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Properties
| Property Name | Value |
|---|
| Product | FUN14 family protein |
| Orig transcript id | gnl|cribi|Naga_100002g36.4900.mrna |
| Orig protein id | gnl|cribi|Naga_100002g36.4900 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:619897..620837 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1982 ID=rna1982|Name=rna1982|organism=Nannochloropsis gaditana|type=mRNA|length=1471bp
ATGAATGATCAACACAGCATTCCGGCAGTGCGACGTACTTAAAGATAAGC
CACTCTGTGCGTCACTGTACTTTGTATGGTTCACGCAGGTCGTCCAGGCG
CATCGGCGCCGCCTTCCGTCTAGGGGGTACGTGTCTCGCAGGCAGGTATC
CTCCGAGGCGGGGGCGGTGGCTCCCGCAGGGGCACGACGGCGAGCGCAGG
CGAGCACTCCCACCTAACTACGCGTCGTCCTAAGCTATTCAATCGCGTGA
AACTCATCAAGTGCCCTATTGGACTACCTATTTGTTCGTTTCAACACTTA
GAAAACACTGGGGAAAATCACAGCGAAAATAAAGGCGTGGCACGGGCATA
GAGAAGGCGAAATCTGAAGCCCGAGAACGAGACCTGAACAGGGACTTCAA
GCACGCAGCAGCAGCAGGCGAACAGCTCCCTGAGTGTCCTCCTATCGTGT
ATGCTCTGTATGTCCTTCTGAGTGTTCCCTCTGCATTATATTCTTGTACA
AGCCGAAATGAAGGGCGGGGATGAGATCGCCCTTGATAGCACGATGCCGA
GTACAGGCAGGAAAGAAGCAAAGGACACGAAAAGGAAGAAGAGAAAGCGG
ACCAAGATCACTGAGCAGGAGACGCCAGAGGAGGTCTCTGCTGCTCGAGA
TCCCCAAAAACAAATACCGGTGTCACGTGCGGGGTTCACGGCGCAGGCGA
AAGCTCGGTTTCCGGAGCTGACGCCTGTTCAGTGGGAGAGGCTCGAGCGC
CTCGGAGCCCTCGTACAAGAGTGGAACTGTAAGGTGAACGTCATCAGCAG
AAAAGACGTGGAGAATGTGCTTTCACACCACGTGCTTCCCTGCATGGGGA
TATCAAAACTTTTGTCCAAGGCAGCAGAGGGCACAAAAGTGATGGACGTT
GGGACGGGGGGGGGCTTCCCGGGCCTCCCCCTGGCCATTTGCTGTCCGCA
AGTCAAGTTCTGGCTGGTGGATTCGATAGGGAAGAAGGTGCGAGTCGTTG
GTGACATGGCTGTCCGCCTGGGTCTCCAAAACGTGAGGGTGCGGCACACT
CGGGTGGAAGAAGTCCGCGAGAGATTCAATTTCGTTACGGGCCGCTCCGT
GACGGCCATGCCTCGCTTCGTCGGCTGGGTGAAGGACAAGCTTCATGCAG
CACCTTCCGCGCCTTTAAAAGGGGTTCCAGACGATGGTATCTTGTATATC
AAGGGCGGTGTCAGCGACGAGACCCAGGAAGAAGACTTAGGCGGGTGGAT
GCCGACGGGGAGGTATCCAATCGGCGAGTTGATTGGCGGGGACGTCTACG
GTGGGGACAAGAGCGTCCTACATTTCTCTGTGCAGGACTTACGCCGCGGA
CCCGATGCGAATGCAAAAGGGCGGGGTGGAAACGTTCGTAGATAAGAGCT
GGTTGAGAAGCGTGGAAGGAACGTAACCAAGGAGTCGTTGCTAGCCCAAG
TACCCGAGCATCGGCATCACC back to topprotein sequence of rna1982 >rna1982-protein ID=rna1982-protein|Name=rna1982|organism=Nannochloropsis gaditana|type=polypeptide|length=265bp
MTVPNVEFSLLTSLKLQALEATKVFSSSEMSPARRPRRVRTPARLSTLIT
LWGFALLMARSTDLIADAVSPARLLKTFVEQQQQHREGLIKTKWDGNYCS
GPASLSTRSALRARNGMISASTCASSVKKRVERPIRIVERRAFIGGGDGG
GLTDVWGVSNGNRGLSRQVSCLASDMGLSGLGGMAAGYAAKRFGRLLSFA
CGFVLVSMKVAEELGYVAVDWEKIEGDARRIDGEKEDCAERDKYKFRCAE
YVRLLDNCVEQRYTN back to topmRNA from alignment at CM002458.1:619897..620837- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1982 ID=rna1982|Name=rna1982|organism=Nannochloropsis gaditana|type=mRNA|length=941bp|location=Sequence derived from alignment at CM002458.1:619897..620837- (Nannochloropsis gaditana)
ATGACGGTCCCCAATGTTGAATTTTCTCTTCTTACTTCTTTAAAGCTTCA
GGCTCTGGAGGCGACAAAAGTCTTCTCGAGTTCCGAGATGTCTCCTGCAA
GAAGGCCGCGACGAGTGAGAACCCCGGCACGGCTCAGCACGCTGATAACT
CTATGGGGTTTCGCTCTGTTGATGGCGCGGTCCACCGACCTGATCGCAGA
TGCTGTCTCCCCTGCACGACTTCTGAAGACCTTTGTGGAGCAGCAGCAGC
AGCATCGCGAAGGTTTGATAAAGACGAAGTGGGACGGCAATTATTGTTCT
GGACCGGCGTCTTTGTCTACCAGGTCGGCACTGCGAGCCAGAAACGGGAT
GATTTCTGCGTCCACGTGCGCAAGTTCTGTCAAAAAACGTGTAGAGAGAC
CGATTCGCATTGTGGAAAGGAGGGCTTTTATTGGGGGAGGCGACGGTGGA
GGTTTGACAGACGTTTGGGGTGTAAGTAACGGGAATAGGGGGCTCTCAAG
GCAGGTCAGCTGCTTGGCCAGTGATATGGGTCTGAGTGGACTTGGAGGCA
TGGCAGCAGGCTATGCAGCCAAAAGATTTGGGAGATTGTTAAGTTTTGCG
TGTGGCTTCGTGCTGGTGTCCATGAAGGTCGCCGAGGAGCTCGGGTACGT
AGCCGTGGACTGGGAGAAGATCGAGGGCGACGCCCGCCGGATCGGTGGGT
CTGTGTGGGGCGATAACGGAGTGGTTCGGCGGAGGGCGAGGAGGCTTACC
CGCTCATGGCAGGTGGAGTTAGGGCCCAACGCTGGTATCGCGGGCTCCTT
CCTGACAGGCTTTGTCTACGCATTTAATGTGACATAGACGGGGAGAAAGA
GGACTGTGCAGAGCGCGACAAATATAAGTTTCGATGCGCAGAGTACGTGC
GGCTGTTAGATAATTGTGTAGAGCAAAGATATACAAACTAA back to topCoding sequence (CDS) from alignment at CM002458.1:619897..620837- >rna1982 ID=rna1982|Name=rna1982|organism=Nannochloropsis gaditana|type=CDS|length=1596bp|location=Sequence derived from alignment at CM002458.1:619897..620837- (Nannochloropsis gaditana)
ACGGGGAGAAAGAGGACTGTGCAGAGCGCGACAAATATAAGTTTCGATGC
GCAGAGTACGTGCGGCTGTTAGATAATTGTGTAGAGCAAAGATATACAAA
CTAAATGACGGTCCCCAATGTTGAATTTTCTCTTCTTACTTCTTTAAAGC
TTCAGGCTCTGGAGGCGACAAAAGTCTTCTCGAGTTCCGAGATGTCTCCT
GCAAGAAGGCCGCGACGAGTGAGAACCCCGGCACGGCTCAGCACGCTGAT
AACTCTATGGGGTTTCGCTCTGTTGATGGCGCGGTCCACCGACCTGATCG
CAGATGCTGTCTCCCCTGCACGACTTCTGAAGACCTTTGTGGAGCAGCAG
CAGCAGCATCGCGAAGGTTTGATAAAGACGAAGTGGGACGGCAATTATTG
TTCTGGACCGGCGTCTTTGTCTACCAGGTCGGCACTGCGAGCCAGAAACG
GGATGATTTCTGCGTCCACGTGCGCAAGTTCTGTCAAAAAACGTGTAGAG
AGACCGATTCGCATTGTGGAAAGGAGGGCTTTTATTGGGGGAGGCGACGG
TGGAGGTTTGACAGACGTTTGGGGTGTAAGTAACGGGAATAGGGGGCTCT
CAAGGCAGGTCAGCTGCTTGGCCAGTGATATGGGTCTGAGTGGACTTGGA
GGCATGGCAGCAGGCTATGCAGCCAAAAGATTTGGGAGATTGTTAAGTTT
TGCGTGTGGCTTCGTGCTGGTGTCCATGAAGGTCGCCGAGGAGCTCGGGT
ACGTAGCCGTGGACTGGGAGAAGATCGAGGGCGACGCCCGCCGGATCGAC
GGGGAGAAAGAGGACTGTGCAGAGCGCGACAAATATAAGTTTCGATGCGC
AGAGTACGTGCGGCTGTTAGATAATTGTGTAGAGCAAAGATATACAAACT
AAATGACGGTCCCCAATGTTGAATTTTCTCTTCTTACTTCTTTAAAGCTT
CAGGCTCTGGAGGCGACAAAAGTCTTCTCGAGTTCCGAGATGTCTCCTGC
AAGAAGGCCGCGACGAGTGAGAACCCCGGCACGGCTCAGCACGCTGATAA
CTCTATGGGGTTTCGCTCTGTTGATGGCGCGGTCCACCGACCTGATCGCA
GATGCTGTCTCCCCTGCACGACTTCTGAAGACCTTTGTGGAGCAGCAGCA
GCAGCATCGCGAAGGTTTGATAAAGACGAAGTGGGACGGCAATTATTGTT
CTGGACCGGCGTCTTTGTCTACCAGGTCGGCACTGCGAGCCAGAAACGGG
ATGATTTCTGCGTCCACGTGCGCAAGTTCTGTCAAAAAACGTGTAGAGAG
ACCGATTCGCATTGTGGAAAGGAGGGCTTTTATTGGGGGAGGCGACGGTG
GAGGTTTGACAGACGTTTGGGGTGTAAGTAACGGGAATAGGGGGCTCTCA
AGGCAGGTCAGCTGCTTGGCCAGTGATATGGGTCTGAGTGGACTTGGAGG
CATGGCAGCAGGCTATGCAGCCAAAAGATTTGGGAGATTGTTAAGTTTTG
CGTGTGGCTTCGTGCTGGTGTCCATGAAGGTCGCCGAGGAGCTCGGGTAC
GTAGCCGTGGACTGGGAGAAGATCGAGGGCGACGCCCGCCGGATCG back to top
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