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Properties
| Property Name | Value |
|---|
| Product | udp-sugar transporter ust74c |
| Orig transcript id | gnl|cribi|Naga_100002g39.4867.mrna |
| Orig protein id | gnl|cribi|Naga_100002g39.4867 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:615057..617104 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1979 ID=rna1979|Name=rna1979|organism=Nannochloropsis gaditana|type=mRNA|length=2196bp
GACGCGAAACCTATGAATGCATAACAATCACAGCGCGGACAAAGCTGGGC
GCTGCAGAGAACTCGAGAACATCGCGTATGACAGCTTACTCATATTCGTC
GGGGGCATGGCGAAGAAGCATTTTTCGCATCGAACAGCTACTCCGCGCCA
CTATTGTGACCATCATTGTACTTACAAAGTCACGCGTGGACGCTGAGGAC
GTGCTGAGACTCGGAGGTAACAGAGAAACGTGTTTCGGCAGATCGCGGGT
CCAATGGGTTGCAGTGAAAGGGAAAAACAGGAATCTCCATCACACACAAA
CCTCCCCCATCAAATTGATGTTTTATACTCCGCAGATGAAATTGATCATC
GGAACGTGCCACCAATGGGGAATTTTTTTAATCTGAGCCATGATCGAATT
GAAGGGGTGAGTTGGTACGCCAATGATCGGATCCAGGGTCTCCTTACAGA
GGCACATGTGGGCAAGGCAGATAGCTTCCAGAGTGAGGAAGCGAGTGCTG
GCAGTCAGAGGGGTGGCACCCAACACCATCCTTTTTGGCCATTGCAGAGA
AATGATGTAATTGGATTGTTTCTCACAGCTGTTGGACTTATGATAGCAGC
GGGAGGCGGGATAGGTGGTGGTGGGATTCTGGTGCCAATTTTCATTCTTG
TCATGGGGTTTAGCCCCAAATACGCAATTCCTCTATCAAATGTGACAATC
TTGGGAGGATCGATCATGAACATGGTGATGAATGTCCCTAAGCGGCACCC
TTCGGCAGATCGACCTCTGGTCGATTGGGACCTCATTCTCATCATGGAGC
CTCTTACTATTGGAGGCGCGCTTGCTGGCAGCTTTCTCAACAAAATCTTA
CCGGAGTGGCTGCTGGTCATCTGTTTGGTGATTCTCCTAACCTATACAGC
GCAAAGCACCTTGAAAAAGGGGCTCCGTGTGTATCAAAAAGAGAGTCAGG
CCATGGCTCAGGCCAGCCGACCCCAGTCAAAGCAACTAAAGGACTTGGCA
GCCGCGGAAAAAAATTATGAGGACGATGAAGAAAAAACCTTGCTACTTTC
ACCTGATGAGTATGAAAATCCTCAAGACAACATCGCCAAAGCCGATTTGC
AGGCCATTCTGGACGAAGAAAGGGGGACGCCTTGGGTGAAAGTTCGACTT
TTGATATTTTGCTTCTTGGTTGTGCTTGTCCTGAATATCTTCAAGGGCGG
GGGCTCCTTTTCGTCGCCATTGGGAGTCGAGTGCGGTAGCTTCGCTTTCT
GGTTCTTGACCTCCATGGTCTTTGCCTGGGTCGTGTGTATATCGCTGTAC
GTGCGCGCGGATCTGATAAAAATGTATTACCTGAAAGCCAAAATTGGTTA
CAAGTACGCTAAGGGCGATATCGAATGGAACGAGTGGGCCACGATAAAGT
ACCCCTGCGTATGTTTTTTCGCGGGTTTTTTCGCAGGCATGTTTGGTGTT
GGCGGTGGAATCGTCAAGGGTCCTTTAATGCTGGAAATGGGGGTGGACCC
GCAGGTTGCTGCCGCATCCTCCGCCTGTATGATCCTATTCACATCCTTCA
CGGCCACTACAAGTTTTTACATCTTTGACCTTCTCATCTATGACTATGCT
GTGTGGCTTTTTATAATTGGATTTTTGTTCACGTCGGTAGGTCAATATGG
CCTTAGTTATCTTATGAAGCGGTATAACCGCAACTCGTATATTATATTTT
CCATTGGTGCGGTCGTTGGTTTGTCAGCTCTACTCATGGGTCTACAAAGC
ATCATCTCGCTTTTCTCGGGTCCAGGGTCCGGGGGAAAGGCAGGGGGCGC
TATATGTGATGCAGCTGAATAGGCGGACATGAATGAGTCTTGAAAGGCCA
CGAGGCGAGGTAACAGCAATGGTATATCCGTTGCGATCTTAACCTCGTCT
ATCGACGTGACTGGGAAATAGGCGAGATGTGGTTATATTTTCAGGAAATT
CGACATTCCTGTCGGCATCTTCATCACGTGTGTGAATAGCGTAGCATCAA
AGAATCAAACAGGAGCTACGGAAGTCATACTTAAAGAGTAAAAATAAAGG
TCCTCACACGAGAGTCACCGGATTTGAAAAATTAGAAACGGTCGTGTACT
CATCGATTGTATGGATCTCTAAATTCTGTGTGCCTTCATGTTTTGGATTT
AAAGTTCTACGCGACATATCACAAAATTATTCTCCCTCCAAACTGA back to topprotein sequence of rna1979 >rna1979-protein ID=rna1979-protein|Name=rna1979|organism=Nannochloropsis gaditana|type=polypeptide|length=413bp
MFREGGSLKLPPRTALVSATAKAQVPRKHLDSNQDQRLMAYTGEPTSTSA
QKLGSALFFALTSFSIIFVNKALLASPAHGFLGFPSFFAVAACQYVFTGG
LLLALKLRGRVDIPELSSNVLRCLWPLALVGSLNVLCGLGGTQKISLPMF
TVLRRFSIPMTMGLEWLLLGVAASRSVQFSVFLMVFGAVLAGLADMSFDP
VGYLFIFGNNIFTALNGVIMKRTLTSSNISKMAVLYYNSLFGAVFMTTLL
FCRPRELQAIKNFPSLKDPTFLIVFFLAAGTGSLLNYATFLCTHHNSALT
TTVVGCLKNLATTYFSMFFLPDYVFSWSNFWGVTVSVAGSVIYSYIELVK
QEKNARSKASDSSVSGISSENRGSKKVSQDEKSDCKLAESPVMAFKSMDF
RIENTCHSKDKAS back to topmRNA from alignment at CM002458.1:615057..617104+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1979 ID=rna1979|Name=rna1979|organism=Nannochloropsis gaditana|type=mRNA|length=2048bp|location=Sequence derived from alignment at CM002458.1:615057..617104+ (Nannochloropsis gaditana)
AAAGTGGCTGCATCAGATCGGGAGATCACATTTTTTTTACCGCTTCTCAT
CGCCGACAAGTAAGAGAAGACGGATTATGGCTCGTATGCGAGCACGGTAT
AATCGACCCTGCTCTTCCCACGTTAATGAGAAGTGTTTCATCCATTCTCT
CCTTTATGTTTACATTTTGCATTTTAAAATAGTTTTGTTATATTAGGGAG
GCCAGAGGCCTCTTTTTGCGTCAAGTCTGAAGGCACTTTTTGCGGGACCC
GCGATGTTCAGAGAGGGCGGTTCTTTGAAGCTTCCCCCACGTACAGCTTT
GGTTTCAGCAACAGCGAAGGCTCAGGTGCCCAGAAAACATCTCGATTCGA
ATCAGGATCAAAGATTGATGGCATATACGGGCGAACCTACCTCTACGTCC
GCGCAGAAGCTTGGTAGCGCACTATTTTTTGCCCTTACCTCCTTCTCAAT
TATCTTTGTCAACAAAGCTTTGCTAGCTTCTCCTGCGCATGGTTTCTTGG
GATTCCCATCATTTTTTGCTGTCGCTGCATGTCAATACGTCTTCACGGGA
GGACTTTTATTGGCGTTGAAATTGCGCGGTCGTGTGGATATTCCGGAACT
CTCCTCGAACGTGCTGCGGTGCCTGTGGCCACTAGCCTTGGTCGGCTCAT
TAAATGTTCTTTGCGGCCTAGGCGGTACACAAAAGATTTCTCTGCCCATG
TTTACTGTGCTACGACGCTTCTCTATACCCATGACAATGGGCCTAGAATG
GCTTTTATTAGGCGTAGCCGCTTCGAGGTCTGTGCAATTTAGCGTATTTT
TGATGGTGTTTGGCGCTGTTTTGGCGGGTCTCGCTGACATGTCTTTTGAT
CCTGTGGGCTACCTGTTCATTTTCGGTAATAATATTTTTACGGCCTTAAA
TGGAGTGATCATGAAGCGGACTTTGACATCCTCTAATATCAGCAAAATGG
CTGTGTTGTACTACAATAGCCTTTTCGGGTGCGTAAACGACATACTCCAC
CCCTCACGTTTATATTTGAACTTCAATAAAATTGTCCTCTTATCTCTTTA
CAATTCAATAACTTTCCATTTCGCCACGTACAGAGCTGTTTTCATGACTA
CTCTACTCTTCTGTCGTCCGAGGGAGCTGCAAGCAATCAAGAATTTCCCC
TCTTTGAAAGATCCCACATTTCTGATTGTCTTCTTTCTCGCAGCAGGGAC
GGGCTCATTATTGAACTATGCCACATTCCTCTGCACGCATCACAATAGCG
CCCTCACCACTACCGTCGTGGGTTGCCTCAAGAACCTTGGTCAGTGCTTT
TGTATTTGAAACCTTGACTATACCCGCCGACCTAGTGCTATACTGTCATA
AACACCTGTCTTATTACCTCTTTCCAATCAATTTACCGTCGCACTCCCAT
TTTTGTTGTAGCCACAACATACTTTTCAatgttcttcctcccggaCTACG
TCTTTAGCTGGAGCAATTTTTGGGGCGTCACCGTATCTGTGGCGGGTAGT
GTGATATATTCATACATTGAACTCGtgaagcaagaaaaaaatgcacGTAG
CAAGGCCTCCGACAGCAGCGTCAGCGGTATTTCAAGCGAAAATAGAGGCA
GTAAGAAAGTCTCCCAAGACGAGAAAAGCGATTGCAAGCTTGCCGAAAGC
CCAGTGATGGCATTCAAAAGCATGGATTTTCGCATCGAAAATACTTGTCA
CAGTAAAGATAAAGCCTCATgatattttaaaaaaagagcTTGCACGACGA
GAGCTGCTGATGAAGCCCCCGTAAAACTGATCGCTCTTCCCTGCAATGCA
AATTTGATGCTTCTTCGACTTACGTGAGACTTGCCTGCTGCCCTGCATGA
GCTCGCTTCCAACCCCGGCATGTCCCCGCTGACCATCTCTCAGACCTGAC
GAGGGCCACGATGCCAAACTAAGGAGCGGACAATACTGGCCACAGCCAAT
AGCCGCTCCTGATGATGGGGACTGCATGTCACCGCCGTTTTACCGTAACT
CGACTTTCAACGCATCTGACATTTGAGTGcgaacctcctcctgtaAGA back to topCoding sequence (CDS) from alignment at CM002458.1:615057..617104+ >rna1979 ID=rna1979|Name=rna1979|organism=Nannochloropsis gaditana|type=CDS|length=3726bp|location=Sequence derived from alignment at CM002458.1:615057..617104+ (Nannochloropsis gaditana)
ATGTTCAGAGAGGGCGGTTCTTTGAAGCTTCCCCCACGTACAGCTTTGGT
TTCAGCAACAGCGAAGGCTCAGGTGCCCAGAAAACATCTCGATTCGAATC
AGGATCAAAGATTGATGGCATATACGGGCGAACCTACCTCTACGTCCGCG
CAGAAGCTTGGTAGCGCACTATTTTTTGCCCTTACCTCCTTCTCAATTAT
CTTTGTCAACAAAGCTTTGCTAGCTTCTCCTGCGCATGGTTTCTTGGGAT
TCCCATCATTTTTTGCTGTCGCTGCATGTCAATACGTCTTCACGGGAGGA
CTTTTATTGGCGTTGAAATTGCGCGGTCGTGTGGATATTCCGGAACTCTC
CTCGAACGTGCTGCGGTGCCTGTGGCCACTAGCCTTGGTCGGCTCATTAA
ATGTTCTTTGCGGCCTAGGCGGTACACAAAAGATTTCTCTGCCCATGTTT
ACTGTGCTACGACGCTTCTCTATACCCATGACAATGGGCCTAGAATGGCT
TTTATTAGGCGTAGCCGCTTCGAGGTCTGTGCAATTTAGCGTATTTTTGA
TGGTGTTTGGCGCTGTTTTGGCGGGTCTCGCTGACATGTCTTTTGATCCT
GTGGGCTACCTGTTCATTTTCGGTAATAATATTTTTACGGCCTTAAATGG
AGTGATCATGAAGCGGACTTTGACATCCTCTAATATCAGCAAAATGGCTG
TGTTGTACTACAATAGCCTTTTCGGAGCTGTTTTCATGACTACTCTACTC
TTCTGTCGTCCGAGGGAGCTGCAAGCAATCAAGAATTTCCCCTCTTTGAA
AGATCCCACATTTCTGATTGTCTTCTTTCTCGCAGCAGGGACGGGCTCAT
TATTGAACTATGCCACATTCCTCTGCACGCATCACAATAGCGCCCTCACC
ACTACCGTCGTGGGTTGCCTCAAGAACCTTGCCACAACATACTTTTCAat
gttcttcctcccggaCTACGTCTTTAGCTGGAGCAATTTTTGGGGCGTCA
CCGTATCTGTGGCGGGTAGTGTGATATATTCATACATTGAACTCGtgaag
caagaaaaaaatgcacGTAGCAAGGCCTCCGACAGCAGCGTCAGCGGTAT
TTCAAGCGAAAATAGAGGCAGTAAGAAAGTCTCCCAAGACGAGAAAAGCG
ATTGCAAGCTTGCCGAAAGCCCAGTGATGGCATTCAAAAGCATGGATTTT
CGCATCGAAAATACTTGTCACAGTAAAGATAAAGCCTCATgaATGTTCAG
AGAGGGCGGTTCTTTGAAGCTTCCCCCACGTACAGCTTTGGTTTCAGCAA
CAGCGAAGGCTCAGGTGCCCAGAAAACATCTCGATTCGAATCAGGATCAA
AGATTGATGGCATATACGGGCGAACCTACCTCTACGTCCGCGCAGAAGCT
TGGTAGCGCACTATTTTTTGCCCTTACCTCCTTCTCAATTATCTTTGTCA
ACAAAGCTTTGCTAGCTTCTCCTGCGCATGGTTTCTTGGGATTCCCATCA
TTTTTTGCTGTCGCTGCATGTCAATACGTCTTCACGGGAGGACTTTTATT
GGCGTTGAAATTGCGCGGTCGTGTGGATATTCCGGAACTCTCCTCGAACG
TGCTGCGGTGCCTGTGGCCACTAGCCTTGGTCGGCTCATTAAATGTTCTT
TGCGGCCTAGGCGGTACACAAAAGATTTCTCTGCCCATGTTTACTGTGCT
ACGACGCTTCTCTATACCCATGACAATGGGCCTAGAATGGCTTTTATTAG
GCGTAGCCGCTTCGAGGTCTGTGCAATTTAGCGTATTTTTGATGGTGTTT
GGCGCTGTTTTGGCGGGTCTCGCTGACATGTCTTTTGATCCTGTGGGCTA
CCTGTTCATTTTCGGTAATAATATTTTTACGGCCTTAAATGGAGTGATCA
TGAAGCGGACTTTGACATCCTCTAATATCAGCAAAATGGCTGTGTTGTAC
TACAATAGCCTTTTCGGAGCTGTTTTCATGACTACTCTACTCTTCTGTCG
TCCGAGGGAGCTGCAAGCAATCAAGAATTTCCCCTCTTTGAAAGATCCCA
CATTTCTGATTGTCTTCTTTCTCGCAGCAGGGACGGGCTCATTATTGAAC
TATGCCACATTCCTCTGCACGCATCACAATAGCGCCCTCACCACTACCGT
CGTGGGTTGCCTCAAGAACCTTGCCACAACATACTTTTCAatgttcttcc
tcccggaCTACGTCTTTAGCTGGAGCAATTTTTGGGGCGTCACCGTATCT
GTGGCGGGTAGTGTGATATATTCATACATTGAACTCGtgaagcaagaaaa
aaatgcacGTAGCAAGGCCTCCGACAGCAGCGTCAGCGGTATTTCAAGCG
AAAATAGAGGCAGTAAGAAAGTCTCCCAAGACGAGAAAAGCGATTGCAAG
CTTGCCGAAAGCCCAGTGATGGCATTCAAAAGCATGGATTTTCGCATCGA
AAATACTTGTCACAGTAAAGATAAAGCCTCATgaATGTTCAGAGAGGGCG
GTTCTTTGAAGCTTCCCCCACGTACAGCTTTGGTTTCAGCAACAGCGAAG
GCTCAGGTGCCCAGAAAACATCTCGATTCGAATCAGGATCAAAGATTGAT
GGCATATACGGGCGAACCTACCTCTACGTCCGCGCAGAAGCTTGGTAGCG
CACTATTTTTTGCCCTTACCTCCTTCTCAATTATCTTTGTCAACAAAGCT
TTGCTAGCTTCTCCTGCGCATGGTTTCTTGGGATTCCCATCATTTTTTGC
TGTCGCTGCATGTCAATACGTCTTCACGGGAGGACTTTTATTGGCGTTGA
AATTGCGCGGTCGTGTGGATATTCCGGAACTCTCCTCGAACGTGCTGCGG
TGCCTGTGGCCACTAGCCTTGGTCGGCTCATTAAATGTTCTTTGCGGCCT
AGGCGGTACACAAAAGATTTCTCTGCCCATGTTTACTGTGCTACGACGCT
TCTCTATACCCATGACAATGGGCCTAGAATGGCTTTTATTAGGCGTAGCC
GCTTCGAGGTCTGTGCAATTTAGCGTATTTTTGATGGTGTTTGGCGCTGT
TTTGGCGGGTCTCGCTGACATGTCTTTTGATCCTGTGGGCTACCTGTTCA
TTTTCGGTAATAATATTTTTACGGCCTTAAATGGAGTGATCATGAAGCGG
ACTTTGACATCCTCTAATATCAGCAAAATGGCTGTGTTGTACTACAATAG
CCTTTTCGGAGCTGTTTTCATGACTACTCTACTCTTCTGTCGTCCGAGGG
AGCTGCAAGCAATCAAGAATTTCCCCTCTTTGAAAGATCCCACATTTCTG
ATTGTCTTCTTTCTCGCAGCAGGGACGGGCTCATTATTGAACTATGCCAC
ATTCCTCTGCACGCATCACAATAGCGCCCTCACCACTACCGTCGTGGGTT
GCCTCAAGAACCTTGCCACAACATACTTTTCAatgttcttcctcccggaC
TACGTCTTTAGCTGGAGCAATTTTTGGGGCGTCACCGTATCTGTGGCGGG
TAGTGTGATATATTCATACATTGAACTCGtgaagcaagaaaaaaatgcac
GTAGCAAGGCCTCCGACAGCAGCGTCAGCGGTATTTCAAGCGAAAATAGA
GGCAGTAAGAAAGTCTCCCAAGACGAGAAAAGCGATTGCAAGCTTGCCGA
AAGCCCAGTGATGGCATTCAAAAGCATGGATTTTCGCATCGAAAATACTT
GTCACAGTAAAGATAAAGCCTCATga back to top
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