|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100002g148.4868.mrna |
| Orig protein id | gnl|cribi|Naga_100002g148.4868 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:348846..350291 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1876 ID=rna1876|Name=rna1876|organism=Nannochloropsis gaditana|type=mRNA|length=867bp
ATGGTCGTTCAGGGCATAGTGGATAAAGCTGCAATTCGCAGCACGGACGT
GGTCATGGAAGTAGGCCCAGGTACCGGGAATTTGACGGTGAAATTGCTGG
ATCGGGCGAAGAAAGTTGTGGCAGTAGAATACGACGTGCGGATGGTGAGG
GAGGTGCTAAAACGCGTGGAGGGGACGGACCATGCTAGAAGCCTCCACGT
AATCCAAGGGGATGTGCTCAAGGTAGCCTTGCCCTTTTTTGACGTCTGCG
TCGCCAATATTCCATACCAAATCTCGTCTCCTCTTCTTTTCAAGCTCTTG
GCGCACCGTCCCATGTTCCGCTGCGCCGTGATCATGCTCCAAGAAGAATT
TGCGCAACGCCTGACCGCCAAGCCGGGGGATGACCTGTACTGTCGTCTCT
CGGTGAACACCCAACTGCTTGCAAAGGTCGATCAGCTCATGAAAGTGGGA
CGTAACAATTTTCGTCCCCCTCCGAAGGTAGACTCGCGCGTGGTGCGTAT
TGAATTACGGAACCCCCCCCCGCCGGTAAACTTCAACGAATGGGACGGGC
TCGTGCGTTTGGTCTTCAACCGGAAGCATAAGACATTACACGCGGTGTTG
ACCACTAAGAGTGTTTTGACGGTGCTGGAGAAAAATTTCAAAACGTACAT
GGCATTACGCGGAAAAGAGAGCGGCGAGGTGGTGGCCGGCATAGAGATTG
AGGGAGGGAAGACGGGCGTTCCCATTGCTGGGGGTGTGAAAGCGTTGGTG
GAGGAGGTAGTGGCACTGCCAGCATTCGAAGGGAAACGAGCGGCGAAGAT
GGACTTGGACGATTTTCTTGCCTTGCTTGCCGAGTTCAACCAACGAGGGG
TGCACTTCTCTTCGTGA back to topprotein sequence of rna1876 >rna1876-protein ID=rna1876-protein|Name=rna1876|organism=Nannochloropsis gaditana|type=polypeptide|length=481bp
MLVARTPGLLSLHCCALSLQRLAVSSPSSLDCVLAALSLLEPSWEVDATL
IELTARPSLGCGLQGWRMTPELLPPSGGCTKWIKPLTGTDNDPLAQLARD
MWAQFHRACRVQVQSIPDPQGAQEEKGSRRLRMAGASEVPLSPPIPKTLT
ASPLRPAPLLAQLLERMRTAWSKARATHEQKAAGLRLGRAGLALVRSGLG
ADEVNADVLGHLLPLCFALMEEYEQEELQVLGYVTWCFAAHKSRGPALSS
FLPIQVQVFRRGLKVLVKRCVVLRLLLFCTTELLRLNLPSATRGERRDPT
RDQRDADGDFRDAILQDLLAALTRASPSKDPRITFALLEGLHRLVPLYSQ
DYHLVRYLRALTQALMFVPLEEGDAAVRVAALRTILLVLAQCHVMIHQHA
FETLAQVLRLYLLLVRRGEKQTEADHIVSSMCRDVANVLREKCPRHTLVN
LESFIKTLREEGGYDTELDSIWPQNEIEMGT back to topmRNA from alignment at CM002458.1:348846..350291- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1876 ID=rna1876|Name=rna1876|organism=Nannochloropsis gaditana|type=mRNA|length=1446bp|location=Sequence derived from alignment at CM002458.1:348846..350291- (Nannochloropsis gaditana)
ATGCTTGTGGCCAGGACCCCAGGCCTTCTTTCCCTCCATTGCTGCGCGCT
CTCTCTCCAGCGCTTGGCCGTCTCCTCCCCCTCCTCCTTGGACTGTGTAC
TGGCAGCGCTTTCTCTGCTCGAGCCTAGCTGGGAAGTTGATGCAACATTA
ATAGAGCTGACTGCCAGGCCGTCATTGGGCTGTGGATTACAAGGATGGAG
GATGACGCCCGAGCTTCTCCCCCCCTCCGGTGGATGCACCAAATGGATCA
AGCCCCTCACAGGCACGGACAACGACCCGCTCGCGCAGCTCGCCCGCGAC
ATGTGGGCCCAATTTCATCGGGCCTGCCGCGTTCAAGTGCAGAGTATCCC
CGATCCTCAAGGAGCTCAGGAAGAGAAGGGTAGCAGGCGCCTCCGGATGG
CGGGAGCTTCCGAGGTGCCTCTGTCTCCCCCTATTCCGAAGACCCTTACG
GCTTCCCCACTCCGCCCTGCACCCTTGCTGGCTCAACTCCTTGAACGCAT
GCGTACGGCCTGGTCGAAGGCTCGGGCGACGCACGAGCAGAAAGCCGCGG
GCCTTCGGCTGGGGCGCGCCGGCCTCGCCTTGGTGCGATCGGGCTTAGGG
GCTGATGAAGTGAACGCCGACGTCCTCGGGCATTTGCTTCCGCTTTGCTT
TGCCCTTATGGAGGAATATGAACAGGAGGAGCTCCAGGTGCTCGGCTACG
TGACTTGGTGTTTTGCGGCGCACAAAAGCAGGGGGCCGGCGCTTTCAAGC
TTCCTGCCAATCCAGGTCCAAGTGTTCCGACGGGGACTCAAGGTCTTAGT
CAAGCGATGCGTCGTCCTGCGCCTCCTCCTCTTTTGCACGACTGAATTGC
TGCGTCTGAATCTACCGTCTGCGACGCGTGGGGAGAGACGTGACCCTACC
CGGGACCAGAGGGACGCGGATGGTGACTTCCGAGATGCCATCCTTCAAGA
CCTTCTCGCGGCGTTGACCCGTGCGTCGCCCAGCAAGGATCCTCGCATAA
CTTTTGCCTTGCTTGAAGGACTGCACCGTTTGGTGCCTTTGTACAGTCAA
GATTATCATTTAGTCCGTTACCTGCGCGCCTTGACCCAGGCCTTGATGTT
TGTCCCCCTGGAAGAAGGCGATGCCGCCGTCCGCGTTGCGGCTTTACGCA
CAATCCTTCTTGTCCTCGCGCAATGCCATGTTATGATTCATCAGCATGCG
TTTGAAACGTTGGCACAAGTATTGCGTTTGTATCTCCTTCTTGTGCGCCG
AGGGGAAAAGCAGACGGAGGCCGACCACATCGTGTCATCCATGTGCAGAG
ATGTGGCTAATGTCCTCAGAGAAAAGTGCCCAAGGCACACCTTGGTAAAT
TTAGAATCATTCATCAAAACTTTGAGGGAAGAAGGAGGCTATGACACGGA
GCTAGACAGTATTTGGCCTCAAAATGAAATAGAAATGGGAACGTAA back to topCoding sequence (CDS) from alignment at CM002458.1:348846..350291- >rna1876 ID=rna1876|Name=rna1876|organism=Nannochloropsis gaditana|type=CDS|length=1446bp|location=Sequence derived from alignment at CM002458.1:348846..350291- (Nannochloropsis gaditana)
ATGCTTGTGGCCAGGACCCCAGGCCTTCTTTCCCTCCATTGCTGCGCGCT
CTCTCTCCAGCGCTTGGCCGTCTCCTCCCCCTCCTCCTTGGACTGTGTAC
TGGCAGCGCTTTCTCTGCTCGAGCCTAGCTGGGAAGTTGATGCAACATTA
ATAGAGCTGACTGCCAGGCCGTCATTGGGCTGTGGATTACAAGGATGGAG
GATGACGCCCGAGCTTCTCCCCCCCTCCGGTGGATGCACCAAATGGATCA
AGCCCCTCACAGGCACGGACAACGACCCGCTCGCGCAGCTCGCCCGCGAC
ATGTGGGCCCAATTTCATCGGGCCTGCCGCGTTCAAGTGCAGAGTATCCC
CGATCCTCAAGGAGCTCAGGAAGAGAAGGGTAGCAGGCGCCTCCGGATGG
CGGGAGCTTCCGAGGTGCCTCTGTCTCCCCCTATTCCGAAGACCCTTACG
GCTTCCCCACTCCGCCCTGCACCCTTGCTGGCTCAACTCCTTGAACGCAT
GCGTACGGCCTGGTCGAAGGCTCGGGCGACGCACGAGCAGAAAGCCGCGG
GCCTTCGGCTGGGGCGCGCCGGCCTCGCCTTGGTGCGATCGGGCTTAGGG
GCTGATGAAGTGAACGCCGACGTCCTCGGGCATTTGCTTCCGCTTTGCTT
TGCCCTTATGGAGGAATATGAACAGGAGGAGCTCCAGGTGCTCGGCTACG
TGACTTGGTGTTTTGCGGCGCACAAAAGCAGGGGGCCGGCGCTTTCAAGC
TTCCTGCCAATCCAGGTCCAAGTGTTCCGACGGGGACTCAAGGTCTTAGT
CAAGCGATGCGTCGTCCTGCGCCTCCTCCTCTTTTGCACGACTGAATTGC
TGCGTCTGAATCTACCGTCTGCGACGCGTGGGGAGAGACGTGACCCTACC
CGGGACCAGAGGGACGCGGATGGTGACTTCCGAGATGCCATCCTTCAAGA
CCTTCTCGCGGCGTTGACCCGTGCGTCGCCCAGCAAGGATCCTCGCATAA
CTTTTGCCTTGCTTGAAGGACTGCACCGTTTGGTGCCTTTGTACAGTCAA
GATTATCATTTAGTCCGTTACCTGCGCGCCTTGACCCAGGCCTTGATGTT
TGTCCCCCTGGAAGAAGGCGATGCCGCCGTCCGCGTTGCGGCTTTACGCA
CAATCCTTCTTGTCCTCGCGCAATGCCATGTTATGATTCATCAGCATGCG
TTTGAAACGTTGGCACAAGTATTGCGTTTGTATCTCCTTCTTGTGCGCCG
AGGGGAAAAGCAGACGGAGGCCGACCACATCGTGTCATCCATGTGCAGAG
ATGTGGCTAATGTCCTCAGAGAAAAGTGCCCAAGGCACACCTTGGTAAAT
TTAGAATCATTCATCAAAACTTTGAGGGAAGAAGGAGGCTATGACACGGA
GCTAGACAGTATTTGGCCTCAAAATGAAATAGAAATGGGAACGTAA back to top
|