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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100177g13.1011.mrna |
| Orig protein id | gnl|cribi|Naga_100177g13.1011 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:734802..736830 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2032 ID=rna2032|Name=rna2032|organism=Nannochloropsis gaditana|type=mRNA|length=2457bp
ATGGCTCGCTTTCTGAACCTGAACCTTCTGGTGTTCGTGCTCTTGTTTCT
GAGCGGAGCAGCCGCCCAGGAAGGAAAGACAGGCGAATCCACAGAGAAGA
ATCAAAAAGACGCTCCGGTTGAAGCAAAGCTTATTGAGACCTCCGCGCCC
ACGTCTTCAGAAACTACAGCGCCCAAGCCTGAGCATACGTCCCAACCTTC
GACGACGGAAAATGCAAAGGATGCGCTTAAGGAGGAATCGGAGGACATAA
TCCTTCCTCAAGAGGAATATGACACTCCAGACAATGCCCTGGGAAAGACT
ACTTTCGACGGTTCCCTTGAGGAAGCTGTTTTTACGACGGATGCGGATAC
CGGTGCTGGAGAGCAAAAAGAGATAGACGGCGATACCATTGTTCAAGAAG
GAATGGAACCCCCTTCGAATGCATTGGGACAGACGGCTTTCGGGGGCTCC
CTGGAGGAGGCTGTCTTCACAACCGATGTTCCAGAAAAGGACATGATGAA
AGATGTGGCAACGTCACTCGACAATCCTCTGGGGGGACCTTTGGATGAGG
AATTAGAAGCCGCAGCTGCAAGCGAAGTGGATGACGAAATGGAAACTGAG
GCAGATGTGCCAGAAAAGGAGGTGGAGGAGAAAGAGGTGCAGAAGATAGA
GGCAGACGGTACAGATGATGACACTATAGTGAAGGTCACGGAGGTTGAGG
CTGTGACTGACGTGACCGAGGACGCCGCCGCCCCGGCAGTGCCGGAGGAA
GACATTCTAGGGGATGCCATGAAAGCGATCGCCGACTCGGCGGACGACGC
CTCGGTCACTCTCTACATTGCGTCTTTCGAGTGCGACCTCGAGCACGTTA
TCGTCAGCGAGTCCGACAACACCGTGACCTGCTCCGTGGCCGCAGAAGCC
TCGCACGGCGTGTCAACCATCACGGCTGCCTTCTACAACGTGCCCATGAC
CAAGCGCATCCTCATGCACTTCGGCGAGGAGGACCTTATCTCCGGCAGCG
TCCGATCTGGCGTGTGGCAGCTCGAGCTCACCATCCCCAAGGCGGCGGAC
CAGGGCGTGTGGAGCCTGGGCTTCGACGACCAGGGCGCATTTTACGGCTT
GGAGGTGACCGACAAGAAGGGCAACACCGTGAACTATGCGAAGCAGGCGG
CCATGGACTCAATCATCCCCCTGCAGACCAGCCTGACTGTGGAGAGCTAC
GCGGGGAATACCGTCGCTTACCCCCAAGCCAACGTCCAGACCTCCTCGGG
TGTCCTCATTTACGGCGCGGCGTGCGTGGATGCCACGGCCACCGTCACCG
AGGAGGCCAAAACCATCATCTGCGAGGCCCTGGTCATCCCTGACGAGGCG
GGCATCGGCTCATCGACCATCTACATGGTGGGACCCACGAAAAAGACGGT
CCTGCCCATCGTCTTCGACGAGGACTCGGAGGCGCTCCTCGTCCCCGCCA
CCAACGTCACCCGCACCATGTTCCTGCTTACGTCGACCCTGACTGTGCCC
ACCTGGGCGGAGCCCGGCACGTACAGTGTTCCGGTCTCGGGGGCCTACCA
ACCTCGCACGCTCAGTGGGGCCGCGACGGTGCGTCTCATTAACCCTCTCA
CCCTCTCCGCCAAGCCGGCGCTCACAGTGGTGAGTGTCAGCGACAGGAGC
GCGCCCATCCTCAGCAACTTCTATTGCAACAACGGGCGCCAGGTACAGCT
CTCGGATTACGACCCGCTGCCTGTCAACTGCCTCTTGCGGGCCACAGATG
ACTTGTCGGGAGTCTCCTATGCCTCGCTGCACTTCGTCTCTCCCTCCAAA
ACCGACGCGGTCGAGTTCGCCTTCGTCCCCTCCTCCCCGGGCCTGGGCCC
TTTCCCCCCGGCGTCGGTCAAGCAGGTGGCGGAGAACGTGGCGAGTAATT
TTCCCCCTGACACGGAGCCAGGCGCTTGGACCCTCGCGCGCGCCGTCACC
ACCGACAACGCCGGCAACTACAAGGAGTACACTGCCACGGAGCTGGACAA
CGCGAACGTGCAGACCTTTTTCCTCGTCCAGTCCTCCACCAAGACCTTCT
CGATCGCCCCCAAGCCCGGAACGGCGATAAACCCCGACCCAGCGCCTGGC
CAAGCGACCACGGGTCGCGGGGGAGAAGTGGGAGAAGAGGATGAAAATAT
CGACGGAAGGTTGAAAGCCGTCCTGTGGTGGAACGAGCCGGAGAAGCAGT
CGCTTGAGTGCGTACAAGTCACGATTGCAGGCGTTGATGGCGCGACACGG
AGACGCAAGAGAAAGACAAGGGACAGGCAAAGAATCGGCACCAGCACTGG
CAGAGATGTGGTCACTTTGCGTGGCATCCGACAGCGCGGTGGGAGAACGT
GGTGGGAGAGGGTGAGCAGGCATGGGATCGAGGCCGCGAAAGGAATTCTT
CAGTGGCGGTCACCGGCTCGCTTTTTGTGTCACATCACCTATCTCCTCTT
TGATTGA back to topprotein sequence of rna2032 >rna2032-protein ID=rna2032-protein|Name=rna2032|organism=Nannochloropsis gaditana|type=polypeptide|length=476bp
MSFSANCNSLISFLTKDSYISTRRMMQRSRTLILSLAALLGGSVLVDAAP
KIQSLSCSPGIGDARNADVIVTCALRVVDADSEIDFAYTRLVSPSGKFSL
PLLFDGGKSFGLTSYTGANLAASATIPRHAEAGYWQLDFSGVDGLQVVNK
QGASVMITSKEARDLGLSRFVKIYSPDDKTPPYIKDVVCTTPVDVNITTT
NTVYVKCDFTVIDTGSGPATVRASFVSPEGDALLHMTAGIIKDVVSSNPS
TGEVVLSASVPVYTGMPSGNWTMVTAMPLAPSAEDRNGNEFYYEGVDTSL
IWTRPTFEVFSQPDTTPPVVQKFGCSATQVIVPFGGEDTYSCQLVVQDDL
SGFAYGELVFENPDRNSTATLRFDANTRQVQFARGGIFAPTLSFDPTAPG
GMWTVSKEGLLLRDLAGNFISYNPKELNDRSYPTFLLVSKTDAPPAKDSK
SPASSLKASYSIILASLLGLFILQSR back to topmRNA from alignment at CM002458.1:734802..736830+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2032 ID=rna2032|Name=rna2032|organism=Nannochloropsis gaditana|type=mRNA|length=2029bp|location=Sequence derived from alignment at CM002458.1:734802..736830+ (Nannochloropsis gaditana)
GTCCTCCGTGCCTTACGAATGTATCGTATATGTCCTTTAGCGCTAATTGT
AATTCTCTGATTTCTTTTCTTACCAAGGACAGCTACATCTCTACACGAAG
GATGATGCAACGTAGCAGAACTCTTATCCTGTCGTTGGCAGCTCTGCTGG
GTGGGAGTGTTTTAGTTGACGCTGCCCCCAAAATACAGTCATTGTCGTGC
TCTCCTGGAATTGGGGACGCACGCAACGCAGATGTAATCGTGACCTGTGC
CCTGCGCGTTGTAGATGCAGACAGTGAGATCGACTTTGCCTACACACGCC
TGGTCTCCCCCTCTGGCAAATTCTCTCTGCCCTTGCTTTTCGACGGAGGA
AAGTCTTTTGGGCTGACCTCATATACCGGTGCAAATTTGGCAGCCAGTGC
CACAATCCCTCGCCATGCAGAAGCCGGATACTGGCAGGTAAATGCTTTTT
AATAGTTGGCACTTCCGTTATGTATACCACGAACAATAATGAAATGCAGA
GGAAGGATATCCTTGGAAACAaaatttcttcttctgcttgCACGATGCCA
AAAAAATATTAGAAGAGGGGGGCAATTAGCAAAGAACTTGAAGTTGTTAC
GTATAACAAAGTGGGCAtcggaaggggggggcgataTTTGTGTCATAGGA
TACCtcatgcttcctcccctagACTAGGCTCTGAAACTTTATTTCCCATA
AAATATCACTCTCAAAATAAAAAAAACAGCTCGATTTTAGCGGTGTGGAT
GGCTTGCAAGTGGTAAACAAGCAGGGTGCCTCCGTCATGATCACCTCCAA
AGAGGCACGGGACCTTGGGCTCTCTCGTTTCGTGAAGATCTATTCCCCTG
ACGACAAGACCCCTCCTTACATCAAGGATGTCGTCTGCACCACGCCTGTA
GATGTCAACATCACCACTACAAACACGGTATACGTAAAGTGCGACTTTAC
TGTTATAGACACCGGTTCTGGACCCGCAACAGTCCGTGCCAGCTTTGTCA
GCCCTGAGGGTGACGCACTTCTTCATATGACGGCTGGCATCATAAAGGAC
GTGGTCTCTAGCAATCCCAGCACTGGAGAGGTGGTACTCTCTGCCTCCGT
TCCCGTATATACCGGCATGCCGTCTGGAAATTGGACGATGGTCACGGCCA
TGCCGCTGGCTCCCAGCGCCGAGGACCGGAACGGGAATGAGTTCTATTAC
GAGGGAGTCGACACTTCCCTTATCTGGACGCGCCCTACCTTCGAGGTCTT
CTCCCAACCGGACACGACCCCGCCTGTAGTACAGAAATTTGGGTGCTCTG
CAACGCAAGTAATTGTCCCCTTCGGGGGCGAGGACACTTACTCATGCCAG
CTCGTCGTGCAAGACGATCTCTCTGGCTTTGCTTACGGTGAGCTTGTATT
CGAGAACCCGGATCGCAACAGTACCGCTACGCTCCGTTTCGATGCAAATA
CACGTCAAGTACAATTTGCTCGCGGAGGCATCTTCGCACCAACTTTGAGT
TTTGATCCGACAGCGCCAGGCGGCATGTGGACAGTCAGCAAGGAGGGCTT
ACTCCTGCGGGACCTAGCAGGCAACTTCATCAGTTATAATCCAAAAGAGT
TGAACGATCGATCCTACCCTACATTTTTGCTTGTATCCAAGACCGACGCG
CCCCCTGCAAAGGATAGTAAGAGCCCAGCCTCGTCCCTGAAGGCCTCGTA
TTCTATCATTTTGGCATCTCTTCTTGGACTCTTCATTCTCCAAAGCCGGT
AAATATGTAAGGAGATATTGAAAGCAAATACACTTATCATTCAGGAAAGT
ATGAGCGATGTGCGCCTCTGGAAAGGGCGGCAACGTCAGATTCGAGGAGG
GTGTGTGTGCAGGAAAAAGTAAGGGCTGGAAATTACACCGTGCACCATAA
ATGACATTTACTGGGTCCTTTGCGTGAATCTAGTAAGGAATGTGACAAAA
GTGGTTTGCGCTGTGGCTCTTGACttcaggaaaagaagaagaaacaacaa
aggaaatggaagcaTTTATGATTCTCACC back to topCoding sequence (CDS) from alignment at CM002458.1:734802..736830+ >rna2032 ID=rna2032|Name=rna2032|organism=Nannochloropsis gaditana|type=CDS|length=2862bp|location=Sequence derived from alignment at CM002458.1:734802..736830+ (Nannochloropsis gaditana)
ATGTCCTTTAGCGCTAATTGTAATTCTCTGATTTCTTTTCTTACCAAGGA
CAGCTACATCTCTACACGAAGGATGATGCAACGTAGCAGAACTCTTATCC
TGTCGTTGGCAGCTCTGCTGGGTGGGAGTGTTTTAGTTGACGCTGCCCCC
AAAATACAGTCATTGTCGTGCTCTCCTGGAATTGGGGACGCACGCAACGC
AGATGTAATCGTGACCTGTGCCCTGCGCGTTGTAGATGCAGACAGTGAGA
TCGACTTTGCCTACACACGCCTGGTCTCCCCCTCTGGCAAATTCTCTCTG
CCCTTGCTTTTCGACGGAGGAAAGTCTTTTGGGCTGACCTCATATACCGG
TGCAAATTTGGCAGCCAGTGCCACAATCCCTCGCCATGCAGAAGCCGGAT
ACTGGCAGCTCGATTTTAGCGGTGTGGATGGCTTGCAAGTGGTAAACAAG
CAGGGTGCCTCCGTCATGATCACCTCCAAAGAGGCACGGGACCTTGGGCT
CTCTCGTTTCGTGAAGATCTATTCCCCTGACGACAAGACCCCTCCTTACA
TCAAGGATGTCGTCTGCACCACGCCTGTAGATGTCAACATCACCACTACA
AACACGGTATACGTAAAGTGCGACTTTACTGTTATAGACACCGGTTCTGG
ACCCGCAACAGTCCGTGCCAGCTTTGTCAGCCCTGAGGGTGACGCACTTC
TTCATATGACGGCTGGCATCATAAAGGACGTGGTCTCTAGCAATCCCAGC
ACTGGAGAGGTGGTACTCTCTGCCTCCGTTCCCGTATATACCGGCATGCC
GTCTGGAAATTGGACGATGGTCACGGCCATGCCGCTGGCTCCCAGCGCCG
AGGACCGGAACGGGAATGAGTTCTATTACGAGGGAGTCGACACTTCCCTT
ATCTGGACGCGCCCTACCTTCGAGGTCTTCTCCCAACCGGACACGACCCC
GCCTGTAGTACAGAAATTTGGGTGCTCTGCAACGCAAGTAATTGTCCCCT
TCGGGGGCGAGGACACTTACTCATGCCAGCTCGTCGTGCAAGACGATCTC
TCTGGCTTTGCTTACGGTGAGCTTGTATTCGAGAACCCGGATCGCAACAG
TACCGCTACGCTCCGTTTCGATGCAAATACACGTCAAGTACAATTTGCTC
GCGGAGGCATCTTCGCACCAACTTTGAGTTTTGATCCGACAGCGCCAGGC
GGCATGTGGACAGTCAGCAAGGAGGGCTTACTCCTGCGGGACCTAGCAGG
CAACTTCATCAGTTATAATCCAAAAGAGTTGAACGATCGATCCTACCCTA
CATTTTTGCTTGTATCCAAGACCGACGCGCCCCCTGCAAAGGATAGTAAG
AGCCCAGCCTCGTCCCTGAAGGCCTCGTATTCTATCATTTTGGCATCTCT
TCTTGGACTCTTCATTCTCCAAAGCCGGTAAATGTCCTTTAGCGCTAATT
GTAATTCTCTGATTTCTTTTCTTACCAAGGACAGCTACATCTCTACACGA
AGGATGATGCAACGTAGCAGAACTCTTATCCTGTCGTTGGCAGCTCTGCT
GGGTGGGAGTGTTTTAGTTGACGCTGCCCCCAAAATACAGTCATTGTCGT
GCTCTCCTGGAATTGGGGACGCACGCAACGCAGATGTAATCGTGACCTGT
GCCCTGCGCGTTGTAGATGCAGACAGTGAGATCGACTTTGCCTACACACG
CCTGGTCTCCCCCTCTGGCAAATTCTCTCTGCCCTTGCTTTTCGACGGAG
GAAAGTCTTTTGGGCTGACCTCATATACCGGTGCAAATTTGGCAGCCAGT
GCCACAATCCCTCGCCATGCAGAAGCCGGATACTGGCAGCTCGATTTTAG
CGGTGTGGATGGCTTGCAAGTGGTAAACAAGCAGGGTGCCTCCGTCATGA
TCACCTCCAAAGAGGCACGGGACCTTGGGCTCTCTCGTTTCGTGAAGATC
TATTCCCCTGACGACAAGACCCCTCCTTACATCAAGGATGTCGTCTGCAC
CACGCCTGTAGATGTCAACATCACCACTACAAACACGGTATACGTAAAGT
GCGACTTTACTGTTATAGACACCGGTTCTGGACCCGCAACAGTCCGTGCC
AGCTTTGTCAGCCCTGAGGGTGACGCACTTCTTCATATGACGGCTGGCAT
CATAAAGGACGTGGTCTCTAGCAATCCCAGCACTGGAGAGGTGGTACTCT
CTGCCTCCGTTCCCGTATATACCGGCATGCCGTCTGGAAATTGGACGATG
GTCACGGCCATGCCGCTGGCTCCCAGCGCCGAGGACCGGAACGGGAATGA
GTTCTATTACGAGGGAGTCGACACTTCCCTTATCTGGACGCGCCCTACCT
TCGAGGTCTTCTCCCAACCGGACACGACCCCGCCTGTAGTACAGAAATTT
GGGTGCTCTGCAACGCAAGTAATTGTCCCCTTCGGGGGCGAGGACACTTA
CTCATGCCAGCTCGTCGTGCAAGACGATCTCTCTGGCTTTGCTTACGGTG
AGCTTGTATTCGAGAACCCGGATCGCAACAGTACCGCTACGCTCCGTTTC
GATGCAAATACACGTCAAGTACAATTTGCTCGCGGAGGCATCTTCGCACC
AACTTTGAGTTTTGATCCGACAGCGCCAGGCGGCATGTGGACAGTCAGCA
AGGAGGGCTTACTCCTGCGGGACCTAGCAGGCAACTTCATCAGTTATAAT
CCAAAAGAGTTGAACGATCGATCCTACCCTACATTTTTGCTTGTATCCAA
GACCGACGCGCCCCCTGCAAAGGATAGTAAGAGCCCAGCCTCGTCCCTGA
AGGCCTCGTATTCTATCATTTTGGCATCTCTTCTTGGACTCTTCATTCTC
CAAAGCCGGTAA back to top
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