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Properties
| Property Name | Value |
|---|
| Product | Peptidase S10, serine carboxypeptidase |
| Orig transcript id | gnl|cribi|Naga_100002g136.4796.mrna |
| Orig protein id | gnl|cribi|Naga_100002g136.4796 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:388087..390514 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1886 ID=rna1886|Name=rna1886|organism=Nannochloropsis gaditana|type=mRNA|length=1246bp
AAATGCGGGGAGATGATGTGAAAAGATACAAGGTCCCATGCCTACCACTA
CCAACTGCTTTGTCAGGTTCGAGCAGTGGAACTCACCACTCCCATGACTT
GCAGAGTATCTACTTAGGAAGCATGCGGACGCATGAATACAGCAAGAGGA
CAAGTTGATGAAACTCTCCCATTCCTCTCCCTTCCGCTCTACTGGCCTCG
ATATCCCTAGGACGGGCTCCTCCCAGTCCCTTACACTCAAAGCTTGGGGG
CAGCGCTCGATGCTCGAGGTTGGGCGCTGGTGCAGGTCCTGCTTTCCTCA
TCCTACACGGGCTTTGGCCACACCTCCCTCAAGACCGATGCGGTCGAGCT
AGGGCGTCTTGTCACCTTTCTTCAGGAGGAGATGGGTTCACTGGCTGTGG
GTCTAGTGGGCCACTCAACCGGGACTCAGGACAGCGTGTACTACGTCAAG
ACGTGCGAGGATCCTTCCAAGAAGCCGGCCTTCATCGTGCTCCAGGCCCC
TGTAAGCGACCGGGAGCACCTTTGTCTGCAGGAAACCACGTCCAAATTTG
TTCAATTAGCGCGCGAGATGCGCGCGCAAGGGAAAGGAGAAGAGATGTTG
CCCCGCGCTGCGATGTGGGCACCTATCACAGCCGATCGATTTCTGGACTT
GGCGACGAAAGAGGGGCTCGACGATTTTTTTTCGAGCGACCTGAGTGACG
GCGAGCTCCGTGACCGGCTAGGCCACCTTGACATACCCACTCTGTTCCTC
CTGTCAGGCGCCGATGAATACGTGCCCTTGGGAGTCAACGTGCAGACGTT
GGGGGAGAGATTTGTGAAGGCCTGCGCGGGGGCCTGTCCGCTACCGCGGG
CGGCCACGGTGGTGGGCGCCAGGCACTCGGGACGGGGCCATGAGGAAGTG
ATTACCTTGACGATTTTAGCTTTCCTGGACGAGGTGGACAACCTTATTTG
TTGAACTGCGCGACCTGTTTCACTTGTCTGTCACAAATAGATGCAAATGT
CTCCAACTTGACGTGGGCGACCTACAAGGGAAGGAAGAGGAGGGTGTAAC
GGCACGCCAGAACGAGGAGACCCCGGGAGACCTTTTCGGTATGTCATTGA
AAAAGGCCAGGGGAAGAAAAATTAAATATAACAGCAATTGAAGTCGACCT
TTTGCGGCTAGAAATGTGAAAATCATACAGATCTCAGAAGTCTGTGCAAA
TCACGTGTAGCACTTGATTACCCGATCACAAATAATACTTTAATGC back to topprotein sequence of rna1886 >rna1886-protein ID=rna1886-protein|Name=rna1886|organism=Nannochloropsis gaditana|type=polypeptide|length=594bp
MSISAPSAKDLRNNSRRARNGGSRSALVAVMTGMLGFLGAVLVVIHHGRP
KFGNVPSRFLSSRIITASSTSYPGMVSLPSRGNKLSGASGPMFKSLRASS
VPAAYKAQNVSSSFNASYTKEALADEVLDLPGLTEKVTFRQFAGYLNLKG
TQKNIFYWYVEAEESPDEAPLVFWTNGGPGCSGLFGFMTEMGPFRPTQDG
KALHLNPYSWSRVANMLFVEQPVTVGFSYTNNPKDLAFGDKQAAEDNFQV
IQAFLRRFPHMRERELHLSGESYAGHYLPQLAQYIVDHPEKDAPINLKGF
MVGNPLTDPVENTIGAIDSFWGHSLLPRELYSEWSSRCRSQSNNPEVLFG
DRCMQLQSQMWFFVQGLNPYALDYPVCTDATSGFSSPGQRGAPFPPSKET
ILAQGRNQRYHLLSLTMPAFIGGPAGLERESMSRNGATPQYEPCQDAFST
AYLNRKDVQKAIHAKEGTRWADCSTTVSYNFNRNDRLAFVQDTYTYLTKR
DLGLRILIFSGADDSVCATQGTLFWVQNMKWPIESNQDWTSWGVDGQVAG
FLQGYQNGVTIATVMGAGHEVPAYKPVESLALFEAYLKDNIWKK back to topmRNA from alignment at CM002458.1:388087..390514- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1886 ID=rna1886|Name=rna1886|organism=Nannochloropsis gaditana|type=mRNA|length=2428bp|location=Sequence derived from alignment at CM002458.1:388087..390514- (Nannochloropsis gaditana)
GTGGGTAGAATTACTTTGGTGACTTCTCCCGTAAGCGGAACAAGCTTTAT
TGTCTGCGTCAAGTTGTTACTGCGCATCACTCAACACGACTATCACTTAC
CGCTGCCCGTCCACTCATGCACGACTTCACACGAAACACATTTTAGAAAA
CAAAAAATAATGTCTATTAGCGCTCCGTCAGCAAAAGATCTACGAAATAA
CAGCCGCCGTGCCCGCAATGGCGGCTCGCGATCCGCTCTGGTAGCCGTGA
TGACAGGCATGCTAGGCTTTCTTGGAGCGGTGCTTGTTGTCATACACCAC
GGCCGGCCGAAGTTCGGGAACGTCCCAAGTCGTTTTCTTTCTAGCCGTAT
CATCACTGCGAGCAGCACCAGTTACCCTGGGATGGTTTCATTACCAAGTA
GGGGGAATAAATTGTCGGGAGCCTCCGGACCCATGTTCAAGTCTTTGCGC
GCCTCGTCCGTGCCGGCCGCTTACAAAGCTCAAAATGTTTCATCCTCATT
TAACGCATCCTATACCAAGGAAGCCCTTGCTGATGAAGTTCTTGACCTAC
CAGGCCTGACAGAAAAGGTCACTTTCAGGCAGTTCGCAGGCTATTTGAAC
TTAAAGGGGACCCAGAAGAACATCTTCTACTGGTACGTGGAGGCCGAGGA
GAGCCCTGACGAGGCTCCTCTTGTTTTCTGGACTAATGGTGGCCCAGGAT
GCAGTGGTCTATTTGGATTCATGACCGAAATGGGGCCGTTTCGACCGACC
CAGGACGGTAAGGCACTGCATCTCAACCCCTACAGTTGGAGCCGGGTCGC
CAACATGCTCTTTGTGGAACAACCCGTCACTGTCGGCTTCAGCTACACAA
ACAACCCCAAAGACCTCGCCTTTGGTGACAAACAAGCGGCCGAAGATAAT
TTTCAAGTCATACAAGCGTTTCTGCGGCGATTTCCCCATATGCGTGAGCG
AGAACTGCACCTGTCGGGAGAGAGCTACGCCGGACATTACCTCCCCCAGC
TTGCCCAGTACATCGTCGATCACCCGGAAAAAGACGCGCCCATTAATTTA
AAAGGGTTTATGGTCGGCAATCCTCTGACCGACCCTGTCGAGAACACAAT
CGGGGCGATCGATAGTTTCTGGGGCCACTCCTTGCTGCCCCGCGAGCTCT
ACAGTGAGTGGAGCAGCCGCTGCCGAAGCCAAAGCAACAATCCGGAGGTG
CTTTTCGGGGACAGGTGCATGCAACTGCAGAGCCAGATGTGGTTCTTCGT
CCAAGGCCTTAATCCGTACGCACTCGACTACCCGGTGTGCACGGACGCGA
CTTCCGGCTTCTCGAGTCCCGGGCAGCGAGGAGCCCCCTTCCCTCCCTCG
AAGGAGACTATTTTGGCGCAGGGCCGCAACCAGAGGTACCACCTTTTGAG
TCTGACGATGCCGGCCTTTATTGGCGGGCCGGCAGGTTTGGAAAGGGAAT
CGATGAGTCGCAACGGGGCCACCCCCCAGTATGAACCTTGCCAGGACGCG
TTTTCCACAGCCTACTTGAACCGCAAGGATGTACAGAAAGCGATCCACGC
CAAGGAGGGCACGCGGTGGGCGGATTGCTCGACCACAGTCAGCTATAATT
TCAACCGGAACGACCGGCTGGCTTTCGTCCAGGATACATACACCTACCTG
ACGAAGAGGGATTTGGGCCTTCGCATCCTCATTTTTTCGGGCGCAGACGA
TTCCGTCTGCGCGACGCAAGGGACCCTTTTCTGGGTACAAAATATGAAAT
GGCCTATAGAGAGTAACCAGGATTGGACGTCTTGGGGCGTGGATGGGCAG
GTTGCGGGCTTCCTGCAGGGCTATCAGAACGGAGTCACCATTGCCACTGT
CATGGGTGCTGGACACGAGGTACGAAGCACGCTGTGTCTGTATTCGTTTG
TGTGTGATAGCGCACGCCTCATGCATCCTCCTCATTGTTTTTGGTTTCCT
TAAACAGGTCCCAGCCTACAAGCCTGTGGAGTCACTGGCTCTGTTCGAGG
CTTACCTCAAGGACAATATCTGGAAGAAGTAAAATCTGGTAGGATTGGGT
ACAGGCGCAGATCGGCAGGTTGCCGTAAACTGATGCTATTGTATCATTTT
CTTTACGATTGGGTGAAAGCATTCGTGTGTGCATGCTCTGATTCGGTTAT
GTGTGAAAACATACCAGTCGTATCGCCCCCGCCAACACGTCACACGGGTG
TGTGGCTGTCGATAGAAAAGGTAGACGAAACAATGCCAGACATGGGCTGT
ACATGAGAGATGACACAACAAGTATAAACGGACATAGGCAAGAAAAAAGA
CTTGAAAGCAGAGGACAAGGAAGTCTACGAAATGAAGACCTGTTTGGACT
GCTTGTACGTTTGAGGAAAAAATTGACGTAAGCAATGACAGTGACGAAGA
ACGAAAGGAAAAGAAAGAGCAAAGCTGG back to topCoding sequence (CDS) from alignment at CM002458.1:388087..390514- >rna1886 ID=rna1886|Name=rna1886|organism=Nannochloropsis gaditana|type=CDS|length=3570bp|location=Sequence derived from alignment at CM002458.1:388087..390514- (Nannochloropsis gaditana)
GTCCCAGCCTACAAGCCTGTGGAGTCACTGGCTCTGTTCGAGGCTTACCT
CAAGGACAATATCTGGAAGAAGTAAATGTCTATTAGCGCTCCGTCAGCAA
AAGATCTACGAAATAACAGCCGCCGTGCCCGCAATGGCGGCTCGCGATCC
GCTCTGGTAGCCGTGATGACAGGCATGCTAGGCTTTCTTGGAGCGGTGCT
TGTTGTCATACACCACGGCCGGCCGAAGTTCGGGAACGTCCCAAGTCGTT
TTCTTTCTAGCCGTATCATCACTGCGAGCAGCACCAGTTACCCTGGGATG
GTTTCATTACCAAGTAGGGGGAATAAATTGTCGGGAGCCTCCGGACCCAT
GTTCAAGTCTTTGCGCGCCTCGTCCGTGCCGGCCGCTTACAAAGCTCAAA
ATGTTTCATCCTCATTTAACGCATCCTATACCAAGGAAGCCCTTGCTGAT
GAAGTTCTTGACCTACCAGGCCTGACAGAAAAGGTCACTTTCAGGCAGTT
CGCAGGCTATTTGAACTTAAAGGGGACCCAGAAGAACATCTTCTACTGGT
ACGTGGAGGCCGAGGAGAGCCCTGACGAGGCTCCTCTTGTTTTCTGGACT
AATGGTGGCCCAGGATGCAGTGGTCTATTTGGATTCATGACCGAAATGGG
GCCGTTTCGACCGACCCAGGACGGTAAGGCACTGCATCTCAACCCCTACA
GTTGGAGCCGGGTCGCCAACATGCTCTTTGTGGAACAACCCGTCACTGTC
GGCTTCAGCTACACAAACAACCCCAAAGACCTCGCCTTTGGTGACAAACA
AGCGGCCGAAGATAATTTTCAAGTCATACAAGCGTTTCTGCGGCGATTTC
CCCATATGCGTGAGCGAGAACTGCACCTGTCGGGAGAGAGCTACGCCGGA
CATTACCTCCCCCAGCTTGCCCAGTACATCGTCGATCACCCGGAAAAAGA
CGCGCCCATTAATTTAAAAGGGTTTATGGTCGGCAATCCTCTGACCGACC
CTGTCGAGAACACAATCGGGGCGATCGATAGTTTCTGGGGCCACTCCTTG
CTGCCCCGCGAGCTCTACAGTGAGTGGAGCAGCCGCTGCCGAAGCCAAAG
CAACAATCCGGAGGTGCTTTTCGGGGACAGGTGCATGCAACTGCAGAGCC
AGATGTGGTTCTTCGTCCAAGGCCTTAATCCGTACGCACTCGACTACCCG
GTGTGCACGGACGCGACTTCCGGCTTCTCGAGTCCCGGGCAGCGAGGAGC
CCCCTTCCCTCCCTCGAAGGAGACTATTTTGGCGCAGGGCCGCAACCAGA
GGTACCACCTTTTGAGTCTGACGATGCCGGCCTTTATTGGCGGGCCGGCA
GGTTTGGAAAGGGAATCGATGAGTCGCAACGGGGCCACCCCCCAGTATGA
ACCTTGCCAGGACGCGTTTTCCACAGCCTACTTGAACCGCAAGGATGTAC
AGAAAGCGATCCACGCCAAGGAGGGCACGCGGTGGGCGGATTGCTCGACC
ACAGTCAGCTATAATTTCAACCGGAACGACCGGCTGGCTTTCGTCCAGGA
TACATACACCTACCTGACGAAGAGGGATTTGGGCCTTCGCATCCTCATTT
TTTCGGGCGCAGACGATTCCGTCTGCGCGACGCAAGGGACCCTTTTCTGG
GTACAAAATATGAAATGGCCTATAGAGAGTAACCAGGATTGGACGTCTTG
GGGCGTGGATGGGCAGGTTGCGGGCTTCCTGCAGGGCTATCAGAACGGAG
TCACCATTGCCACTGTCATGGGTGCTGGACACGAGGTCCCAGCCTACAAG
CCTGTGGAGTCACTGGCTCTGTTCGAGGCTTACCTCAAGGACAATATCTG
GAAGAAGTAAATGTCTATTAGCGCTCCGTCAGCAAAAGATCTACGAAATA
ACAGCCGCCGTGCCCGCAATGGCGGCTCGCGATCCGCTCTGGTAGCCGTG
ATGACAGGCATGCTAGGCTTTCTTGGAGCGGTGCTTGTTGTCATACACCA
CGGCCGGCCGAAGTTCGGGAACGTCCCAAGTCGTTTTCTTTCTAGCCGTA
TCATCACTGCGAGCAGCACCAGTTACCCTGGGATGGTTTCATTACCAAGT
AGGGGGAATAAATTGTCGGGAGCCTCCGGACCCATGTTCAAGTCTTTGCG
CGCCTCGTCCGTGCCGGCCGCTTACAAAGCTCAAAATGTTTCATCCTCAT
TTAACGCATCCTATACCAAGGAAGCCCTTGCTGATGAAGTTCTTGACCTA
CCAGGCCTGACAGAAAAGGTCACTTTCAGGCAGTTCGCAGGCTATTTGAA
CTTAAAGGGGACCCAGAAGAACATCTTCTACTGGTACGTGGAGGCCGAGG
AGAGCCCTGACGAGGCTCCTCTTGTTTTCTGGACTAATGGTGGCCCAGGA
TGCAGTGGTCTATTTGGATTCATGACCGAAATGGGGCCGTTTCGACCGAC
CCAGGACGGTAAGGCACTGCATCTCAACCCCTACAGTTGGAGCCGGGTCG
CCAACATGCTCTTTGTGGAACAACCCGTCACTGTCGGCTTCAGCTACACA
AACAACCCCAAAGACCTCGCCTTTGGTGACAAACAAGCGGCCGAAGATAA
TTTTCAAGTCATACAAGCGTTTCTGCGGCGATTTCCCCATATGCGTGAGC
GAGAACTGCACCTGTCGGGAGAGAGCTACGCCGGACATTACCTCCCCCAG
CTTGCCCAGTACATCGTCGATCACCCGGAAAAAGACGCGCCCATTAATTT
AAAAGGGTTTATGGTCGGCAATCCTCTGACCGACCCTGTCGAGAACACAA
TCGGGGCGATCGATAGTTTCTGGGGCCACTCCTTGCTGCCCCGCGAGCTC
TACAGTGAGTGGAGCAGCCGCTGCCGAAGCCAAAGCAACAATCCGGAGGT
GCTTTTCGGGGACAGGTGCATGCAACTGCAGAGCCAGATGTGGTTCTTCG
TCCAAGGCCTTAATCCGTACGCACTCGACTACCCGGTGTGCACGGACGCG
ACTTCCGGCTTCTCGAGTCCCGGGCAGCGAGGAGCCCCCTTCCCTCCCTC
GAAGGAGACTATTTTGGCGCAGGGCCGCAACCAGAGGTACCACCTTTTGA
GTCTGACGATGCCGGCCTTTATTGGCGGGCCGGCAGGTTTGGAAAGGGAA
TCGATGAGTCGCAACGGGGCCACCCCCCAGTATGAACCTTGCCAGGACGC
GTTTTCCACAGCCTACTTGAACCGCAAGGATGTACAGAAAGCGATCCACG
CCAAGGAGGGCACGCGGTGGGCGGATTGCTCGACCACAGTCAGCTATAAT
TTCAACCGGAACGACCGGCTGGCTTTCGTCCAGGATACATACACCTACCT
GACGAAGAGGGATTTGGGCCTTCGCATCCTCATTTTTTCGGGCGCAGACG
ATTCCGTCTGCGCGACGCAAGGGACCCTTTTCTGGGTACAAAATATGAAA
TGGCCTATAGAGAGTAACCAGGATTGGACGTCTTGGGGCGTGGATGGGCA
GGTTGCGGGCTTCCTGCAGGGCTATCAGAACGGAGTCACCATTGCCACTG
TCATGGGTGCTGGACACGAG back to top
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