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Properties
| Property Name | Value |
|---|
| Product | 2 peptidase |
| Orig transcript id | gnl|cribi|Naga_100002g142.4833.mrna |
| Orig protein id | gnl|cribi|Naga_100002g142.4833 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:362313..365802 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1881 ID=rna1881|Name=rna1881|organism=Nannochloropsis gaditana|type=mRNA|length=2355bp
CCTCATGATGCACTAACAATTGAAACGTTCTTTCCATGCTCCTCACTTTC
CGCAGGGTGGGCTGATCAAATCAATCACGCAAATTGCGCTGCCTACGCGC
GCACGCCCCAGTCAAGGGCCTCAAGGAAGTGGGGCCCGGAATGCCTGACC
TGCAGAACCGTCGCCTGTATCGGCTCCGGGCGCTGTCTTGGTCGTGCGCT
CTCCTCCTGTTGGAAAAGGGTACATGTGCACATGGAGATGCAACGAGCGT
GCGGCGGCTGGGAGGGACTCGCCCATGGTGGACATCGAGGACCGCAGCCT
CGGTTGCGGCTGAAGCTGCCGCCGCCGCCTTGCCCTTTCTAGCCGCTCCA
GCCAAAATGTCATTTTTGCAGCCCACAGTGGCCAGCACTGAATCCGCGAG
AGCAGCAAAGACGGTGCCAGTTCCTCCATTCCGCCTGCCCCAGAAGACGT
GGATGCCGTGGCCTCAGCCCTTCTCTGACATGCAGACCCCTGCCAAGGAC
CCAAGGCCGGGACAAGCGCTGGAGATATACTCAGAGCCACGAAATGATAC
AGGCCAGGCACCCTTCCAATTCCCCACTCATGCGTCCAGAGGCAAAGAGG
GGAGAGAGGCCTCCGACAACGCGGGGGACGAAACCGCGGACGGCGCCCTT
GCCCTGTCCCTCCTAGGGTTGGGCCTGTGGATTGCCTTGAGTGCCCTGCT
CGTCATCCGCTTCGTCCAAAGCGAGAAGCGCCGGGAGATCATGCTCCGAT
TCTGGCGCGCGATCGACGCGAATCCTGAGCTGCGACGGGCCGTGGAGGAG
GAGGCAGGAGGGGCTCCTCTCCCCCAGTACCCGCGCCGTCCAGGGCTCCA
CCGCTTCTTTCGGGCCTGCTGCGTGGCCTTGCTTGTGACGGTCGGCTTGC
ACATCGTCTTTTTTCGTGGGCCGCACCCCTGTACCGGCTGGTGAGGGGGA
GGGCGGGAGCGAGGGGGGCGGGGGGAAAGGGGGGGGGGAAGCGGGGGAGG
AAGCGGCTTGCCCCTGGACCCGACCAGTGACGACGGAACAGCAGGGAACA
ACCCCGTCGTAGGCATCGTCGTCCTCTCTCTCCTGCTTGCGTCCGTGATT
TTGATCATCCGGGGCCTATACATGGCTTGCTGTGCCTCCTCGTCCTCTTT
CCCCGCTTCCTCGGCTCCTTACGGCCCAGAAGGGGGGCCGGCCCGGTGGG
ACACGGAGGCGGGGGCAGGTGTCCATCCAGTCGCCGTGACGCCCTACGTG
TCCTTGCATAGCACCGGGTGCAACAGCGGGGGATGGGTTTGGGGGGGTAG
TCCATTCCTGGGGGAGGCCCAGGAAGTGTACTACGTGGGTGTCGCAGTGC
CGGAGTCCACTTCCCCTCGGTCGGGACAGGACCCGGGCAGGTCGGGTCCG
ACGGCGGAGGAGGCAGGTGGGGAGGAAGGTGCGCCCCCCCCTTACTCCTC
GGCCTTGCAAACGATGCCGGAGAGCTCGACTTCGGTAGTGTAAAGCCTCC
TTCATGATGTGTGTTGTCTAGGTGTGGGCGGTGGCGTGTAGGGTAGAACA
AGCGGAGTATATTCTCGTTTAAAGTGGGAAGCTTTCTTTCCTTTGAAACC
TTGGTGGTTTCTGGGGGGGAAGCAAGCAGAAGGCGAGATAAATGCAGCCG
GGCGTGGGAGTGCGATTGGATAGATGTGAGATAGAGGGTGGAAGCACTGG
AAACGTGAAAATGTTACCAGATAGTTTATCGGCGCATGTATGAAAAAGAA
TGGTCGGAAGACTTGTCGAGAAGGTCCAGGAAAGGGATGAGAGACACGAT
TGAAATTCTTGGAAACTACAAGTGCCGCGATAAGAGTGAGGCTGTGGAAA
GGCGTGAAAAACGAGTGGTAGAAGAAAGGGGAAAGCAATAGCCAAGAAGG
TTTCTGATTCTTCATTGGATTGGTAGAAAGAAAGATAGGCGCGGCGAGTA
CTGCTCGGTGACTCTAGACTGCAGACATGCGAAGTGTAAGAATAGGGCGA
GTGGGGGCTTTGGCAAATTTTGAGGGGGAGAAAAAGCCAAGCCAGGATCA
AGAAAGGAAGGAGAGCTGGAGCAAAAAAGGTGCTTTGGGGGCAACAGGAG
GACTAGAGAGCCGCCTTGTCCATTTTGTGTGCATAATATCGACGGAGACT
CCTCTAATGGCAGATGGGAAACGAGAGGCGTGAGGTTTACGCTCTGGAAA
GACGGGAAGAAAATACACACCGTGAAGACCAAAGAAATTGAGGAGTGAGA
CTGAAAAGGGTTTTGCTGTGCAAGCAGTCGTCAGCGTCTCTTAACTCTCA
TTTTATCTCGCCCTTTTCAAGATTAGCGTGGTCAGAAGATGGATGCATTA
TTACT back to topprotein sequence of rna1881 >rna1881-protein ID=rna1881-protein|Name=rna1881|organism=Nannochloropsis gaditana|type=polypeptide|length=1028bp
MRKSPWRLSMALVLVFLLILCGCEKLVTAEVSAGGHSRLEIRLQVTSRDR
YAIQGVGGFVHAPGMSDGRRLRRMPLSTSRHSPGPPLPSTMAIAHARARS
LSAGLWRFDREFQPSPAEEEDGFDPPGKGLLRLVWNVLRRRSVQVVGVAV
LALSFFRNGLERKGSGKAGGILHGNGVPNAPERYVRSKDPAVTKSQQKSE
REKKRLEKEPKQETERAEQPGLRRGKESSTPFPLAGKPVPLLDSEAPVPA
PEGVQEEGSGAVGAPSSEKDAGEEPLGPGPDTEKRFGAGKEQGLARKEAR
GGPLGLFRGWGRSKTEGEQAGGGRREGEGETGHGKETDEGRVGKEEEGKA
QSGEGGAEKGTGGGIDGKGGEEVVESGERRVEGREGREEEGEERKEEEEE
EEEEEEGEGTVPFEERETPLLEDGEAFLARRGDVLQGAPVGTEGREVRAQ
RRGRPRRAEPGPAVVPVPGAPPSSSSSTFPPPPASSARPSGSSSFVGGVF
RAVAPAVPRVDCVKVYKGEIKFASGSGVIYSPEGYLMTNSLLVRNALELK
VTLADGREYPAEIKGVDEVLDVAVLKIIPPIPPAPASSPPSLPTFQYAPI
GDSESLQVGDWVLSVGSPRSPGPSVILGIVSGLTKTAAEVGRPETQVSFI
QTDASFDAGVVGGPLVNEYGEVVGINSIGLRTSSTVQFSVPINQLKAAVE
ALARGREVHHPSIGVEMMPITPTLAAQLNQQAMLRQGQLQVQEEERMAEG
KRQRQDARKEKGQRRSGGRRQVGDGKDGDTGGALAHFLRKAQHAGDFLRQ
WQQPSDRSTPLPPPSSSPSSVGPSSSSSPASQIQFIPEGGAVVVVHVLED
SPAQHAGLRHLDILLEIDRCPIYGVGDAQRVIHSSGVGRNLEIKVLRNTQ
EVTLHVRTTDFLTLFKKQQAAKKYPELRPKVKEGRRVGEEGGWLDGENAR
HEQVGGVPGEQEGEQQPASDERGEEGLAVGECEEVNEKGAQVGRKASPRA
AARGEDKRGDGRSAKETEREDLQGECWT back to topmRNA from alignment at CM002458.1:362313..365802+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1881 ID=rna1881|Name=rna1881|organism=Nannochloropsis gaditana|type=mRNA|length=3490bp|location=Sequence derived from alignment at CM002458.1:362313..365802+ (Nannochloropsis gaditana)
CATCCCCACCGACCAGATTGATAAACACAAGCACCACATCGGCTGCTTAC
ATTCTGCCTTGCTGAGACTTGATCGTGGAGTCAGGAGCACGCCGCTGTTC
CTGTTACTTTAACTTTTTCAAAGTCGTAATTAACAGCCTAACGTTTTCCT
TCACCTACTTGTCACCACAAGCAAGCTATGTTAGAGCGACGTCGTCCTTT
TTGACATTTAAACAACCGGGTTAGCGACGAGCATACAAACGTTCCTTCAA
CATCGGATTATCACGATGCGGAAAAGCCCTTGGCGTCTCTCCATGGCCTT
GGTCCTCGTCTTTCTACTTATCCTTTGCGGGTGCGAAAAGCTAGTGACGG
CTGAAGTTTCAGCAGGGGGCCATTCCAGGCTGGAAATAAGGCTGCAGGTA
ACAAGTCGCGATAGATATGCGATtcagggagtgggaggattCGTGCACGC
ACCGGGGATGTCGGACGGACGCCGCCTACGTCGGATGCCCTTGTCCACGT
CGAGACACTCGCCTggcccgcctcttccctcaaCGATGGCTATCGCGCAC
GCCCGAGCCCGCTCTCTGTCTGCGGGTCTTTGGCGCTTTGACAGGGAGTT
TCAGCCGTCGCctgccgaagaggaggatggcttTGACCCCCCAGGGAAAG
GCTTGCTTCGTCTCGTCTGGAACGTGTTGCGACGCCGCTCCGTGCAAGTC
GTTGGCGTGGCGGTGCTTGCGCTCAGCTTTTTCAGAAACGGGTTGGAGCG
GAAAGGCTCTGGTAAAGCCGGTGGCATCCTGCATGGCAACGGGGTTCCCA
ACGCACCCGAACGATACGTCCGCAGCAAGGATCCCGCAGTGACCAAGAGC
CAGCAAAAAAGcgagcgggagaagaaacGTCTGGAAAAAGAACCAAAGCA
AGAGACGGAGCGGGCGGAGCAGCCGGGACTGCGACGCGGGAAGGAGTCGT
CTACACCCTTTCCTTTGGCGGGAAAGCCCGTGCCTCTGCTGGACTCGGAG
GCTCCCGTCCCGGCGCCCGAGGGGgttcaggaggagggtagcGGCGCCGT
GGGTGCGCCCAGCAGTgagaaggacgcgggggaggagccgtTGGGGCCTG
GGCCGGATACAGAGAAGAGATTTGGCGCAGGAAAGGAGCAAGGGttggcc
aggaaggaggcgcgAGGGGGGCCTCTGGGGCTCTTtcgggggtgggggcg
gagtaagacagaaggagagcaggcgggcggcggccgcagggagggggagg
gggaaacgggccatgggaaggagacggatgaggggagggttggaaaggag
gaagaaggcaaggcaCAGTCTggtgagggcggggcggagaaagggacggg
tgggggaatcgatgggaaggggggggaagaggtggtggaaagtggggaga
gaagggtagagggaagggaagggagagaggaggagggggaggagaggaag
gaggaggaggaggaggaggaggaggaggaggaaggcgaaggtaCGGTGCC
GttcgaggagagggagaccccTTTgttggaggacggagaggccttcctgg
cccgccGGGGGGATGTCCTGCAGGGCGCCCCCGTGGGCaccgagggcagg
gaggtcaGAGCCCAGCGCCGAGGGCGACCGCGGAGGGCAGAGCCAGGCCC
GGCCGTCGTGCCAGTCCCAGGcgctcccccctcgtcgtcctcctccacct
tcccgcccccgccagcgTCCTCCGCACGCCCCAGCGggtcctcttccttc
gtgGGCGGTGTCTTCCGCGCCGTCGCCCCCGCGGTCCCGCGCGTCGATTG
CGTCAAGGTCTACAAGGGGGAGATCAAGTTCGCGTCGGGCTCGGGTGTCA
TCTACTCCCCGGAGGGTTACTTGATGACCAATTCCCTTCTGGTTCGGAAC
GCTCTAGAGCTGAAAGTGACGCTGGCAGACGGGCGCGAATACCCGGCGGA
GAtcaagggcgtggacgaggttTTGGACGTGGCCGTGCTCAAGATCATCC
CACCCATCCCGCCGGCCCcggcgtcttcccctccctccctccctaccttc
cagTACGCGCCGATCGGGGACTCGGAATCCCTGCAAGTAGGGGATTGGGT
CCTCTCCGTCGGCTCCCCCCGGTCTCCGGGTCCCTCGGTCATTCTCGGCA
TTGTCAGCGGCCTGACCAAGACCGCTGCGGAGGTGGGCCGTCCGGAGACC
CAAGTGTCCTTCATCCAGACCGACGCCTCCTTcgacgcgggcgtggtgGG
GGGGCCCTTGGTGAACGAGTACGGCGAGGTCGTGGGGATCAACAGCATCG
GGCTGAGGACCAGTAGCACGGTCCAATTCTCGGTACCCATCAACCAGCTC
aaggcggccgtggaggccttggcccgtgggcgggaggtccaccacccctc
catCGGCGTGGAGATGATGCCGATCACGCCCACCCTGGCCGCGCAGCTCA
ATCAGCAGGCCATGCTTCGGCAGGGGCAACTCCAggtgcaagaggaagag
cggatggcggaggggaagcggcagcggcaggaTGCACGCAAGGAGAAAGG
TCAGCGGCGgtcgggagggcggaggcaagttggggatgggaaggacgggg
atACAGGAGGGGCCCTGGCTCATTTCTTGAGGAAGGCGCAGCACGCCGGA
GACTTCCTCCGGCAATGGCAACAGCCGTCCGACCGTTCCacgccgctccc
tccgccatcctcttccccttcctcggtcggcccctcctcctcctcttccc
cggcTTCTCAAATCCAGTTCATccccgagggcggggccgtaGTGGTTGTC
CATGTATTGGAAGACTCGCCGGCTCAACACGCAGGGCTCCGCCACCTAGA
CATACTCCTCGAGATCGATCGATGCCCCATTTACGGAGTGGGGGACGCAC
AGCGCGTCATCCACTCATCAGGGGTAGGCCGGAACCTGGAGATCAAGGTC
CTGCGGAACACCCAGGAAGTCACCCTCCACGTTCGAACCACGGATTTCTT
GACCCTGTTCAAGAAACAGCAGGCCGCCAAGAAATACCCGGAGTTGAGGC
cgaaagtgaaggaggggagacgggtcggagaggaaggagggtggttGGAC
GGAGAAAACGCGCGGCACGagcaggtgggaggggtgccgggggagcaaga
aggcgaGCAACAGCCTGCGAGTGatgaaaggggggaagaaggccttGCAG
TGGGCGAATGTGAGGAGGTAAACGAGAAGGGAGCACAGGTAGGACGGAAG
GCGTCACCCAGAGCGGCGGCCCGAGGGGAGGATaagaggggggatgggcg
gAGCGCAAAGGAGACAGAGCGCGAGGATCTTCAAGGAGAGTGCTGGACAT
GAGTGCATAGAGGCACTCCACACTAGCGAGGTCGACCCAAAAAATGAACA
GTAGCGGCAATGTTGACAAACCCACCTGGATCTTTGACAGATGTTTGATT
GTTTCTTTGTATAGTATTACGCAGCCGCCGACAACTCTGA back to topCoding sequence (CDS) from alignment at CM002458.1:362313..365802+ >rna1881 ID=rna1881|Name=rna1881|organism=Nannochloropsis gaditana|type=CDS|length=3087bp|location=Sequence derived from alignment at CM002458.1:362313..365802+ (Nannochloropsis gaditana)
ATGCGGAAAAGCCCTTGGCGTCTCTCCATGGCCTTGGTCCTCGTCTTTCT
ACTTATCCTTTGCGGGTGCGAAAAGCTAGTGACGGCTGAAGTTTCAGCAG
GGGGCCATTCCAGGCTGGAAATAAGGCTGCAGGTAACAAGTCGCGATAGA
TATGCGATtcagggagtgggaggattCGTGCACGCACCGGGGATGTCGGA
CGGACGCCGCCTACGTCGGATGCCCTTGTCCACGTCGAGACACTCGCCTg
gcccgcctcttccctcaaCGATGGCTATCGCGCACGCCCGAGCCCGCTCT
CTGTCTGCGGGTCTTTGGCGCTTTGACAGGGAGTTTCAGCCGTCGCctgc
cgaagaggaggatggcttTGACCCCCCAGGGAAAGGCTTGCTTCGTCTCG
TCTGGAACGTGTTGCGACGCCGCTCCGTGCAAGTCGTTGGCGTGGCGGTG
CTTGCGCTCAGCTTTTTCAGAAACGGGTTGGAGCGGAAAGGCTCTGGTAA
AGCCGGTGGCATCCTGCATGGCAACGGGGTTCCCAACGCACCCGAACGAT
ACGTCCGCAGCAAGGATCCCGCAGTGACCAAGAGCCAGCAAAAAAGcgag
cgggagaagaaacGTCTGGAAAAAGAACCAAAGCAAGAGACGGAGCGGGC
GGAGCAGCCGGGACTGCGACGCGGGAAGGAGTCGTCTACACCCTTTCCTT
TGGCGGGAAAGCCCGTGCCTCTGCTGGACTCGGAGGCTCCCGTCCCGGCG
CCCGAGGGGgttcaggaggagggtagcGGCGCCGTGGGTGCGCCCAGCAG
TgagaaggacgcgggggaggagccgtTGGGGCCTGGGCCGGATACAGAGA
AGAGATTTGGCGCAGGAAAGGAGCAAGGGttggccaggaaggaggcgcgA
GGGGGGCCTCTGGGGCTCTTtcgggggtgggggcggagtaagacagaagg
agagcaggcgggcggcggccgcagggagggggagggggaaacgggccatg
ggaaggagacggatgaggggagggttggaaaggaggaagaaggcaaggca
CAGTCTggtgagggcggggcggagaaagggacgggtgggggaatcgatgg
gaaggggggggaagaggtggtggaaagtggggagagaagggtagagggaa
gggaagggagagaggaggagggggaggagaggaaggaggaggaggaggag
gaggaggaggaggaggaaggcgaaggtaCGGTGCCGttcgaggagaggga
gaccccTTTgttggaggacggagaggccttcctggcccgccGGGGGGATG
TCCTGCAGGGCGCCCCCGTGGGCaccgagggcagggaggtcaGAGCCCAG
CGCCGAGGGCGACCGCGGAGGGCAGAGCCAGGCCCGGCCGTCGTGCCAGT
CCCAGGcgctcccccctcgtcgtcctcctccaccttcccgcccccgccag
cgTCCTCCGCACGCCCCAGCGggtcctcttccttcgtgGGCGGTGTCTTC
CGCGCCGTCGCCCCCGCGGTCCCGCGCGTCGATTGCGTCAAGGTCTACAA
GGGGGAGATCAAGTTCGCGTCGGGCTCGGGTGTCATCTACTCCCCGGAGG
GTTACTTGATGACCAATTCCCTTCTGGTTCGGAACGCTCTAGAGCTGAAA
GTGACGCTGGCAGACGGGCGCGAATACCCGGCGGAGAtcaagggcgtgga
cgaggttTTGGACGTGGCCGTGCTCAAGATCATCCCACCCATCCCGCCGG
CCCcggcgtcttcccctccctccctccctaccttccagTACGCGCCGATC
GGGGACTCGGAATCCCTGCAAGTAGGGGATTGGGTCCTCTCCGTCGGCTC
CCCCCGGTCTCCGGGTCCCTCGGTCATTCTCGGCATTGTCAGCGGCCTGA
CCAAGACCGCTGCGGAGGTGGGCCGTCCGGAGACCCAAGTGTCCTTCATC
CAGACCGACGCCTCCTTcgacgcgggcgtggtgGGGGGGCCCTTGGTGAA
CGAGTACGGCGAGGTCGTGGGGATCAACAGCATCGGGCTGAGGACCAGTA
GCACGGTCCAATTCTCGGTACCCATCAACCAGCTCaaggcggccgtggag
gccttggcccgtgggcgggaggtccaccacccctccatCGGCGTGGAGAT
GATGCCGATCACGCCCACCCTGGCCGCGCAGCTCAATCAGCAGGCCATGC
TTCGGCAGGGGCAACTCCAggtgcaagaggaagagcggatggcggagggg
aagcggcagcggcaggaTGCACGCAAGGAGAAAGGTCAGCGGCGgtcggg
agggcggaggcaagttggggatgggaaggacggggatACAGGAGGGGCCC
TGGCTCATTTCTTGAGGAAGGCGCAGCACGCCGGAGACTTCCTCCGGCAA
TGGCAACAGCCGTCCGACCGTTCCacgccgctccctccgccatcctcttc
cccttcctcggtcggcccctcctcctcctcttccccggcTTCTCAAATCC
AGTTCATccccgagggcggggccgtaGTGGTTGTCCATGTATTGGAAGAC
TCGCCGGCTCAACACGCAGGGCTCCGCCACCTAGACATACTCCTCGAGAT
CGATCGATGCCCCATTTACGGAGTGGGGGACGCACAGCGCGTCATCCACT
CATCAGGGGTAGGCCGGAACCTGGAGATCAAGGTCCTGCGGAACACCCAG
GAAGTCACCCTCCACGTTCGAACCACGGATTTCTTGACCCTGTTCAAGAA
ACAGCAGGCCGCCAAGAAATACCCGGAGTTGAGGCcgaaagtgaaggagg
ggagacgggtcggagaggaaggagggtggttGGACGGAGAAAACGCGCGG
CACGagcaggtgggaggggtgccgggggagcaagaaggcgaGCAACAGCC
TGCGAGTGatgaaaggggggaagaaggccttGCAGTGGGCGAATGTGAGG
AGGTAAACGAGAAGGGAGCACAGGTAGGACGGAAGGCGTCACCCAGAGCG
GCGGCCCGAGGGGAGGATaagaggggggatgggcggAGCGCAAAGGAGAC
AGAGCGCGAGGATCTTCAAGGAGAGTGCTGGACATGA back to top
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