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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100002g29.4892.mrna |
| Orig protein id | gnl|cribi|Naga_100002g29.4892 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:635583..635999 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1989 ID=rna1989|Name=rna1989|organism=Nannochloropsis gaditana|type=mRNA|length=5991bp
ATGTGCACCAACTCACAATCATATCGACGCGCCCGCTCGAAGTCTATGTC
CACATCGACATCACCCGGCCGTCTGAAACATGAAGCAGCAGGGACGACTA
CACCACCGAACAAAGGTGCCGGAGCATCAAAACTAGCCTCTACAGAAGCA
CCCAGGAGCATCACTACGGCGAATGGACACCATGCTGCTCAGTTGAGCAT
TGACACCTGTCCAAGAAGCGGAAGCGAGGGCGGAGGCTTTGGCGGCGAGA
ATTCTCCTTCTCCGTTGCCCCCGCCCCCGGTGCCCCAGTCGTCGCCCTTG
CCGCCCACTGGCAAGGCCGGTGCCGGCGCAGGATGTAGCAGCGTTGGAGG
CGTGAGTGCGTCCGCTGCGCAGCCCACCTCGTCCTCCCTTTCCGGACACC
AGGCAGCGCCGGGTCAAGGGCCCGGGCAGTCGGTCAGTGGTCATACGCCC
GTCCCTGATGGTGGCGCGGAGGATATTGTAAGCAATGCGCCTGTGAGCAG
CGTGACCACGGCAGGGGTCGTCGGACAAGGAGAAGCCGGCATGCGGGGAG
GGGGTCGCGGGAACGGGCGGCTTGGGACTGCGCCTTTGAGGCGAGGCGGG
CACGGGGAAGCTGCGGGGGACTTTACCTCGCCGAGGCCTCTGCACCCCGG
CAGCCATCAGGGTGCGCCAATGCCTTCTTTGCCCACGCGGGTGTCTTCCG
CTCCGCCGGCCGAGAACGTACAGGTGTACGAGAGCACGCAGGGCTACTAC
CAGCACGCAATGAACAGTAAGCAGGCATTTCCCCAGCGGCGTCAGCACGG
CTCCGTTCACCCGGCGTCTTCAGCGATGCGGTCCCCCTACGCCATTGCTC
AGCACCACCAGCAATATCAATCACCGTCCGCATTGCCACCCCCGCCTTCC
AAAGGCCAGGAGGAGGGTGCTCCGTCCCAACGAGGGCAGAGCAATGTGGG
TGCCAAGGGGCTGGCGTCTTCCCAGGAGTCGACTCCCTCCTCCTCCCCCT
TGACCACCCTGAGGGGCACAGGCTCGCCCAAGCAACACCCTTCTCAGCAC
CCTCCGCCCCCATTGCCTTCACATCAGCATCAGCATCAGCAGCCGCCTTA
CCACCCGAAGTCTCCCGCGATGGGCCCGCGAATGGCCGGTCCGCCGTCCC
CCTACCCCCAACCCCCGGCTCCCGTTCTGGCGGGGTTGCCGCTCTACGGC
ACCGGTGCTTTGCTTAAGGGCGGACCTCATCACGGCCACCAAGCGCAGCC
TCATCATCTCCAGGCCCTTCCCGGCCACCCTCCCATGTCGCCGCAGCAGG
GACCCGGGGCCTGGCTCCCCCCGAAGCAGCAAGGGCCTCAGCACCTGTCT
CGCGGGGTGGACCCGCAGACTGGGCACCATGGCGCATCCTCCCACCATGC
CTCGCATGCGCACCACCCGCACGCCTCTCACCATCAGCAGGCATCCCAAC
ACCACCCTTCTTCGGCAGCACCCGCCCATCTCTCTCAACAGCACCATGGG
CACAACGCGCTGCTGCCCAACAGCATTCGACGGGGAAGTGTTCCCACTGG
TGGTGGCTCTGGGGCCTCCAGTAGCGGCTACGAACATGGGCATCATCCAT
CCTTGCCGGGCGGAGGCGCTCCTCGGTCTTACCCGCACCCGCACGCCCAG
CCTCATCACGCGACGTCGCCGCTCCCGGTCATGGGGCCGCGCGGCCATTC
CTTCCCTTACGCGGCCCATCAGTCGCATGCCGGCGGTACACCTGGCTATT
ACGCGTCTTCTCCTGGAGCGAGCGGGCCCCTGCATGGGCACCATCCTCAG
CACTTTCAGCCTCCGCCGCTGCCACCTCAACAGCACCAACCACAACCACC
TTCCCACCTGCAGCAACACCAATCCTCTCCTCAACATGTACATCAGCCGC
TACTGCATCAAGGAGGGTCCACCGGCCTCCCCGGCGGACGTTACAGTGGG
CCACCGGCAAGAGGATACGTGGGCGTGGGGTCCTCGCAAGCCGTAATGAC
ATCTACTTCGTCGGCGCACTATTCGCCTACCTTTCCTTCCCAAACATCAA
CCCCGCTCCCATCGAGTCCCAATCCACGTCCCTTGGTGAAGAGGGAGAGC
AAGGCCCTAGCCATATTGGATAAGGATAACAAGATCGTCAAACCCTCGAC
GGGGACCCCGACAAGCAGCACTCCGCTGGGCTCGCCTTCTCTGGGGGCCG
TGGAGGGCGCGTCGAACAAGGCGACGGCGTCTCCGAAGGGTCTGCAGTCA
CTCCCGCAAAAACTCAACATTGAGCCGACTGCCTCAAGTGATGTCGATAC
ACCGCCAGGGACGAATATCACTTCGACCAGTGAAAGTGCTTCCTTACCGC
TGCAAGCGGACACTGGCGCGGTAGAAGCGGCTGTCAAGGCATCAACAGGG
CCTGACATTGCCGAGAAGGAGGAGGCAGGCCTCAGAGCCCCAGGTTCTAC
GCCGGGAGAGAAGACGAACCCATCACCCCAGCAAGCAACTTCTTCAGAAG
CAAGGGCTGAAGAAACATCGGTGAGTCAGGGAGCCCCCGGCGCCAAAGAT
GGGACAGCGCCTGCTGCGACAAGCAGAGAATTAAAAGAGTCATCGCTCAA
GACTGAGAAAGAGATTGGGTCCCTGGCGGAGACGGAAGCATCCAAAGCCA
GCCTTGCAATGGTCCCGGAACTGGAAAAAGGGGACGACGATATCAGCAAG
AGGATGGCTGGTGTGTCCATCGTGGCCGAGTCGCCTCTCCCGCGCTCGAC
CGTGTCGAAGCCCGGCAAAGAAATACGAAATTCCACAGAAGAGTCATGCA
AAGAGGAAGCTGTAGAACATTTACCTGCGAAAAAGCATGTCTACGTGAAG
GCCGTACTGGAGTCGCTCAAGCCCATTGACATGTCTCAGCCCGCTGAGCT
CGTGGGCAGGCTTCAGGTGACCAGGATAACCGGGTCGTCGGGCCTGGGGG
GGGTTGGCTTGGGTATGACGCGCACTTCAGGTATAGGAAGCTCTATCAAC
CGCAGTGGACCCTCGATCACTACCTTGGAAGAGGGACCCTGGGTTCGGAA
ACCTTTGTCGATGGATCGAAAGTCGAGCGATTCTCTCAGCGGCTCGCGCA
ACGGCTACGGTGGTCTGGGTGGGGCCAGTCCCGGGGGAAGCTCGTCGGGG
AGCGGGGCTGGAGGCAGTGGGGGGAGTGCATGGCGTCGGGGAGAACAGGT
ACCGATTCAGAAAAGTAGAGAAGCAGGTGGTGGAAATACTTCGCGGGCAG
GTCCATCGGCTGACTTTGCCCGGAGGCGTGAGAACGTGGGTTTGGCCCGT
TCCAGGAATGCCTGGAGCCCGCAGCGAGACACCTCTGGTCTCGAGCATTG
TGAGGCTCGAGTACGAGGCTTGTTGAATAAAATGACGTGGGATACGTTCG
ACAAGTTATCCACTCAACTATGCGGCATCGAAATCGACTCTAAGGACATG
CTCTCAAAAATCATTTCTCTTGTTTTCGACAAGGCTGTCGATGAGCCTTT
TTTCGGAGAAATGTACGCCACACTATGTGTGGACGTTAGCAAGAAGAGCG
GGGAGTGGTCAGTCATCAGGACAGGGCAGGACTTGGACAAAAATGGAAAG
TATTTCTGGACAGATGACATTATGGTTGAAAAGGAGATCGTGGGGCCCTT
CCCATCTCGAGAGGCGTGTCTTGAGGCTGCAATCAGTGACCAAGAGCCAA
TCGCGCAGGCTCGCACACAGAAATTGCGTCTTTGTGAATTGATTATCACA
GGTGATAAGTTCGTGAAGGTGCTGGAGAGCATGGAGGGAGGGAGCGGAGC
AGCGCGGCAGTACTTCACTGTTTTCCGGGCTTTGACGGAGGAGGAAGAAG
GACAGGAAAGGGTCCGCGACAGGATCCACGGTGGCTTCGAGGATGAAATA
AGTGCCATGGAGGACGGGCACCGTGCAACCACCTTCAAGAAGTTGTTGTT
GAAAAAGTGTCAGGAGGAGTTCTACAAGGAGAACAACTACGACGACATGG
TCAGGTCGACGTCGAGCTCTGGAGCCTCGCGACAAGAGCTAGCTCAAAGA
CAAGCAGAAGAGGAGGAAGCCCGCATGAAATCGAAGAGGCGGATGCTGGG
GAACATCCGTTTCATTGGTGAACTTTACAAAAAGAAGATGCTCAAGGAAC
GCATAATGCATGAGTGTATCCTCAAGCTTCTGGGATTCGTCGAACAGCGT
GGAGATCGACCAGGGGATCGGAAGCTTGTAAAGCGGTCAACTGGTTGGGA
CGAAGAATCGTTGGAAGCCCTCTGTAAATTGCTTTCAACGGTTGGGGAGC
AGTTGGATGAGGTGAAATGCATAGCGGGCGATAAGCAACGGACGAAAGGC
CGGCCTCCCCCCGAGCACCACGAGAAGGATATAACATTCTACTACAAGCA
ACTTCGCGATTTGAGTGTGGACAAGAAATCAGGGCTGACCGCACGAGCCC
GATTCATGATCAAGGACCTGTTGGAACTACGGGAGAACAAATGGGTCTTG
AGGCGCGTGGAGGTGAAGGCGACGAAGACAGAGGAGTTTAGAAGAGGTAT
GGAGGCAAGTAAGTCCGGAAGTAGTAGTCCATCTGGGAGTGATGGGCGAA
GTGGACAGCACGGTGGGAGTGGCGGAAGAGGCTCTGCACCCTCTCCTGTG
CTTTCACGTCAGGGGTCTCTGGACAAATCTGGACGAGGAACGGCCGGGGG
CGGAGGCGACAAGAGATCCCTGCGAGGCGGAGTCGGAGAAACAATTGGGA
GAGATAGGAGGGGTAACATTCCTCCAGCGGCGATGGACAGAAGAGGAGGA
CCGGGCCGGAACATAAGTCAGTCGCCCATGAGCGACCACGGTGATGAGAG
GGGAGCTCGGGGCTCTTTGTCAAGCAATTGTGATAGCAAAGCCTATTCGC
GACCAAGCATGGGAGGAATAGTCGATGGTCCAGGAGTCTCGACACGGTCA
CGCGAGGAGGTAGACAGCGTTGTGCAGACTGTCATCGCTGAGTTCATGAG
CTTGAGAGACGAAGCGGAGGTGGAGGCTTCAATGGATTTGGTACCGCGAC
TGGTTGGCAGCGAAGTGGCAGCCAATAAAATTCTGGGCCGTCTCATTGAC
TGTAAAGATAACGAGCGTGGGCCCCTTATCCAGCTTCTTCTTTTACTCAT
CAAAAGTCATCGCATCCAGAGCAAGGACCTCAAAGGAGAGATGCAGTTGG
TGATGGAGACGCTGGAAGACCTACTGGTTGACGTGCCGCACGTCTATGAT
AATTTTGCATTTGCAGTCGCTGCCTTGCTTCGCACGAAGGCTCTGGACTT
CGCGTGGTTCCAATCCGAGGCTCGGGGAGCATTGCCGGAGGAAAAAGCCT
TCACCCGCCTGATGACGGCGGTCTTCAGAGCGTACGACGCTGACCGCCGC
GCTCCTTGGTCGTGGGACTTGGTAAAGAGTGCGGGCGAAGTGCTCTTTGC
CGCATATCACGAGAGAGATCGCTGTCAATTTATGAATTTTGTAGAAGAAC
ATCAATTGTGGGCGACTTATGTCGAGCCATTAAGCGGCAAGATTGTCGAG
CAAGCCATGCAGAAAGGAGGGACCGAAGGAATTTTAGCTTGGATCCGGTC
CTTGGAGCCCTCCTTAAGAAACAATGTGCCGTTCACTCGCGCTTTGGCTT
ATCGACTTCTCGTAGAGTGCCCGAAGGTGAGGAATTCCACATGGCCGCAG
CCTGCAGAGCTCCAAACGCTTTTCACAGAGATTGCTGCCAACGCCGACCC
ACGCTTGCAGGTGGCATGCTTGCACGGCATGCAACGCTTCGTGATCGAAT
TCGCAGCTACGCAAGAGAAGAAGGCTATGCTGGTCAGTCTTTTCGACGAG
CTGGTCCGCTCCGGAGCAGTCTTGCCAGGCACACTGTCCGCCTGGGAGCA
AGACCTTGGTAGTACCCCTGACAGCGCACTTGCCTCCGACGTAGTTGTTG
ACGTGATGAATAAGTTGGGGGCCGACCCTGTTGTGACATGA back to topprotein sequence of rna1989 >rna1989-protein ID=rna1989-protein|Name=rna1989|organism=Nannochloropsis gaditana|type=polypeptide|length=96bp
MHLHTERLRRWQEQLCVVQLSGCSLTFRLGNVKKGVGLANISTIDFRALC
WHLNSPLSIHVTAPGRRFVLHPQACAQWNKVVLVLLSVSVDVRKLA back to topmRNA from alignment at CM002458.1:635583..635999+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1989 ID=rna1989|Name=rna1989|organism=Nannochloropsis gaditana|type=mRNA|length=417bp|location=Sequence derived from alignment at CM002458.1:635583..635999+ (Nannochloropsis gaditana)
ATGCATCTGTGAGCATGTAATTTTTAATCGGTGCATGCACACCCAGTACG
TACCGCAGCAGACATACTGAGCGACTACGTCGGTGGCAAGAGCAGCTGTG
TGTCGTACAGCTCTCAGGCTGTTCCTTGACATTCAGGTTGGGGAACGTAA
AAAAAGGTGTTGGGTTAGCGTAGTCATACTTTACAGAGAGGACATCCCGC
TCCTGGAACCTAAATGTTAAATTATTAGTGTTAAGTTCCTAGTAACATCT
CAACGATAGATTTTCGCGCTTTGTGCTGGCATTTAAATTCTCCTTTGTCG
ATCCATGTCACCGCTCCAGGCCGCCGGTTTGTCCTTCATCCCCAAGCGTG
TGCCCAGTGGAATAAAGTGGTGCTGGTACTCCTCTCTGTCTCTGTCGATG
TCAGGAAGCTTGCTTGA back to topCoding sequence (CDS) from alignment at CM002458.1:635583..635999+ >rna1989 ID=rna1989|Name=rna1989|organism=Nannochloropsis gaditana|type=CDS|length=873bp|location=Sequence derived from alignment at CM002458.1:635583..635999+ (Nannochloropsis gaditana)
ATGCATCTACATACTGAGCGACTACGTCGGTGGCAAGAGCAGCTGTGTGT
CGTACAGCTCTCAGGCTGTTCCTTGACATTCAGGTTGGGGAACGTAAAAA
AAGGTGTTGGGTTAGCTAACATCTCAACGATAGATTTTCGCGCTTTGTGC
TGGCATTTAAATTCTCCTTTGTCGATCCATGTCACCGCTCCAGGCCGCCG
GTTTGTCCTTCATCCCCAAGCGTGTGCCCAGTGGAATAAAGTGGTGCTGG
TACTCCTCTCTGTCTCTGTCGATGTCAGGAAGCTTGCTTGAATGCATCTA
CATACTGAGCGACTACGTCGGTGGCAAGAGCAGCTGTGTGTCGTACAGCT
CTCAGGCTGTTCCTTGACATTCAGGTTGGGGAACGTAAAAAAAGGTGTTG
GGTTAGCTAACATCTCAACGATAGATTTTCGCGCTTTGTGCTGGCATTTA
AATTCTCCTTTGTCGATCCATGTCACCGCTCCAGGCCGCCGGTTTGTCCT
TCATCCCCAAGCGTGTGCCCAGTGGAATAAAGTGGTGCTGGTACTCCTCT
CTGTCTCTGTCGATGTCAGGAAGCTTGCTTGAATGCATCTACATACTGAG
CGACTACGTCGGTGGCAAGAGCAGCTGTGTGTCGTACAGCTCTCAGGCTG
TTCCTTGACATTCAGGTTGGGGAACGTAAAAAAAGGTGTTGGGTTAGCTA
ACATCTCAACGATAGATTTTCGCGCTTTGTGCTGGCATTTAAATTCTCCT
TTGTCGATCCATGTCACCGCTCCAGGCCGCCGGTTTGTCCTTCATCCCCA
AGCGTGTGCCCAGTGGAATAAAGTGGTGCTGGTACTCCTCTCTGTCTCTG
TCGATGTCAGGAAGCTTGCTTGA back to top
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