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Properties
Property Name | Value |
Product | arginyl-trna synthetase |
Orig transcript id | gnl|cribi|Naga_100002g15.4872.mrna |
Orig protein id | gnl|cribi|Naga_100002g15.4872 |
Gene | ARGRS |
Gbkey | mRNA |
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
CM002458.1 | supercontig | CM002458.1:672593..678587 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna2006 ID=rna2006|Name=rna2006|organism=Nannochloropsis gaditana|type=mRNA|length=741bp ATGCTTGTGTATGTTCCTTACGCCATTTTCTCTTTCGCAGTTTGCAGTAT TCCGCCAGAGTATTGCATCTTTAACCCCCCTGATTTGTACGCCGATTGCC TGAGATGGCAAGCGAAGTGCCACACGGAGCTTTTACCTGAGGGTGCATCG GTCGACGACATGCTGGCAAAGCTTAATCTGCACAATTCCGGAAGTGGAGG GAAAATTAACAGCAGTGGTGATGGTCGAGCAGGTGCCAATGCAGCAGCAG GCGAAGGAGAGAGCACAGGCGAGGGTGAAGAGGATGACGGAAACGGAAGA GAAGAAGACGAATGCGGCAAAAAGAAGAAAGGAGGGCCTAAAGGGATTAA GAAGAAGGAGACGGCATCAGGGGGCAAGGTCCTCATCATGCGCATGTCTC GGAATAAGCGCAAGTCAATCACAGTGGTCACAGGCCTCGATTCCTATCCA GATTTGAAGCTCAAGGACGTGGCCAAGGCGTTGGGAAAGGCCTTTGCGTC CGGAGCATCTGTTTCGGATACCGGCAGCGGAGGGAAGGAAATTGTAATTC AGGGCGACGTCATTGACAGCCTGGCGATAATGCTTGAGGAAAAGTATAAG GTAGGTACCCGCGACAAATATAATGATCAAATCATAAAGCACGTCGTCCA CAAGGAATGTCAGGAGACGAAGAGAAAACATCGATGGCGCACGCCTTGTG TTCCAGCGTTCACCAGACAAAGCGTCAAGCCTGAAGTTTAA back to topprotein sequence of rna2006 >rna2006-protein ID=rna2006-protein|Name=rna2006|organism=Nannochloropsis gaditana|type=polypeptide|length=822bp MEKKKEKRQPERVGAVRSTTAGKNIAARKTTVDSRQGACLYPGGDVEGTH MILAVAHAADIKMKRGFGRKQGSWGDQGPYLDMGTQTVSGVEGAVRALAL NGTSLAACRPATDEWVEWGFRRLAAATSHASEEEEGARHLLQELAVLEAA LARCPRSLLTSEAAKPITTLADIVLAPLSLRALKFFGEHEYPLTRAWAAS VVRGPESPYAATAALVQEGGAFEGTGGKIDPRRGLLAVITALFTEAMHEA FPELAGNPNFRRADVAKCGNAVHGDYQCNSPMAIYKAIKATGRPSVLARP QDVAKALIDSLPAKGHEVCAEVSVAGAGFINVRVQGAYLQARVKDILLHG PQAAMARKLRVLVDFSSPNIAKEMHVGHLRSTIIGDSLCRMLEFLGHDVA RVNHVGDWGTQFGMLIKYLKEEYPNFMQDPPNITDLTGFYKAAKARFDES PAFKERARVGVVELQAGDPESRAIWKLLCDISRAEFQKVYDRLDVRLEEY GESFYNDRIPAVIEELKAENLLEEDGGAMIMWCGGKHQIPLMVRKSDGGY GYDSTDLAAIRYRLKDLSRDWVIYITDAGQATHFHMIFDAARMAGWVDEE HGRHRLDHVGFGVVQGEDGKRFKTRSGDTVRLVDLLDEAVVRMTASLTQR IEDGKSALSKSEACEAAAALGYGAVKYADLKQNPGTDYQFSYDRMLDTKG DTAIYLLFTCARFHSILRKAEEEKGIDVKALEAGGDVVLEHPTERALALE LAQFAEALQQAVLELMPNRLTSYVFFLSARGTDFLEACHVLTHPKRLVLV HATALTIAHCLELLGITPLTKI back to topmRNA from alignment at CM002458.1:672593..678587+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna2006 ID=rna2006|Name=rna2006|organism=Nannochloropsis gaditana|type=mRNA|length=5995bp|location=Sequence derived from alignment at CM002458.1:672593..678587+ (Nannochloropsis gaditana) CCAACTCTGAAGAGATAGTGAAAATGAACAGATTGCGGGGAATGTGAATG
TGGGGGCATCACGTTGGAGAGTGGAGCAGGCAGGTGATGTGCGCAGTGTG
GAATGTTTCCTCGAGGTACTTTTTGTGTTCCTGAGACCTGACAGAACCCT
ACCATTTTACGCAAGCATTTGGTACGCAATATGCACGGTGCCTATCTCTT
ATGTACTTCTCGCTGCTCATGGGCTGTTGTGGTACAAAGTTTTTAAGATA
TAACGAACTTATATATGTGTTGCGGAAATATGGCCGGGCGTGCGTCAGGC
TCACTAAACCATAATCCCGCACTCCATCACACAGGCTGTCGACTCGCTCC
ACATCGATTCAGGCTGGATTGTCGGACAGCCTAGGCACAGCAGCTCTTGC
GCAGAAGTGAAGACAATGCATTGGCTCCTTTTTCAGAACAGAAGCCTAAT
AGGCAGAGGGGGCGCCCCGCCTGGTGTCGCCCTGCGCGTCGCagctttcc
tcttcttcgctgGGGGCGTCGAAACTTTTGTGTTCGGTGGCACATCTTTG
TCCTCGCACAAGGTGTCGCAGCAGCCGTCAGCAGCTCCAGTGGAGTGGGC
ATGGGTAGGGTGGAGACCGTGGTCTGTGGCCCCCCGGCGACCTTGctggg
tggcggcggggaggggaggcgaagagtGGGACAGTGCGGGCAGTAGCGGG
GCCGGAGGTGGGAACGAGATGGGCCGGGAAAACGTATGGGCCACGCAAGC
GCCGGGCGAGGACGACTGGTGCATGGATACGCCCCGCATCCACTATTtgc
gggagatggagaagctGGGCCAGGAGGTGCACGACCTCACGGGGCTGGGC
AGCGGGGGGGCCGCAGACGTGCAGGGGCTGGTGGTATCCACGCCTTGGGC
GCCTGCTCAACCCTTCCAGCCGTCCTCGGTGCCATTCCCGCAGGTGCCCC
CCGGGGCGGCGTCGGAGCAGGCGAAGACAGCGCGGGAGGTGGCCttgcag
gaggagctgcggcgtcaggtggtgatggcggaGGGCTGCGCCATGAACTG
GCGCGAGGAGCCGGCTTTCTGTCGGCCTGTGGGCCACGTGCCTGGCAACC
GGAAGGTGCAGCAGGTGAAGCTCTCAGAGGACCGCGTCATGTATGGCTCC
gacgcgggggcggtggggctgGCCTCAGCCTTGGACGGCCGGGAGCTTTT
CCGCGCGCAGGCGCACGCGGCGCTGGTAACGGCGCTCGACTACGACGCGG
GCACGGGGTGGATGGTGTCGGCGGCGGACGACGGCGTGGTCAAGGTCTTc
cgggagcaggagcgtgaagtaggaggggcagggggggggcgcgtggaATC
TGTGGGGCCAGGAATGCGCCACCACAGCAGccgggtggtggcggcggagg
tcCTGGACCATCGGTGGGGCCTGAGCGCTTCGATGGACGGCAAGATCGTC
GTGTTCGAGCTGGACGGGGGCGCCTTGGTGCAGGAAATGTGGGCATCGGA
CACGCTGCTGGCCGTCACCGTCTGCAAGAACTACGTATTTGCCGGGCTCC
TGGGCGGGCCCGTGGAGGCCTTCTCCATCCGTAACGGCGGCCGCTCCGCC
TTCCGCTACATCGCGCAACGGACGCCGGTGCGCTCGCTGTGCGCGTACCC
CCTGGCAGGGAACCACATCcgcgtggtggtgggcggccAGGACGGGGCCC
TGCGCCAGTTCCAGGTGCGGGCAGTCATGTCCTCGGAGGGGGTGTGGCGC
GTGCCCCAGGACCGCGCCTTCGACGACCGGCTGGTGCTGGTGTGCAACAC
CCACGTGGACCCGGACACGCGCGAGGTGGACCAGGGCTTTGTCCTGACGG
GCCACCGGGGGcccgtggtggcggtggcgtgcgacgaggagaaggtggtg
agcGCCTCGGAGGACGGTTCTGTTATCGTCTGGGACGCAGCCaagtcctc
ccctcgcttcaCGGTCCGTGCGCATGTGGACGGCGAcctggtgggggcgg
tggacTTCAACGAGCGGTATCTGGTGAACGACGGCACGCAGGGCAAGGTG
ATGGTCTGGGACTTCGCGGTCGGCCACCCGCCTCGGAGGCCCGGGAGCAA
TGGGCTGGGGGCTGCTGCAGACGTCGGGAGCCTCGGCGGCAGGCGTCGAC
GGCCCTCTGCGGCAGGCCCGCGAGGCTCGcgtggccagggcggggggcaa
tCCCGTCGGTCgcggacctcctccccctccccccgccatgacggcccccc
tcccgcagACTCCCAGCGTGGGCAGAGCGGaaccccgccccccaccgAAG
CCGAGGACCTGCGGccccacttccccttccttggtGGCTGGAACCTAGGC
CACGGGCCCACAGACctggaaggggtgggaggaacgGGCAGGagcggccc
tccctctccagatGCGACCGTCCCTACAGCGGACGTGGAGCACGCCGAGG
CGGGCACGCCGCTttcgccctccgccgaggaagggggcgacaaggaagag
ggggaagaagggcgctTGTAAAGCTCATCGACCTTGAATCGTTTGCAGAT
GTCTACTTTTTCCGCTTGGAAATATTTGGTCATTCTCATTGTACAGTTAT
TTTCGTGTGCCATACAAAGTACTTTGACTCCCTTGACAGAGCCACCTCGT
TGGGAGTGTTAGCATATATACATAAAAAAGTGAATGATAAGATGTAGTAG
GTGGTAGCGGTATGAACAAGTCGAAGAACCGCATGTAGCAATTGAGATAG
GAGACAGAAGAAGTCGTCAGGTGAAACTTCAACCTGTGTTAATCGATGCC
TGTGCAGGGATAAGAGCCAGATAATATACGGCAGAGGTTTGAAGGGAATA
GATCGAGAGCTTAGCATGGACTCGATTTGTTAGCATTTCTCCTGTACATA
CGCGTGGTTGCGGCCGCGCTGATTTTACAGTCCTCGGGGGCCTGGTGGTT
GGACGCAATGTCGAAAGCTGTTCAAAAGGAAAATGAATATTAAGACTCGG
TCAAGCGGGTTGAAAGTCCAGACTTCACCCTCTGCTGGCGAAGAATGATA
GATCGCAGCGTATGGCTCTTTTAAATTTTCTTGATGTTGAATGGACGGGT
GCTAGCGTGGGAACGTACGCTGCCAGCCCAGCAGCGGCGGTCGGCGAGGC
AGCGAGGCAAGCTTTAGCCACCACTCAGACTGCCGCAATCAcatgccacc
ctccctctagCCTCAGTTGTGCGATAAAGATTAAACATCGCGAAAGATGG
TGCGCGTAGTATGGGGAGATACGGTGATGGGATGTGTAATTGATAGAGGA
GGTGGTATGCTGCCtcggaagaagacgacggCTCGTTTCCCTCGTCTTTG
TTCCACGTCCTTGATTCACTCGGCGTCCATTCCGCCCTATATACTGCACA
GTCCTCTGAAATTACATCAGATAACGGTTTCAGTAGAGAGGTcaagaaga
tggagaagaaaaaggagaaacgcCAGCCTGAACGCGTCGGCGCCGTCCGT
TCGACAACCGCTGGCAAGAACATTGCCGCCAGAAAAACAACTGTAGATTC
CAGACAGGGTGCCTGTTTGTATCCGGGAGGAGACGTTGAGGGGACGCATA
TGATATTGGCTGTGGCCCACGCAGCTGACATAAAGATGAAGCGGGGCTTT
GGTAGAAAGCAGGGCTCTTGGGGGGATCAGGGTCCGTATTTGGACATGGG
AACGCAAACGGTgtcgggcgtggagggagcagTCCGCGCTTTGGCATTGA
ATGGGACATCTCTGGCTGCCTGTCGTCCCGCAACTGACGAATGGGTTGAG
TGGGGATTCCGGAGGCTGGCGGCTGCAACCAGCCACGcgtcagaggagga
agagggcgcaCGGCACCTCCTGCAGGAGCTGGCAGTGCTGGAAGCCGCCC
TCGCCCGATGTCCCCGCAGCCTGCTCACATCAGAGGCGGCCAAACCCATC
ACCACCTTGGCAGACATCGTGCTGGCTCCATTGTCCCTGCGGGCCCTCAA
GTTCTTCGGGGAGCACGAGTACCCCTTAACGCGAGCGTGGGCGGCATCGG
TAGTGAGAGGCCCAGAGAGCCCCTACGCGGCCACAGCGGCCTTGGtacag
gaggggggggcatttGAAGGCACTGGGGGGAAGATAGATCCGCGCCGGGG
GCTGCTGGCTGTCATCACAGCGCTATTCACTGAAGCAATGCATGAAGCAT
TTCCTGAGCTAGCGGGGAACCCGAATTTCCGGCGGGCCGATGTAGCCAAA
TGCGGCAATGCGGTGCACGGAGATTACCAATGCAACAGCCCCATGGCAAT
TTATAAAGCTATCAAGGCTACCGGTAGGCCCTCGGTCCTTGCTCGCCCTC
AAGACGTGGCCAAGGCGCTCATCGACAGCCTCCCTGCCAAGGGCCACGAG
GTGTGCGCCGAGGTCTCTGTCGCTGGCGCTGGATTCATCAACGTGAGGGT
GCAAGGGGCCTACCTTCAGGCGCGAGTCAAGGACATCTTGCTGCACGGGC
CCcaggcggccatggcgcgaaagcttaGAGTCCTGGTCGACTTCTCCAGC
CCCAACATCGCCAAGGAGATGCACGTGGGCCATCTGCGGAGCACCATCAT
CGGGGACAGCCTGTGCCGCATGCTCGAGTTCCTGGGGCATGACGTGGCGC
GAGTCAACCACGTGGGCGACTGGGGCACCCAGTTCGGGATGCTGATCAAG
TATTTGAAGGAGGAGTACCCCAACTTCATGCAGGACCCGCCCAACATCAC
GGACCTGACAGGCTTTTacaaggcggccaaggcgcgGTTCGACGAGTCGC
CCGCTTTCAAAGAGCGCGCCAGGGTCGGTGTTGTCGAGCTGCAAGCTGGG
GATCCCGAGAGTCGGGCCATTTGGAAACTGCTGTGTGACATCTCGCGCGC
CGAGTTCCAGAAGGTGTACGACCGGCTGGACGTGCGACTGGAGGAGTACG
GCGAATCCTTCTACAATGACCGTATTCCCGCGGTGATCGAGGAGCTCAAG
GCTGAAAACTtgctcgaggaagacggcGGAGCCATGATCATGTGGTGTGG
GGGGAAGCATCAGATTCCGCTGATGGTCAGGAAGAGTGACGGTGGGTATG
GCTACGACTCAACGGATTTGGCCGCGATTCGCTACCGGCTCAAGGACCTG
AGTAGGGATTGGGTCATTTACATTACGGATGCGGGTCAAGCGACGCACTT
TCACATGATCTTCGACGCTGCTCGGATGGCGGGGTGGGTGGACGAAGAGC
ATGGCCGGCATCGGCTGGATCATGTTGGCTTTGGCGTCGtgcaaggggag
gatgggaagcgGTTCAAGACCAGGTCTGGCGACACGGTCCGTCTCGTGGA
TCTGCTTGACGAGGCCGTCGTACGGATGACCGCGTCTTTGACGCAGAGGA
TTGAGGATGGCAAGTCGGCCTTGAGTAAGAGCGAGGCTTGCGAGGCTGCG
GCTGCCCTTGGCTACGGCGCTGTCAAGTACGCGGACCTGAAGCAAAACCC
TGGGACCGACTACCAGTTCTCATACGACCGCATGCTTGATACAAAAGGTG
ATACTGCTAtttacctcctcttcacgtGCGCTCGTTTCCATTCCATTTTg
cgcaaggcggaggaggagaaaggcattGATGTCAAGGCCTTAGAGGCGGG
GGGTGACGTGGTCCTCGAGCATCCCACAGAACGTGCACTGGCGCTCGAAT
TGGCACAATTTGCAGAGGCTTTGCAGCAGGCAGTCTTGGAACTGATGCCA
AATCGCCTTACCTCCTatgtcttcttcttgtccgcGCGAGGGACAGATTT
TTTAGAAGCTTGCCATGTCTTGACACATCCAAAACGTCTTGTGCTCGTGC
ACGCAACAGCTTTGACTATCGCGCATTGCTTGGAACTGCTGGGAATCACA
CCTCTGACCAAAATTTAAGGAAATGATAATAGAGAAAGAGCGCCCTGCAA
GCATGATTTTAAGGCAAATTTAAAGTATCACGTATCAACAGGTCG back to topCoding sequence (CDS) from alignment at CM002458.1:672593..678587+ >rna2006 ID=rna2006|Name=rna2006|organism=Nannochloropsis gaditana|type=CDS|length=2469bp|location=Sequence derived from alignment at CM002458.1:672593..678587+ (Nannochloropsis gaditana) atggagaagaaaaaggagaaacgcCAGCCTGAACGCGTCGGCGCCGTCCG TTCGACAACCGCTGGCAAGAACATTGCCGCCAGAAAAACAACTGTAGATT CCAGACAGGGTGCCTGTTTGTATCCGGGAGGAGACGTTGAGGGGACGCAT ATGATATTGGCTGTGGCCCACGCAGCTGACATAAAGATGAAGCGGGGCTT TGGTAGAAAGCAGGGCTCTTGGGGGGATCAGGGTCCGTATTTGGACATGG GAACGCAAACGGTgtcgggcgtggagggagcagTCCGCGCTTTGGCATTG AATGGGACATCTCTGGCTGCCTGTCGTCCCGCAACTGACGAATGGGTTGA GTGGGGATTCCGGAGGCTGGCGGCTGCAACCAGCCACGcgtcagaggagg aagagggcgcaCGGCACCTCCTGCAGGAGCTGGCAGTGCTGGAAGCCGCC CTCGCCCGATGTCCCCGCAGCCTGCTCACATCAGAGGCGGCCAAACCCAT CACCACCTTGGCAGACATCGTGCTGGCTCCATTGTCCCTGCGGGCCCTCA AGTTCTTCGGGGAGCACGAGTACCCCTTAACGCGAGCGTGGGCGGCATCG GTAGTGAGAGGCCCAGAGAGCCCCTACGCGGCCACAGCGGCCTTGGtaca ggaggggggggcatttGAAGGCACTGGGGGGAAGATAGATCCGCGCCGGG GGCTGCTGGCTGTCATCACAGCGCTATTCACTGAAGCAATGCATGAAGCA TTTCCTGAGCTAGCGGGGAACCCGAATTTCCGGCGGGCCGATGTAGCCAA ATGCGGCAATGCGGTGCACGGAGATTACCAATGCAACAGCCCCATGGCAA TTTATAAAGCTATCAAGGCTACCGGTAGGCCCTCGGTCCTTGCTCGCCCT CAAGACGTGGCCAAGGCGCTCATCGACAGCCTCCCTGCCAAGGGCCACGA GGTGTGCGCCGAGGTCTCTGTCGCTGGCGCTGGATTCATCAACGTGAGGG TGCAAGGGGCCTACCTTCAGGCGCGAGTCAAGGACATCTTGCTGCACGGG CCCcaggcggccatggcgcgaaagcttaGAGTCCTGGTCGACTTCTCCAG CCCCAACATCGCCAAGGAGATGCACGTGGGCCATCTGCGGAGCACCATCA TCGGGGACAGCCTGTGCCGCATGCTCGAGTTCCTGGGGCATGACGTGGCG CGAGTCAACCACGTGGGCGACTGGGGCACCCAGTTCGGGATGCTGATCAA GTATTTGAAGGAGGAGTACCCCAACTTCATGCAGGACCCGCCCAACATCA CGGACCTGACAGGCTTTTacaaggcggccaaggcgcgGTTCGACGAGTCG CCCGCTTTCAAAGAGCGCGCCAGGGTCGGTGTTGTCGAGCTGCAAGCTGG GGATCCCGAGAGTCGGGCCATTTGGAAACTGCTGTGTGACATCTCGCGCG CCGAGTTCCAGAAGGTGTACGACCGGCTGGACGTGCGACTGGAGGAGTAC GGCGAATCCTTCTACAATGACCGTATTCCCGCGGTGATCGAGGAGCTCAA GGCTGAAAACTtgctcgaggaagacggcGGAGCCATGATCATGTGGTGTG GGGGGAAGCATCAGATTCCGCTGATGGTCAGGAAGAGTGACGGTGGGTAT GGCTACGACTCAACGGATTTGGCCGCGATTCGCTACCGGCTCAAGGACCT GAGTAGGGATTGGGTCATTTACATTACGGATGCGGGTCAAGCGACGCACT TTCACATGATCTTCGACGCTGCTCGGATGGCGGGGTGGGTGGACGAAGAG CATGGCCGGCATCGGCTGGATCATGTTGGCTTTGGCGTCGtgcaagggga ggatgggaagcgGTTCAAGACCAGGTCTGGCGACACGGTCCGTCTCGTGG ATCTGCTTGACGAGGCCGTCGTACGGATGACCGCGTCTTTGACGCAGAGG ATTGAGGATGGCAAGTCGGCCTTGAGTAAGAGCGAGGCTTGCGAGGCTGC GGCTGCCCTTGGCTACGGCGCTGTCAAGTACGCGGACCTGAAGCAAAACC CTGGGACCGACTACCAGTTCTCATACGACCGCATGCTTGATACAAAAGGT GATACTGCTAtttacctcctcttcacgtGCGCTCGTTTCCATTCCATTTT gcgcaaggcggaggaggagaaaggcattGATGTCAAGGCCTTAGAGGCGG GGGGTGACGTGGTCCTCGAGCATCCCACAGAACGTGCACTGGCGCTCGAA TTGGCACAATTTGCAGAGGCTTTGCAGCAGGCAGTCTTGGAACTGATGCC AAATCGCCTTACCTCCTatgtcttcttcttgtccgcGCGAGGGACAGATT TTTTAGAAGCTTGCCATGTCTTGACACATCCAAAACGTCTTGTGCTCGTG CACGCAACAGCTTTGACTATCGCGCATTGCTTGGAACTGCTGGGAATCAC ACCTCTGACCAAAATTTAA back to top
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