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Properties
| Property Name | Value |
|---|
| Product | fucosyltransferase |
| Orig transcript id | gnl|cribi|Naga_100013g21.9747.mrna |
| Orig protein id | gnl|cribi|Naga_100013g21.9747 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:512466..514187 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna196 ID=rna196|Name=rna196|organism=Nannochloropsis gaditana|type=mRNA|length=3629bp
GTTTCCTTTCCTCAAATTGTATCATCGTTCTGTACATGCATCACAGGCAA
CATCACCCCACACATGCGTCGCTTATAAATCGCAGCACATGGGATGACAA
AAAACAGGAAATGGCTGCCATCCCAGATCCTTCAGTGACCTCTATTCATC
CGAGTGCAGCTCGTTTGAGCAAAGCAGCGTTCCTGGACGTGTACGCTGCA
TACGGATATCGAGAGATCACCCAGGACAATGGCGGCAGTGCCGCCCCATG
CGCCTTCAACATCGAAAAGCAGGCGGAACCGGGGAAGTTTCAGGAGTCTG
CGAGGACGACACTTTGCAGGGACGTTGAACCAAATCCTGGCTCCAGCTTA
TGTAGTAAGCCCACACACGGAAAGCTGATTGTGGGCGCGCTTGAGCACGC
CCGGCAGGACTCCGCAACCCCTACTCCTTGTTCAGATGCGGAGCTCGTAC
CCGTCGACACGTTACGACGGCAAGAATTTCCTGCCCTTTATCATCCTCGT
GAAAATCCTCAGGGCGCTATTTATCTGGATCATGCTGGAGCCACATTGTA
CGCTCAATCGCAGATAGCCCGTTGTCATTCCCACTTGCAAGAAAGCATAT
TTGGTAACCCACATAGCAAGGGGCCCGTGGCAAGTGCCACTGCAGATTTA
GTGGAGGAGGCGCGCAGCTCTGTGCTTGCCCATTTTCACGCCCCTCCTGA
GGACTGGACCGTGGTCTTCACATCAGGCGCCACAGCAGCACTCAAGATGG
CCGCCGAGCTCTTCCCCTGGCGCGGACACGGGACAAGTCGGTTGATCTAC
GCGCACAACGCCCACACCAGTGTCTTGGGTATGCGGGAAATAGCGCTGGA
GGCTGGAGCGGGTTTTGCCTGTTTGCCACCCTCTGTCCAGTACGGAGAGA
AGGCCGATGTGGCCCTGGCGGCTGCTCTGCACGAAGCAATGCACCAGACT
GGCTCCTCTTCCCCATTCCCCCGTCACGAGAATGGCGTCAGCACAGAAGA
CGGACCCACCGAGACGTTTCCCGAGACAGAGCATTTGCTGGTGTTCCCTG
CCGAGTGCAACTTCTCCGGGCGGACGCTGGACTGGGCACGTTTGCGGCAG
GCCCTGGCGCGGCTTCGGACCACCGACGCAGAGCAGCGCGTGAGCGTGCT
ACTGGACGCCGCAAAGTATGTGGGTACAAGCCCTCTGGACCTGGGCTCGT
TCCAAGAAGGGGAGGTGGACATGCTTTCTCTGAGCTTTTATAAATTATTC
GGGTACCCCACCGGGCTGGGCTGCCTCTTGGTGCGGTCGTCCCTCGCCCG
CCGCTGGCTCTCGGAGACCCGGGGGAGTTCCGCTGCCCCGCACATTCCTC
TCAACACCCACTCTTGCCATGTGCGCCGCCGGTATTTTGGTGGTGGGACC
GTGTTGGCTGCCGTACCCGAAACGGATTATCGACTCTTGCGGCCTGAGCC
AGCCAGGCGCTTGGCGGACGGCACGGAGGATTTCTTGGGCATTATTTCCC
TGAGAGAAGGGTTTCGTTTTCTCGACGAAGTCCTCGGGGGAATAGAACGC
GTCAGGGCACACACGTGGGCGCTGACGCGGTTCTGCTACGAGCAGCTCTC
AAGCCTTCGACATGCCAACGGGCAGCACGTGTGCGTCATGTACAGCTTGC
CTCCCGCCAGTCCTGCGCGGCAAGGACCAGTAGTCACGTTCAATGTGCGA
AGGGCAGACGGATCGATTGCCGGGTACTCGGAGGTGGAGAAAATCGCGAC
CTTGCATGGCATACAGCTTCGCACGGGCTGCTTTTGCAATCCGGGGGCTT
GTCAGGAGGCTCTCGGGCTGTCCGTGGAGGACGTGCAAGCGCAGCTGAAC
GCTGGGCATGTGTGTTGGGACGACAACGACTTGATAGAGGGAAGACCCAC
GGGGGCGGTGCGCGTCTCTTTTGGCTACATGTCGACCTGGGAAGACGTGA
CTGCATTTTTGCATGTAATCGACAAGTATTTTGTGAGCAAAACGGCCAAG
GCGGAGGCAGCGGACGCGTCGACACCCCCTTTCCTTGCACTATCGTTGGA
TAAAAAGGAACCCCTTGGGTCTCCCTCGACCTTAACACTGCGCCTTGGCA
GTATCTTTTTGTACCCCATCAAATCGTGCGCGGCAATGTCTGTTGAAGCA
TGGCCAGTCGGTCCCACGGGATTGCTTTTCGACCGAGAATGGGCCCTGGT
GGACGGGCACGGCCAGGCACTGCGTCTGAACAAGGTAGCCCAGATGCGGT
TCATAAGACCCCACGTTGATCTCGAGAGACAAGAGCTAGTGGTAGCGGCA
CCAGGGATGCCGGATCTTGTTCTCAGTGTCCGCCTTGTGCCCACTCCTGA
CCATGTCCGGGATGTGAGTGTATGTGGGGAGGCATGCCAAGGATTGGGCT
ATCAAGACGCTGCGGGCATAGACGCTTGGTTCACGAGGTTTCTCAAGCGA
AGTTGTAGCTTGGTGCGAGCGTGTCCGTACTCCCAGAAGCGCCGGTCCCG
AGCGGTTGTGGAGACTCACAGAACAGATCCTGTCGCGACGACGACAGGAG
ACAGGGCAGAGCGGAAGGAGATCAATTTCACCAACGAGGCCCAGTTTCTG
CTCATCTCCTCAGCATCGGTGGCCCATCTAAATGATCTCATTGCTCAGCA
AGTCGATTTGGACTACGCTCTCTGTTATGAGGGTGTGCGAAGCGACCGCT
GTTATGTGACATTAGAAAACTTCAGGCCCAATTTGGTGATTGACGGCGGT
GTGGCTCACCAAGAGGACTTATGGAAAAGCGTTGATGTCCTCCCCGGAGA
TAGAGATGAGGGTGGAGGCCAAAGAAGGGAGGTCGGTTTTAGAGAGATGG
GCGTGAGGCTTAAAGTAACGGGCCCTTGCGCGAGGTGTTCCATGGTAAAC
ATTGATCATCGTTGCGATCTGTCCGCGTCAAAGAAGGGCTTGGACCCGGC
GATGACGTCAGACGTCGAAAAAGTACTTCCGGCACAGGTAGCCCCCGTAC
TTAAAATGCTGGCTTCCTATCGGCGAGAAAAGGCGAACATTTACTTCGGG
CAGTTTTTAGCCTTTGATGACCTGGTTGGGAGAGGCTTTCAAGGATGGCT
ACGGACAGGAGCTGTTGTACAGGCCCAGCGGCGGTCCGGTGAGGGAGCAA
CATAAATGCGAAGAAATGTATCATTCAAAATAAGATGGCAAATGCATGCG
TAAATGTTCCTGGTGAGAATCACGTTTAGCTCTTAATTTGTGTACATGCG
AGAAACGAGGGGAGAAAGTCAGTCACATCGACAACAAGCTCTCATGCTAA
GTCTAAATTAGTGTATGCAACCGGCCACTCTCGGACGAAATTCGCTCCTG
ACGCGTAGAAATTTTTGCCTGGGGACTGCAAGGCATATTTGAACTTTTCA
AGATAATAGAACCCTGGATTCCTTCCAAGATAACCCCTCATACGTGTGAT
GAAGGCGGTAAACGTGGAAAAGTAGGTGCCCACGAACGTACGCGCCCCTG
AGGCGATTATTTGCTCTACCATACCCGTAAGGTTGGGATCCATATCTTCC
AATCCAGCCGCCTTGTAAAAGTCTTCGTAAAACCGGAGACGGTACAGATC
ACGTACAGGGTCGAAAAGCGTTGAGTTCT back to topprotein sequence of rna196 >rna196-protein ID=rna196-protein|Name=rna196|organism=Nannochloropsis gaditana|type=polypeptide|length=410bp
MVLQNAPDTILHSLKASLSAQISNQRSSEETHYAGFQEATSNLAAPEAVA
TELVSETLAVRSSFDVARKGGALQEFGDFYDISSWEKYLEVMPMHEYLKK
EGLTGGLKNKERPPGNATTFDRQKTLWDYIRRATDVFPVGPDAHVVAFGL
PAHVNTSKALHEYHPEADAIIDGRNLLCYGSDLHARKSLHFTSMYNGGKR
YLAHFYGFLYFADQKVDAFMKRFVRDHMHYRNDIFCRATKVIDLLRRNAS
DKNGGYDAIHIRRGDFQFKEARLDIEDIFKAVEDVIDPGSLVYIVTDEKN
STLFDPVRDLYRLRFYEDFYKAAGLEDMDPNLTGMVEQIIASGARTFVGT
YFSTFTAFITRMRGYLGRNPGFYYLEKFKYALQSPGKNFYASGANFVREW
PVAYTNLDLA back to topmRNA from alignment at CM002455.1:512466..514187- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna196 ID=rna196|Name=rna196|organism=Nannochloropsis gaditana|type=mRNA|length=1722bp|location=Sequence derived from alignment at CM002455.1:512466..514187- (Nannochloropsis gaditana)
ATGGTGTTGCAAAATGCTCCCGATACTATCCTACATAGCTTAAAGGCAAG
CCTTTCTGCTCAAATCAGCAACCAAAGGTCATCTGAAGAGACACATTATG
CTGGTTTTCAGGAAGCGACTTCAAATTTGGCAGCACCCGAAGCAGTAGCG
ACAGAACTTGTGAGCGAAACCTTGGCAGTTAGATCATCGTTTGATGTCGC
GAGAAAAGGTGGGATGTCAGATAGGAGCATGCACAACAACTCCGAAACAT
CTGTCCCTATCTCAAAGTCTCCCGAGAAAGAGGAGATGCAGAAGTCACTG
GATGGACCGAAGGAGGAATCAAATCAAACGTCCTCCGTCGCTTTTAGCGC
ATCTAAATCGCACTCTGAGAGTGAGGAAAGAAAGAGCCGAATATCGCCAC
GTGCAGCAGGTCCGAAAACTGAAGCCGCCATTCTCAGATGCCCGAACAGC
CCGATACGCAAGTCGGGGGAAGACGGCAGCATTGTCTATTGGAGAACGTG
GAGGGATGAAGAGCTTGCATGGTCAAGCTCATTTAAATCAAAGCACGGGG
AGGATCCTAAATACGTGACCTTCGAGCCTGACGAGGGCGGATTTAATAAC
ATACGAATGGCCTTGGAGATCGTCGTGGTCTTCGCCCTTGCCACCGGCCG
CACGCTGGTCCTTCCTGATGAATATCCAATGTATCTCTTGGGGAAAGGGG
GCGCGCTCCAGGAATTTGGCGATTTCTACGACATTTCTTCTTGGGAAAAA
TACTTGGAGGTGATGCCAATGCATGAATACTTGAAGAAAGAAGGACTGAC
TGGAGGCCTGAAGAATAAAGAGAGGCCGCCGGGGAATGCCACTACGTTTG
ACCGCCAAAAAACGTTATGGGATTACATTCGACGGGCAACAGATGTATTT
CCTGTTGGGCCCGATGCCCACGTCGTCGCTTTCGGACTCCCAGCGCATGT
CAATACCTCAAAGGCTCTGCATGAATATCATCCCGAAGCAGATGCCATTA
TCGACGGACGAAATCTACTGTGCTATGGCTCTGACTTGCACGCTAGAAAA
TCGCTGCATTTCACATCCATGTACAACGGAGGAAAACGTTATTTGGCTCA
TTTTTACGGATTTTTGTATTTTGCAGACCAAAAGGTTGACGCTTTCATGA
AACGCTTTGTCCGCGATCACATGCATTATCGAAATGACATATTTTGCCGC
GCTACAAAGGTGATCGATTTGTTGAGGAGGAATGCAAGTGATAAAAACGG
AGGGTACGATGCCATACATATCCGACGAGGGGACTTCCAATTTAAAGAGG
CGCGCCTCGACATAGAAGATATTTTTAAAGCAGTGGAGGATGTAATTGAT
CCTGGGTCACTAGTGTACATAGTAACGGATGAAAAGAACTCAACGCTTTT
CGACCCTGTACGTGATCTGTACCGTCTCCGGTTTTACGAAGACTTTTACA
AGGCGGCTGGATTGGAAGATATGGATCCCAACCTTACGGGTATGGTAGAG
CAAATAATCGCCTCAGGGGCGCGTACGTTCGTGGGCACCTACTTTTCCAC
GTTTACCGCCTTCATCACACGTATGAGGGGTTATCTTGGAAGGAATCCAG
GGTTCTATTATCTTGAAAAGTTCAAATATGCCTTGCAGTCCCCAGGCAAA
AATTTCTACGCGTCAGGAGCGAATTTCGTCCGAGAGTGGCCGGTTGCATA
CACTAATTTAGACTTAGCATGA back to topCoding sequence (CDS) from alignment at CM002455.1:512466..514187- >rna196 ID=rna196|Name=rna196|organism=Nannochloropsis gaditana|type=CDS|length=2466bp|location=Sequence derived from alignment at CM002455.1:512466..514187- (Nannochloropsis gaditana)
GGGGCGCGCTCCAGGAATTTGGCGATTTCTACGACATTTCTTCTTGGGAA
AAATACTTGGAGGTGATGCCAATGCATGAATACTTGAAGAAAGAAGGACT
GACTGGAGGCCTGAAGAATAAAGAGAGGCCGCCGGGGAATGCCACTACGT
TTGACCGCCAAAAAACGTTATGGGATTACATTCGACGGGCAACAGATGTA
TTTCCTGTTGGGCCCGATGCCCACGTCGTCGCTTTCGGACTCCCAGCGCA
TGTCAATACCTCAAAGGCTCTGCATGAATATCATCCCGAAGCAGATGCCA
TTATCGACGGACGAAATCTACTGTGCTATGGCTCTGACTTGCACGCTAGA
AAATCGCTGCATTTCACATCCATGTACAACGGAGGAAAACGTTATTTGGC
TCATTTTTACGGATTTTTGTATTTTGCAGACCAAAAGGTTGACGCTTTCA
TGAAACGCTTTGTCCGCGATCACATGCATTATCGAAATGACATATTTTGC
CGCGCTACAAAGGTGATCGATTTGTTGAGGAGGAATGCAAGTGATAAAAA
CGGAGGGTACGATGCCATACATATCCGACGAGGGGACTTCCAATTTAAAG
AGGCGCGCCTCGACATAGAAGATATTTTTAAAGCAGTGGAGGATGTAATT
GATCCTGGGTCACTAGTGTACATAGTAACGGATGAAAAGAACTCAACGCT
TTTCGACCCTGTACGTGATCTGTACCGTCTCCGGTTTTACGAAGACTTTT
ACAAGGCGGCTGGATTGGAAGATATGGATCCCAACCTTACGGGTATGGTA
GAGCAAATAATCGCCTCAGGGGCGCGTACGTTCGTGGGCACCTACTTTTC
CACGTTTACCGCCTTCATCACACGTATGAGGGGTTATCTTGGAAGGAATC
CAGGGTTCTATTATCTTGAAAAGTTCAAATATGCCTTGCAGTCCCCAGGC
AAAAATTTCTACGCGTCAGGAGCGAATTTCGTCCGAGAGTGGCCGGTTGC
ATACACTAATTTAGACTTAGCATGAATGGTGTTGCAAAATGCTCCCGATA
CTATCCTACATAGCTTAAAGGCAAGCCTTTCTGCTCAAATCAGCAACCAA
AGGTCATCTGAAGAGACACATTATGCTGGTTTTCAGGAAGCGACTTCAAA
TTTGGCAGCACCCGAAGCAGTAGCGACAGAACTTGTGAGCGAAACCTTGG
CAGTTAGATCATCGTTTGATGTCGCGAGAAAAGGGGGCGCGCTCCAGGAA
TTTGGCGATTTCTACGACATTTCTTCTTGGGAAAAATACTTGGAGGTGAT
GCCAATGCATGAATACTTGAAGAAAGAAGGACTGACTGGAGGCCTGAAGA
ATAAAGAGAGGCCGCCGGGGAATGCCACTACGTTTGACCGCCAAAAAACG
TTATGGGATTACATTCGACGGGCAACAGATGTATTTCCTGTTGGGCCCGA
TGCCCACGTCGTCGCTTTCGGACTCCCAGCGCATGTCAATACCTCAAAGG
CTCTGCATGAATATCATCCCGAAGCAGATGCCATTATCGACGGACGAAAT
CTACTGTGCTATGGCTCTGACTTGCACGCTAGAAAATCGCTGCATTTCAC
ATCCATGTACAACGGAGGAAAACGTTATTTGGCTCATTTTTACGGATTTT
TGTATTTTGCAGACCAAAAGGTTGACGCTTTCATGAAACGCTTTGTCCGC
GATCACATGCATTATCGAAATGACATATTTTGCCGCGCTACAAAGGTGAT
CGATTTGTTGAGGAGGAATGCAAGTGATAAAAACGGAGGGTACGATGCCA
TACATATCCGACGAGGGGACTTCCAATTTAAAGAGGCGCGCCTCGACATA
GAAGATATTTTTAAAGCAGTGGAGGATGTAATTGATCCTGGGTCACTAGT
GTACATAGTAACGGATGAAAAGAACTCAACGCTTTTCGACCCTGTACGTG
ATCTGTACCGTCTCCGGTTTTACGAAGACTTTTACAAGGCGGCTGGATTG
GAAGATATGGATCCCAACCTTACGGGTATGGTAGAGCAAATAATCGCCTC
AGGGGCGCGTACGTTCGTGGGCACCTACTTTTCCACGTTTACCGCCTTCA
TCACACGTATGAGGGGTTATCTTGGAAGGAATCCAGGGTTCTATTATCTT
GAAAAGTTCAAATATGCCTTGCAGTCCCCAGGCAAAAATTTCTACGCGTC
AGGAGCGAATTTCGTCCGAGAGTGGCCGGTTGCATACACTAATTTAGACT
TAGCATGAATGGTGTTGCAAAATGCTCCCGATACTATCCTACATAGCTTA
AAGGCAAGCCTTTCTGCTCAAATCAGCAACCAAAGGTCATCTGAAGAGAC
ACATTATGCTGGTTTTCAGGAAGCGACTTCAAATTTGGCAGCACCCGAAG
CAGTAGCGACAGAACTTGTGAGCGAAACCTTGGCAGTTAGATCATCGTTT
GATGTCGCGAGAAAAG back to top
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