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Properties
| Property Name | Value |
|---|
| Product | serine carboxypeptidase-like protein |
| Orig transcript id | gnl|cribi|Naga_100002g135.4858.mrna |
| Orig protein id | gnl|cribi|Naga_100002g135.4858 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:389952..393055 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1887 ID=rna1887|Name=rna1887|organism=Nannochloropsis gaditana|type=mRNA|length=2340bp
GTGGGTAGAATTACTTTGGTGACTTCTCCCGTAAGCGGAACAAGCTTTAT
TGTCTGCGTCAAGTTGTTACTGCGCATCACTCAACACGACTATCACTTAC
CGCTGCCCGTCCACTCATGCACGACTTCACACGAAACACATTTTAGAAAA
CAAAAAATAATGTCTATTAGCGCTCCGTCAGCAAAAGATCTACGAAATAA
CAGCCGCCGTGCCCGCAATGGCGGCTCGCGATCCGCTCTGGTAGCCGTGA
TGACAGGCATGCTAGGCTTTCTTGGAGCGGTGCTTGTTGTCATACACCAC
GGCCGGCCGAAGTTCGGGAACGTCCCAAGTCGTTTTCTTTCTAGCCGTAT
CATCACTGCGAGCAGCACCAGTTACCCTGGGATGGTTTCATTACCAAGTA
GGGGGAATAAATTGTCGGGAGCCTCCGGACCCATGTTCAAGTCTTTGCGC
GCCTCGTCCGTGCCGGCCGCTTACAAAGCTCAAAATGTTTCATCCTCATT
TAACGCATCCTATACCAAGGAAGCCCTTGCTGATGAAGTTCTTGACCTAC
CAGGCCTGACAGAAAAGGTCACTTTCAGGCAGTTCGCAGGCTATTTGAAC
TTAAAGGGGACCCAGAAGAACATCTTCTACTGGTACGTGGAGGCCGAGGA
GAGCCCTGACGAGGCTCCTCTTGTTTTCTGGACTAATGGTGGCCCAGGAT
GCAGTGGTCTATTTGGATTCATGACCGAAATGGGGCCGTTTCGACCGACC
CAGGACGGTAAGGCACTGCATCTCAACCCCTACAGTTGGAGCCGGGTCGC
CAACATGCTCTTTGTGGAACAACCCGTCACTGTCGGCTTCAGCTACACAA
ACAACCCCAAAGACCTCGCCTTTGGTGACAAACAAGCGGCCGAAGATAAT
TTTCAAGTCATACAAGCGTTTCTGCGGCGATTTCCCCATATGCGTGAGCG
AGAACTGCACCTGTCGGGAGAGAGCTACGCCGGACATTACCTCCCCCAGC
TTGCCCAGTACATCGTCGATCACCCGGAAAAAGACGCGCCCATTAATTTA
AAAGGGTTTATGGTCGGCAATCCTCTGACCGACCCTGTCGAGAACACAAT
CGGGGCGATCGATAGTTTCTGGGGCCACTCCTTGCTGCCCCGCGAGCTCT
ACAGTGAGTGGAGCAGCCGCTGCCGAAGCCAAAGCAACAATCCGGAGGTG
CTTTTCGGGGACAGGTGCATGCAACTGCAGAGCCAGATGTGGTTCTTCGT
CCAAGGCCTTAATCCGTACGCACTCGACTACCCGGTGTGCACGGACGCGA
CTTCCGGCTTCTCGAGTCCCGGGCAGCGAGGAGCCCCCTTCCCTCCCTCG
AAGGAGACTATTTTGGCGCAGGGCCGCAACCAGAGGTACCACCTTTTGAG
TCTGACGATGCCGGCCTTTATTGGCGGGCCGGCAGGTTTGGAAAGGGAAT
CGATGAGTCGCAACGGGGCCACCCCCCAGTATGAACCTTGCCAGGACGCG
TTTTCCACAGCCTACTTGAACCGCAAGGATGTACAGAAAGCGATCCACGC
CAAGGAGGGCACGCGGTGGGCGGATTGCTCGACCACAGTCAGCTATAATT
TCAACCGGAACGACCGGCTGGCTTTCGTCCAGGATACATACACCTACCTG
ACGAAGAGGGATTTGGGCCTTCGCATCCTCATTTTTTCGGGCGCAGACGA
TTCCGTCTGCGCGACGCAAGGGACCCTTTTCTGGGTACAAAATATGAAAT
GGCCTATAGAGAGTAACCAGGATTGGACGTCTTGGGGCGTGGATGGGCAG
GTTGCGGGCTTCCTGCAGGGCTATCAGAACGGAGTCACCATTGCCACTGT
CATGGGTGCTGGACACGAGGTCCCAGCCTACAAGCCTGTGGAGTCACTGG
CTCTGTTCGAGGCTTACCTCAAGGACAATATCTGGAAGAAGTAAAATCTG
GTAGGATTGGGTACAGGCGCAGATCGGCAGGTTGCCGTAAACTGATGCTA
TTGTATCATTTTCTTTACGATTGGGTGAAAGCATTCGTGTGTGCATGCTC
TGATTCGGTTATGTGTGAAAACATACCAGTCGTATCGCCCCCGCCAACAC
GTCACACGGGTGTGTGGCTGTCGATAGAAAAGGTAGACGAAACAATGCCA
GACATGGGCTGTACATGAGAGATGACACAACAAGTATAAACGGACATAGG
CAAGAAAAAAGACTTGAAAGCAGAGGACAAGGAAGTCTACGAAATGAAGA
CCTGTTTGGACTGCTTGTACGTTTGAGGAAAAAATTGACGTAAGCAATGA
CAGTGACGAAGAACGAAAGGAAAAGAAAGAGCAAAGCTGG back to topprotein sequence of rna1887 >rna1887-protein ID=rna1887-protein|Name=rna1887|organism=Nannochloropsis gaditana|type=polypeptide|length=623bp
MQTLSVPYSYEDYYQAGSCVHFKDELEEVSPLSTPSIEFTSVGRKRHAAV
FLIGAFVVAGILLVAARNLKSSSAYGKAHRMSGHDGSHFSSSMLSRTPFT
LLALNYTAAALADEIVALPGLPEPDSSFRQFAGYLDISPTKHIFYWYVEP
NRNSSVLDWAAVPLSLWTNGGPGCSGLFGYFAEHGPFRATQHGSGLEVNP
FSWNTLSHMLYVEIPVGVGFSYSEDETEYYIGDEQTARDNLLVLQTFFAR
FPHLRSSDLYLTSESYGGHYIPTLAREIIRNNRKRADSLAASETGAVGKT
RGQSTPQVVRLDRISPASDDQYINLRGLAIGNPFTDPVENVVGMIDALDG
HDVIPESLFERWLTTCRAQGAAAADVFYSRPCQDLQKEMWREVGQGVDPY
ALDWPLCADDRKSRGGKQRKALLQHLWRLHTSETFRADRGESSSSSLAST
AQAVLKQAPWGQDKEGLPFQPCEDDYLSAYLNRADVKRIIHAKERINWED
CTNCVRYEAHDQDVYMEPVYRYLMDENKDAGLRVLLYSGDDDSVCGPRGT
EMWLRTMGWKVTEPWRAWTVKEEVAGYMKTYENGLVFSTVLGAGHEVPAF
TPEAAWELFGAFLKGNISHLRAK back to topmRNA from alignment at CM002458.1:389952..393055+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1887 ID=rna1887|Name=rna1887|organism=Nannochloropsis gaditana|type=mRNA|length=3104bp|location=Sequence derived from alignment at CM002458.1:389952..393055+ (Nannochloropsis gaditana)
TCTGTCAGGCCTGGTAGGTCAAGAACTTCATCAGCAAGGGCTTCCTTGGT
ATAGGATGCGTTAAATGAGGATGAAACATTTTGAGCTTTGTAAGCGGCCG
GCACGGACGAGGCGCGCAAAGACTTGAACATGGGTCCGGAGGCTCCCGAC
AATTTATTCCCCCTACTTGGTAATGAAACCATCCCAGGGTAACTGGTGCT
GCTCGCAGTGATGATACGGCTAGAAAGAAAACGACTTGGGACGTTCCCGA
ACTTCGGCCGGCCGTGGTGTATGACAACAAGCACCGCTCCAAGAAAGCCT
AGCATGCCTGTCATCACGGCTACCAGAGCGGATCGCGAGCCGCCATTGCG
GGCACGGCGGCTGTTATTTCGTAGATCTTTTGCTGACGGAGCGCTAATAG
ACATTATTTTTTGTTTTCTAAAATGTGTTTCGTGTGAAGTCGTGCATGAG
TGGACGGGCAGCGGTAAGTGATAGTCGTGTTGAGTGATGCGCAGTAACAA
CTTGACGCAGACAATAAAGCTTGTTCCGCTTACGGGAGAAGTCACCAAAG
TAATTCTACCCACCGTTCTTTTCCAAAACCTGATATCTCCATTTAATCTG
CCCAGCATGAAAGCAAGGACACGAAATATAAAAATGGGAGACCCATTTAA
GAGGGGTATGTGAAACGGTTCAGGACTTCAACGGTTTGGATTTTTGAATT
TTGCAGGAGCCCGCCGACATGTTCTGGTCGGGTGCCGACCCTTCCACGTT
TGCCTTCTTATAATGTGTGGGAAATAAAAAATAATACTCATTCGCGACCG
TTGTGGtggtcctctgcctcccgcgcTTCAGTACAACAACACTCAATTCC
GTAGTCTTgtgcaggcggtggcggacAGTGAAGCAGCGGCAAGATAGCCA
CATCACCATCGAGGTGGCCGTCGCTCTCGCCGAGAACCCCAGTCAAAAGC
ATGCAGACACTTTCCGTCCCATATTCTTATGAAGACTACTACCAGGCAGG
TAGTTGTGTCCATTTCAAAGATGAACTTGAGGAAGTTAGTCCTTTATCGA
CGCCCTCTATAGAGGTGCGTTTCTTTGTGAGAGCAAGAAGGCCATAACTC
tagtgaggaaggaggacgggaggttTGCCAAATCATCCGATAATCACTCC
GTATGCACATATGTTCGTCTACTTTCCAAGTTCACCAGTGTTGGGAGAAA
GCGACATGCCGCGGTCTTCTTGATCGGCGCTTTCGTCGTAGCAGGCATAT
TGCTTGTCGCCGCGCGCAATTTGAAGAGTTCCTCGGCCTATGGCAAAGCG
CATCGAATGTCAGGCCACGATGGCtcgcatttttcttcttcaatgCTGTC
GAGGACGCCGTTTACTTTATTGGCTCTCAATTACACCGCTGCAGCGCTGG
CTGACGAGATAGTTGCCTTGCCGGGTCTCCCAGAACCGGATTCTTCATTT
CGACAGTTCGCAGGTTATTTGGATATCTCTCCCACAAAGCACATTTTCTA
CTGGTACGTTGAACCAAATAGAAATTCCAGCGTTCTAGATTGGGCTGCGG
TGCCGTTGTCATTGTGGACAAACGGGGGTCCCGGGTGCAGTGGTCTGTTT
GGATACTTCGCTGAGCATGGCCCGTTCCGAGCCACCCAACACGGAAGCGG
CCTGGAAGTTAACCCCTTCTCGTGGAACACACTGAGCCACATGCTGTATG
TCGAGATTCCAGTCGGGGTGGGGTTTAGCTACtcggaggacgagacggaA
TATTACATTGGGGACGAGCAGACCGCCCGCGACAATTTACTCGTCTTGCA
AACATTCTTCGCCCGCTTCCCGCACTTGCGAAGCTCGGATCTCTATCTCA
CGTCTGAGTCGTACGGCGGGCATTACATTCCTACGCTAGCGCGTGAGATT
ATTCGCAACAACCGTAAGCGCGCCGACTCGTTGGCAGCCAGCGAGACAGG
AGCCGTTGGGAAAACGCGGGGACAGAGCACTCCTCAAGTCGTCCGCCTGG
ATAGAATTAGTCCCGCGAGTGACGACCAGTACATCAATTTGCGAGGCCTT
GCCATCGGGAACCCTTTCACGGACCCGGTCGAAAACGTGGTGGGGATGAT
CGATGCCCTGGACGGCCACGACGTGATCCCCGAGTCCCTCTTTGAGCGCT
GGCTGACAACCTGTAGGGCCCAAGGGGCGGCTGCGGCCGATGTCTTCTAT
TCGCGCCCGTGCCAGGACCTGCAGAAGGAGATGTGGCGCGAGGTAGGGCA
GGGTGTCGACCCGTACGCGTTGGACTGGCCCCTGTGTGCGGATGACCGGa
aaagcagaggagggaaacagcGGAAAGCATTGCTGCAGCATCTTTGGCGC
TTACACACCTCAGAGACTTTTCGGGCAGACCGCGGCGAgtcatcgtcatc
gtctCTCGCTTCGACCGCACAGGCTGTTCTGAAACAGGCTCCTTGGGGCC
AGGACAAAGAGGGGCTACCCTTTCAGCCGTGTGAAGATGATTATCTGAGC
GCCTACTTGAACAGGGCAGACGTGAAGCGCATCATTCATGCCAAGGAGCG
GATCAACTGGGAGGACTGCACGAACTGCGTGCGCTACGAGGCCCACGACC
AGGATGTTTACATGGAGCCAGTATATCGTTACCTGATGGACGAGAATAAA
GACGCCGGACTTCGCGTGTTGCTTTACTCAGGTGACGATGATTCCGTGTG
TGGACCACGGGGCACAGAGATGTGGCTGAGGACGATGGGGTGGAAGGTAA
CAGAGCCGTGGCGGGCATGgacggtgaaggaggaagtagcTGGATACATG
AAGACTTATGAGAACGGATTGGTGTTCAGCACAGTGCTGGGCGCGGGCCA
CGAAGTACCCGCATTCACCCCGGAGGCTGCTTGGGAGCTCTTTGGGGCAT
TCTTGAAAGGCAACATCTCGCACTTGCGCGCCAAGTGAATGGGGGACCCG
TCAtgcaaagagggagagtaATGAAGGTTGGCTGCAAAGTGTTCGATGTA
TTTTTATCGAGGGGAATTTCTGTGCTTAATGATATCAGTGGATTTATACA
TCCATAGTAATTAACTCGGTCAAGAAATTATATATAACGTTGAGTTCCAA
AAAA back to topCoding sequence (CDS) from alignment at CM002458.1:389952..393055+ >rna1887 ID=rna1887|Name=rna1887|organism=Nannochloropsis gaditana|type=CDS|length=3744bp|location=Sequence derived from alignment at CM002458.1:389952..393055+ (Nannochloropsis gaditana)
ATGCAGACACTTTCCGTCCCATATTCTTATGAAGACTACTACCAGGCAGG
TAGTTGTGTCCATTTCAAAGATGAACTTGAGGAAGTTAGTCCTTTATCGA
CGCCCTCTATAGAGTTCACCAGTGTTGGGAGAAAGCGACATGCCGCGGTC
TTCTTGATCGGCGCTTTCGTCGTAGCAGGCATATTGCTTGTCGCCGCGCG
CAATTTGAAGAGTTCCTCGGCCTATGGCAAAGCGCATCGAATGTCAGGCC
ACGATGGCtcgcatttttcttcttcaatgCTGTCGAGGACGCCGTTTACT
TTATTGGCTCTCAATTACACCGCTGCAGCGCTGGCTGACGAGATAGTTGC
CTTGCCGGGTCTCCCAGAACCGGATTCTTCATTTCGACAGTTCGCAGGTT
ATTTGGATATCTCTCCCACAAAGCACATTTTCTACTGGTACGTTGAACCA
AATAGAAATTCCAGCGTTCTAGATTGGGCTGCGGTGCCGTTGTCATTGTG
GACAAACGGGGGTCCCGGGTGCAGTGGTCTGTTTGGATACTTCGCTGAGC
ATGGCCCGTTCCGAGCCACCCAACACGGAAGCGGCCTGGAAGTTAACCCC
TTCTCGTGGAACACACTGAGCCACATGCTGTATGTCGAGATTCCAGTCGG
GGTGGGGTTTAGCTACtcggaggacgagacggaATATTACATTGGGGACG
AGCAGACCGCCCGCGACAATTTACTCGTCTTGCAAACATTCTTCGCCCGC
TTCCCGCACTTGCGAAGCTCGGATCTCTATCTCACGTCTGAGTCGTACGG
CGGGCATTACATTCCTACGCTAGCGCGTGAGATTATTCGCAACAACCGTA
AGCGCGCCGACTCGTTGGCAGCCAGCGAGACAGGAGCCGTTGGGAAAACG
CGGGGACAGAGCACTCCTCAAGTCGTCCGCCTGGATAGAATTAGTCCCGC
GAGTGACGACCAGTACATCAATTTGCGAGGCCTTGCCATCGGGAACCCTT
TCACGGACCCGGTCGAAAACGTGGTGGGGATGATCGATGCCCTGGACGGC
CACGACGTGATCCCCGAGTCCCTCTTTGAGCGCTGGCTGACAACCTGTAG
GGCCCAAGGGGCGGCTGCGGCCGATGTCTTCTATTCGCGCCCGTGCCAGG
ACCTGCAGAAGGAGATGTGGCGCGAGGTAGGGCAGGGTGTCGACCCGTAC
GCGTTGGACTGGCCCCTGTGTGCGGATGACCGGaaaagcagaggagggaa
acagcGGAAAGCATTGCTGCAGCATCTTTGGCGCTTACACACCTCAGAGA
CTTTTCGGGCAGACCGCGGCGAgtcatcgtcatcgtctCTCGCTTCGACC
GCACAGGCTGTTCTGAAACAGGCTCCTTGGGGCCAGGACAAAGAGGGGCT
ACCCTTTCAGCCGTGTGAAGATGATTATCTGAGCGCCTACTTGAACAGGG
CAGACGTGAAGCGCATCATTCATGCCAAGGAGCGGATCAACTGGGAGGAC
TGCACGAACTGCGTGCGCTACGAGGCCCACGACCAGGATGTTTACATGGA
GCCAGTATATCGTTACCTGATGGACGAGAATAAAGACGCCGGACTTCGCG
TGTTGCTTTACTCAGGTGACGATGATTCCGTGTGTGGACCACGGGGCACA
GAGATGTGGCTGAGGACGATGGGGTGGAAGGTAACAGAGCCGTGGCGGGC
ATGgacggtgaaggaggaagtagcTGGATACATGAAGACTTATGAGAACG
GATTGGTGTTCAGCACAGTGCTGGGCGCGGGCCACGAAGTACCCGCATTC
ACCCCGGAGGCTGCTTGGGAGCTCTTTGGGGCATTCTTGAAAGGCAACAT
CTCGCACTTGCGCGCCAAGTGAATGCAGACACTTTCCGTCCCATATTCTT
ATGAAGACTACTACCAGGCAGGTAGTTGTGTCCATTTCAAAGATGAACTT
GAGGAAGTTAGTCCTTTATCGACGCCCTCTATAGAGTTCACCAGTGTTGG
GAGAAAGCGACATGCCGCGGTCTTCTTGATCGGCGCTTTCGTCGTAGCAG
GCATATTGCTTGTCGCCGCGCGCAATTTGAAGAGTTCCTCGGCCTATGGC
AAAGCGCATCGAATGTCAGGCCACGATGGCtcgcatttttcttcttcaat
gCTGTCGAGGACGCCGTTTACTTTATTGGCTCTCAATTACACCGCTGCAG
CGCTGGCTGACGAGATAGTTGCCTTGCCGGGTCTCCCAGAACCGGATTCT
TCATTTCGACAGTTCGCAGGTTATTTGGATATCTCTCCCACAAAGCACAT
TTTCTACTGGTACGTTGAACCAAATAGAAATTCCAGCGTTCTAGATTGGG
CTGCGGTGCCGTTGTCATTGTGGACAAACGGGGGTCCCGGGTGCAGTGGT
CTGTTTGGATACTTCGCTGAGCATGGCCCGTTCCGAGCCACCCAACACGG
AAGCGGCCTGGAAGTTAACCCCTTCTCGTGGAACACACTGAGCCACATGC
TGTATGTCGAGATTCCAGTCGGGGTGGGGTTTAGCTACtcggaggacgag
acggaATATTACATTGGGGACGAGCAGACCGCCCGCGACAATTTACTCGT
CTTGCAAACATTCTTCGCCCGCTTCCCGCACTTGCGAAGCTCGGATCTCT
ATCTCACGTCTGAGTCGTACGGCGGGCATTACATTCCTACGCTAGCGCGT
GAGATTATTCGCAACAACCGTAAGCGCGCCGACTCGTTGGCAGCCAGCGA
GACAGGAGCCGTTGGGAAAACGCGGGGACAGAGCACTCCTCAAGTCGTCC
GCCTGGATAGAATTAGTCCCGCGAGTGACGACCAGTACATCAATTTGCGA
GGCCTTGCCATCGGGAACCCTTTCACGGACCCGGTCGAAAACGTGGTGGG
GATGATCGATGCCCTGGACGGCCACGACGTGATCCCCGAGTCCCTCTTTG
AGCGCTGGCTGACAACCTGTAGGGCCCAAGGGGCGGCTGCGGCCGATGTC
TTCTATTCGCGCCCGTGCCAGGACCTGCAGAAGGAGATGTGGCGCGAGGT
AGGGCAGGGTGTCGACCCGTACGCGTTGGACTGGCCCCTGTGTGCGGATG
ACCGGaaaagcagaggagggaaacagcGGAAAGCATTGCTGCAGCATCTT
TGGCGCTTACACACCTCAGAGACTTTTCGGGCAGACCGCGGCGAgtcatc
gtcatcgtctCTCGCTTCGACCGCACAGGCTGTTCTGAAACAGGCTCCTT
GGGGCCAGGACAAAGAGGGGCTACCCTTTCAGCCGTGTGAAGATGATTAT
CTGAGCGCCTACTTGAACAGGGCAGACGTGAAGCGCATCATTCATGCCAA
GGAGCGGATCAACTGGGAGGACTGCACGAACTGCGTGCGCTACGAGGCCC
ACGACCAGGATGTTTACATGGAGCCAGTATATCGTTACCTGATGGACGAG
AATAAAGACGCCGGACTTCGCGTGTTGCTTTACTCAGGTGACGATGATTC
CGTGTGTGGACCACGGGGCACAGAGATGTGGCTGAGGACGATGGGGTGGA
AGGTAACAGAGCCGTGGCGGGCATGgacggtgaaggaggaagtagcTGGA
TACATGAAGACTTATGAGAACGGATTGGTGTTCAGCACAGTGCTGGGCGC
GGGCCACGAAGTACCCGCATTCACCCCGGAGGCTGCTTGGGAGCTCTTTG
GGGCATTCTTGAAAGGCAACATCTCGCACTTGCGCGCCAAGTGA back to top
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