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Properties
Property Name | Value |
Product | tom1 protein |
Orig transcript id | gnl|cribi|Naga_100002g12.4912.mrna |
Orig protein id | gnl|cribi|Naga_100002g12.4912 |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:686509..688046 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2009 ID=rna2009|Name=rna2009|organism=Nannochloropsis gaditana|type=mRNA|length=1641bp CAAGGTCTGATAAATTCGCGCTATCGCGTCTATGCCTGTCCGTACACGTT CTGGGCGCCTGCTCCTTACGGTGCACCTTATCGGCTTGCTGCTAGCGCTT GTTATGAACCTCTCGCATGGGGAATCCCAGGTGATCTCGGAGGAGAAGCA GAAGGAGGCAATCGTTACATCTCATGAGGAGTCAGCGCATCGCGACCGGG CAGGTCCGCCGGTGCAGGCGCATGTTAACAGGCGCGGACCGAAAGAAAAC AAGGCTTTGGAGGAAGAGACAAGTGGGGGCGGCTCGATTCCCGCAGAAGA AGATAGGAAAATGGAGGAGGAGAAGGAGCCTAAATCAATGCCCGAGACGG CAAGCGTGCCCTCGAAGAGCCCCCCCCCCTCCGTCTCAAAAGACAATCAT CGACATTTTTCGTATCGCGGGGAAGAGAGCATTAGGTGGCGGGATCCCAG GGGCGCTGGCCGGCATGATGCAAGTCGTGACCCTCATGTGGTTGCGGACG GTCGGCAACTACCAGTACCGGTACGGGACCTCCTTCACGGAGGCCGTAGC GACGCTTTACAAACAGGGCGGCGTGGGCCGCTTTTACGAGGGACTGGGTT TTGCGCTGATTCAAGGGCCCTTGTCCCGCTTTGGTTCGACGGCGGCAAAC GACGGGTGCCGTGCTCTCCTGAAAAATTTCGAGGCTACCAGAGGCCTTCC CCTCTTCGTTCCTACGGCTATGGCCGCCCTTGCGGCGGGGAGCTGGCGCA TCTTCCTCATGCCCATCGACACAGCCAAGACGGTGCTGCAGGTGGAGGGG AATGAAGGCTACCGGTCGCTGATGCGCAGGATCGCGCGAGGGGAGCTCTC CGCCTTCTACCAGGGGTCTCTGGCTACTGCGGCGGCGGCCGCCCTGGGCC ATTTTCCCTGGTTCTATGTCTACACTCTGCTCAATGAGGCGATCCGGGCC CCTGCGGGCTGGCTGGGCAAGCTCTGTCGCAACGCTTTCATTGGCTTCGT GGCCTCCCTGGTGGCAGACACCCTCACGAACGTGATGAGGGTGGTGAAGA CGACCAAGCAGGCCACTGCCTCCCTCTCATCCATCTCCTACGCGCAGACC GTGCAGATAATCCTGGCCGCGGACGGATGGCACGGGTTGTTCGGTAGGGG GCTGTCGACAAGAATATTGACGAATGGTGAGCAGATCCGGAAGGAGGAGG GCTCTGAAGGGAAAATGATGGGAGGAGAGCGGAATGGCTTGGATGGCTCT GGCATGTGTGAGAGTGACAGGGCTCAGGATTGCTGTTCTCTTTTTCACTT TTCGCCTTCACATCTTCGTGGCGCATGCATTGTCTTGTCATGTACGACAG GATTACAGTCCATCGTCTTCACTGTTGTTTGGCGCGCTCTCTCGGAGTCT GCTTTCTTCCAGAGCATGATCGAGTCCCAGTATGAGGACGACGATGACGG CGCGGGTGAAGATAGTGAGGCATCCGACGGAGCTGAGCGGGCGCATGGCG TGCAAGAATCTAGCCAAGGGAAGACCGGGAAGACGCCGAGCTGATACCAA GGCCATCAAAAAGCATGTAGAATTAAATGTTGTACAATGAATTTCAAAAT ATGTCGACTTTTATCTCGAGAAGACTTTGGTTACCACCTCG back to topprotein sequence of rna2009 >rna2009-protein ID=rna2009-protein|Name=rna2009|organism=Nannochloropsis gaditana|type=polypeptide|length=426bp MEYFTNSKLSQSRSDLLTPVGRLIDDATSETLVTPDWSLNLAVCDAVNSD DEFVGEQAMRAFRRKLREANPKVLQLTLTLLETVIKNADQPGRESRFHAL VGSPDFLAKISSLTDGKRGWEVKEQALALLQQWGLSFESRRDTLAFYSTY MDLRLQGVQFPRLEASSPIFTPPAQPSPATLPASTTPTSEGVVNAETTEI DRGVPASLPSAAPRARTADRDLTKLQQDLGEVRERARACFAMLSHSEGIE SGDEALAEAVGFLEACKERLTEVIEAGMGGGEESMTLTEAVLELALEVHE EVVEVLGAEKSHAELRGGEGKGENEGAKREGRAETGRTDDLLDFDHHPPP APMPRPIPTHPDLTATGGENEGQGGDGARVTQSSDPLDIFEAPPAARVCA LGDAQSLSPAALNALELDDDRDPPVK back to topmRNA from alignment at CM002458.1:686509..688046- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna2009 ID=rna2009|Name=rna2009|organism=Nannochloropsis gaditana|type=mRNA|length=1538bp|location=Sequence derived from alignment at CM002458.1:686509..688046- (Nannochloropsis gaditana) ATGGAGTATTTCACAAATTCGAAGTTGTCACAGTCGCGCTCCGACCTGTT
AACGCCAGTAGGACGGCTTATCGACGACGCCACTTCGGAGACTTTAGTGA
CTCCTGATTGGTCCCTGAATTTGGCCGTTTGCGATGCAGTCAACAGCGAT
GACGAGTTTGTTGGTGAGCAAGCAATGCGGGCCTTTCGCCGCAAGCTCCG
GGAAGCCAACCCGAAGGTGCTCCAGCTAACGCTAACCTTGCTGGAGACTG
TGATCAAGAACGCGGACCAGCCAGGGCGTGAAAGTCGTTTCCATGCGCTT
GTTGGGAGCCCCGATTTCCTCGCGAAGATTTCGTCGTTGACAGACGGCAA
AAGAGGCTGGGAGGTTAAAGAACAGGCTTTAGCCCTGCTGCAGCAGTGGG
GGCTGTCATTTGAGAGCAGGCGGGATACGTTGGCGTTTTACTCAACTTAC
ATGGACCTGCGTCTACAAGGCGTCCAGTTTCCTAGGCTAGAAGCCTCGTC
GCCCATCTTCACTCCCCCGGCCCAGCCGTCTCCTGCCACGCTACCGGCTT
CGACCACTCCCACCTCGGAAGGTGTTGTAAATGCCGAGACAACGGAGATC
GACAGAGGTGTCCCCGCCTCGTTGCCATCAGCAGCACCTCGCGCAAGAAC
AGCAGACCGCGACCTGACCAAATTGCAGCAGGATCTTGGAGAAGTACGAG
AAAGGGCGCGCGCGTGTTTCGCGATGTTATCTCACAGCGAGGGCATTGAG
TCGGGGGATGAAGCTTTGGCCGAGGCCGTGGGTTTCTTGGAGGCGTGCAA
AGAGCGCTTAACAGAGGTGATAGAGGCGGGAATGGGAGGGGGGGAAGAGA
GTATGACACTCACAGAGGCGGTTCTGGAACTCGCATTGGAGGTGCACGAA
GAGGTGGTGGAGGTCCTCGGGGCTGAGAAATCCCATGCGGAGCTCCGAGG
TGGCGAAGGGAAAGGAGAGAATGAAGGTGCGAAGAGGGAGGGGAGGGCGG
AAACGGGTCGGACCGATGATTTGCTCGACTTCGATCACCATCCACCGCCC
GCCCCCATGCCGCGGCCCATTCCTACGCACCCGGACCTGACGGCAACGGG
AGGTGAGAATGAGGGCCAGGGCGGAGATGGCGCCCGAGTGACCCAATCGA
GCGACCCGTTGGACATATTTGAGGCACCTCCTGCTGCACGAGTTTGTGCA
CTCGGAGACGCCCAATCTTTAAGCCCGGCGGCTTTGAATGCCTTAGAGTT
GGACGATGACCGCGACCCGCCAGTGAAGTGACCTTACCTCGAACATTTGG
ATAAGTTACGAATACATATCAGGGATAGCAGAGAGACACGACACAAGAAA
TGTATAGATATTTTTGTAAAAGATAAGGTTGGAATCATAAATCAATTATC
AGTCAGTGAAGACACCTTTAAGGGCGTTGTATTCTGGGGGGGTATGGAGT
AAAGTATTCCACTCAAGCAAGACTATCAATTACTTGCGTGCCATTGTTTG
CCAGTAGAAATACGGGCCTTTGAGTGCAGTAATAGCCC back to topCoding sequence (CDS) from alignment at CM002458.1:686509..688046- >rna2009 ID=rna2009|Name=rna2009|organism=Nannochloropsis gaditana|type=CDS|length=1281bp|location=Sequence derived from alignment at CM002458.1:686509..688046- (Nannochloropsis gaditana) ATGGAGTATTTCACAAATTCGAAGTTGTCACAGTCGCGCTCCGACCTGTT AACGCCAGTAGGACGGCTTATCGACGACGCCACTTCGGAGACTTTAGTGA CTCCTGATTGGTCCCTGAATTTGGCCGTTTGCGATGCAGTCAACAGCGAT GACGAGTTTGTTGGTGAGCAAGCAATGCGGGCCTTTCGCCGCAAGCTCCG GGAAGCCAACCCGAAGGTGCTCCAGCTAACGCTAACCTTGCTGGAGACTG TGATCAAGAACGCGGACCAGCCAGGGCGTGAAAGTCGTTTCCATGCGCTT GTTGGGAGCCCCGATTTCCTCGCGAAGATTTCGTCGTTGACAGACGGCAA AAGAGGCTGGGAGGTTAAAGAACAGGCTTTAGCCCTGCTGCAGCAGTGGG GGCTGTCATTTGAGAGCAGGCGGGATACGTTGGCGTTTTACTCAACTTAC ATGGACCTGCGTCTACAAGGCGTCCAGTTTCCTAGGCTAGAAGCCTCGTC GCCCATCTTCACTCCCCCGGCCCAGCCGTCTCCTGCCACGCTACCGGCTT CGACCACTCCCACCTCGGAAGGTGTTGTAAATGCCGAGACAACGGAGATC GACAGAGGTGTCCCCGCCTCGTTGCCATCAGCAGCACCTCGCGCAAGAAC AGCAGACCGCGACCTGACCAAATTGCAGCAGGATCTTGGAGAAGTACGAG AAAGGGCGCGCGCGTGTTTCGCGATGTTATCTCACAGCGAGGGCATTGAG TCGGGGGATGAAGCTTTGGCCGAGGCCGTGGGTTTCTTGGAGGCGTGCAA AGAGCGCTTAACAGAGGTGATAGAGGCGGGAATGGGAGGGGGGGAAGAGA GTATGACACTCACAGAGGCGGTTCTGGAACTCGCATTGGAGGTGCACGAA GAGGTGGTGGAGGTCCTCGGGGCTGAGAAATCCCATGCGGAGCTCCGAGG TGGCGAAGGGAAAGGAGAGAATGAAGGTGCGAAGAGGGAGGGGAGGGCGG AAACGGGTCGGACCGATGATTTGCTCGACTTCGATCACCATCCACCGCCC GCCCCCATGCCGCGGCCCATTCCTACGCACCCGGACCTGACGGCAACGGG AGGTGAGAATGAGGGCCAGGGCGGAGATGGCGCCCGAGTGACCCAATCGA GCGACCCGTTGGACATATTTGAGGCACCTCCTGCTGCACGAGTTTGTGCA CTCGGAGACGCCCAATCTTTAAGCCCGGCGGCTTTGAATGCCTTAGAGTT GGACGATGACCGCGACCCGCCAGTGAAGTGA back to top
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