGGAGTC GTCTCTCATTTTCATTCGATAACTGGCGTAGACAGTAATCACAACTTTGA CGTCAATGACTACTTCGGATCCTCCGTGACGAGCTTGGGCGGCACCCCTG GAACGGGGTTGACCACGCTGGCTGTGGGCGCTCCGGGGGCCTTGGAGAAC TCTGGAATGATCTACTTCCTCGacctggagaaggacgggaaagTTAAGAA CTACACCTACCTCACCAACAAAGATAGCTCGCTGGGGGACCATTGGACCT CGAACGTGGCCTTGGGGTGGACCGTGGAGAACATAGGAGACCTGGACGGG GACGGCGTGGATGACCTGGCGGTGGGCGCCATTGGCTACCCGGTCGGTAG CTCTCAAGGTGCGGTCTACATCCTCTTCATGACGCCGGAGCGTGGGATCA AGAGTCATCAGTTTATTACGACGGGAGAGGCCGGTTTTGAGCcctttttg aaagaaaaTTCCTGTTTTGGTTCTTCAATCGCGCGCATTGGTGACCTGGA TGGAGATGGCGTGACAGAACTCGCAGTGGGAGCCATGGGTCTCGGGAAAC AACGCGGTGGAATCTATATTCTCTACATGAATAAAGACGGGACTGTGAAA AAGAGCACGCAGATCTCCTCGCTTTACGGATGGGATCACAAACTCAACGT AGAAGACCAGTTCGGGCACGCTGTGCGGGCTATCGGGGACCTAGACGGGG ATGGAATCACGGAATTGGCTGTAGGCGGGGATGGATTTCCTTCAGGAGAG TTTTATGGCTCTGTGTGGATCCTATACTtgaccaaggaggggggtgtGAA GCAATGGCGACGAATCGATGAATTAGACGGACACCTAGAGCCAGAATCCC TTTTCGGGGGGTCCATCGACATGCTTGGAGACCTGGACGGCGATGGCTTT CCAGAACTGATTGTAGGGGCGCCGGGAGCGAACGGATTCAAGGGGGATGC GTTCATTGTTTCATTGGGTGCCAATGCCACTGTGAAGCACTACAAATCCC TGGTGGACGAAGTAGGTGTCCTTTCCGATAGCatcaaggaagaggatgag ttTGCATGGTCCCTTTGTAACATTGGAGACATTAACGGAGATGGCGTGCC TGATTTGGCCTTGGGAGCAGAGACGTCACCTGCGGATAAGAACTTTGGCT CGTTGCACGTAGTGTTCTTGACTCCCCGATAA back to top
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