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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100002g161.4935.mrna |
| Orig protein id | gnl|cribi|Naga_100002g161.4935 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:319969..321390 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1863 ID=rna1863|Name=rna1863|organism=Nannochloropsis gaditana|type=mRNA|length=4579bp
GGGCACCCAAAAGTTCACAGAATGACAAACTTTCTAAATACGTTACAGGG
ATTTGGCAGGGACATAACGTGCAAGCGGGTGGAGAGACGAACAGAAAGGA
GCTTAAAGTTTGGTGTATCCTTCTATTGCTCCCCATTCGCCTCCTCTGTC
TTGGATGGCCACTCTCGACGAGCTATTGTTTCACCAACCACAGCCGCGTA
TGGGGATCGACGACATATCTGTCGAAAACTCTGGCGGGGGTGGGATTTTT
TTGAAAAATTTGTTCAAAAGCCTCATTCAGGGTACTCGGGCCTCGAATGC
CATTCCGGCAGGGGGCGGATTAGGGAACGGTGAGGCCTCTGACTTTGCTT
TTCACGCCGCCACTTCCTCAAATTTTGCCGACAAGAGCTTAGACACAAGC
AAGGAGACGTTGGCTCTTCTTAAACAATTGGTTGATTATATCATTAAGAC
CGGTGGGAAGGACCAAGATGAAAGCAAGCAAGAGGAGGAGGAGGAAGCCC
TCATAGCGGGCTTGGACGACGTGGAGGACCCGGATGCTTTCGGAAACCTA
GCTGACTTGATAGAAGACCTGCTGGACCACGTGGAATATTTTCTGAGTAC
TGCGAAGCGCGGGGAAGGGGAAGGTATCAAGGAGGCGGGAGATCAAGAAG
AAAACAAGAAGCTCGCTTCGGAATGGGCACGTTTGCGTCGCATGGCGGGG
GCGGCTAGACAGACAGCCAGCCGGTACAACACGATGTTGTCGCAAACTTT
GGATATCCCGAAACCGCAACACGCTTTCCAGGATGAAATTGACAACCGGC
GGGAGACCTGTTTCCGGCCTTGTCCCCATGGAGATGGGAAGAGCGTGGAG
GGGGGGAACGCTTCGGAGATCCCGCATCCGTGTGAGACTGAGATCCGGAA
CTTTACCTACTCAACTTGGCAATTACAGGTTCCCGCGGAGAATGACATGC
AAGTCCCCTTATCGTTACAGGAGAGCAGCCCGGCCGGCCTGGTCGCCAGC
CCGGAGGCCTTGAGGGAAATGGTGCAGAGCATCCGTGAGGAGCTGGAGAA
GGAGGACGAGAAGGCGATAGCTGTGGATTTGGAAGCGCATAGCCTCCGGT
CATTCCAGGGATTGGTCTGCCTGATGCAGATCTCTACACGGGAGAGGGAT
TTCTTGGTGGATACCTTAGCCCTCCGGCGGGAGGTGGGCCCCCTCTTGCA
CGACCTGTTCACCGACCACACCGTCCTCAAAATTTTCCACGGGGCGGAAA
GCGACATCAAATGGCTGCAGCGTGACTTTGGCTTGTACGTGGTTAATCTG
TTCGACACCTTTGTGGCTGCCCAAGCTCTGCACATGCCGAAGAAGTCTCT
GGCGTACCTGTTGCAACACTACGTGGGTGTAGTGCTGGACAAACAGTACC
AGTTGGCGGACTGGCGCGTCCGGCCCCTGCCGGAGAAGATGCTGCACTAC
GCCCGGGAGGACACCCATTACCTTCTGCACCTCCACGACTGCCTCCGCCG
GGATTTGGGCCGAGAGCAGGGGAGGATACAAGAGGTGCTGGAGGGGTCCC
AGGCGGTCAGTTTGTTGCGGTACCGGAAGGAGACGTTTGATCCAGAGGGC
TACGGGCGTCTCTTGCAGGGCCCACGGCGCTGGACAGGCGAGAGGGGGGA
GGGAGGGAGGGAAGGCGGATTGGCACCGGTGCAGAGGGAGACCCTGAAAG
CACTTTACGATTGGAGAGATCGCGTGGCGCGGGAGGAGGACGAAAGCCCC
GGATATGTCTGCCCAGACAAATTGCTCTTGCGTCTGGCAAAGGTGCGGCC
TCTTACCCGCGGTGGGGTACAGGAATGTGTGGGCAGCGGGAGTGCCTTGC
CGCCGTTGGTCGGGGCTCGTATGGAAGACATGCTACAGGTGGTCGGGGCG
GCTGGGAAAAAAGAAGGGGAAGAAGAGGACAAAGCCCGCGTCTTCTCTGC
AGGGGGAGGAGAGAGCAGCCTTGGGGACGGGGGGACTCAAAGGAGGGTTA
ACACTAGGACGAGTGAATCAAAAGCGACCGCGACTACCGTCCATGCGGAC
GCTGAGAAGACGCCCTTGTCAGACTACGCGTTCCCTGTTTATGTGCCCGC
CCCTCTGGAGGACTCTCTTTCACAAGAGCGTGTGAGCAGCACGATTCACC
CTCCCCCCACCCTTCCTCTTCCTCCCGTCCTGAACACGGAAGAGCTGTAT
TTGTCAGCTGGGTGGACGGTGGCGTCCGATGGCCTTCAGAGCATGACGCC
GGTATCCACCGGGGCGGGCCGGGAGGGAGTACGGGCGGGAGTGGTAGCGG
CCACAGGCAACGAAGGTTTGGAAAGCCATCGAGGCCTTCAGCATTCCATA
GGTTTGTCCGTCCGCGTACGCTCAAGCAACGTGGAGGAGGCATCGGCCCC
TACGCTGCAGGCAGGGGTTGAGGAAAGGGAGGGAGGGAGGGAGGGAGGAG
GAAAATGCACCGAAGGGGACGCGCAAGGGCCCTACGCCACGGCTTTGGAC
CCGCTGGCTGGGGCTCGCGCGCTTTTGAGAAAGGAACAAGGTCTACCACC
TGTGAACAACGCCGAGGTCGATTTCGACGGTGACTCCGAGGAGGAAGAAG
AGGAAAAGGGAGAATGCGAGGAGGAGGGCGAGGCCGACGAAGAGGCGATG
CCGCGCTCCATCGCAGACATATACAGGATATCGAACCGGAACCGGCGGAG
AAACAAAGAAAAGAAGAGGCAGCAGGACACTAGGAGCGAAATGTCGGCCG
GCGCGGACGGCGGTGCAGGGGAAGGGGTCGAAGGCCCCGCGAGGCTAGGA
ACCACTCGATCGTCATCGCCTACCCCGGGCGACACCAGTCTTTCCCTTCC
CCTCGATCCCGAGCTCCACGAGTATTTCGGCGACGCTCTTGACAACGCGC
CGAGTCCCGTGCCCCTGAGCCACGAGGGGGTCTCTGTGCTGACGAACAAA
CGGACGCGGCCCGAAGACACGGAGGAAATCGTGAAGTTCATGAGCAGTAT
TGGGTGGGTGGATGCCAATGCACCGGCCTTGCCTTCCTCCTCTCGTGCCG
TGGCGCTACCCGAGCAATTTCTTCCACACCGCCAGGCGCTCTTGCAGTCG
CAGGTCCAGCCGCCCAACCCCCACACGGGCGCGCATCAGCCACAGCAGGA
CCCGTATCATTGCCGGCGTGGGACCCTCAATCATGACACTCAGCACGCTC
AGTTTGAGGCCCCGAGACTGAAAGGAGACGGAGGAGAGGGGGATCATGGT
GGTTTCGGGCTCCCCCCCCCGGACAGTGCGGCCTGGTCCCGGCAGCAGCA
CCTCTGGCCAGAGCAGCCCCCATACGTGCAGCAGCAACAATGCGGAGGTC
GAGGGAGAGGGAGCAAGACAGTGGGGCCACCCCGGGGGGCTCTGGTCGAT
GGTACTGGAGCTGGAGGAGTCAGGGGGCGGGACGGGCTTTCTTCTACTCA
AAATTTCCACATTAACAAGGCCGCCGTAGAATCGTCTCGGGGACCGCATG
GCGCTCCTTCTCCTCCTTCTTACAACGCAAGCTCGATCAATACGAAGGCC
TACCCTCATCAGCAGGCCTTGCGACAACCGATGGAGAGCAGCTCTCGCCC
ACCTTCCCTAGCTCCTCCCATAGGGCTGAACTTGAATACACAACAAAAGC
TACGCTCACAGCAGCTGCGGTACCAAGAACATCGTCAACAGCATCAACCT
CAGCACCAGCAACATTTACCACCACAACAGTTCCATAAATAGCAACGGCG
GCGAGAGGAGAGCAGCCGAGGCGATGGCTTGCATATTGAAAGTAAGGAAC
TGTTGTGCACGCGGGTACAGAGAAGAGAGAGTACAACAGGCGAAGTGCGC
TTTAAAGAAAGCCGCTTGGAGGCATTTGGTAATTAGAACGAGAGAAGATT
TGTGATTTTTCCTTGACCAAAGCCATGGTAGATTGGAGAATCGCGGGGCT
CGACGGAAGGGGAAAGTAGGACGTAGAAGAGTCTCTTTAAATTCTTTCTC
TCCTAACTCTCCCCTGGGACCTGCTCAATCGACATATCTTCTGAAGGCGC
TCGGGCATGCGTGCGGTCAGAACCAACCTGTTGGCTGTGCATTGTTATAA
TCGAAGGCCCTTCGGGAGACGCCCAGGACGAGGATAGGGGAGACACAAGA
GGGGTAGGGGAAAAGATGCCAGCGCACCAGAGGCCGAGGGAGGGACAAAG
ACTGGACCTCAAGAAGGGTGGAGGTTTCTGGCAGGTGGCTCTTCGTGATG
AGGAAGGGACAGTGCATATCGCTGGATTTAAGGAAATGCACATGTCTCGA
TTGACCCTACAAAGGGGTCAAATATATGATGAAATTGATTCACTGCTCGA
CACTTGCGGACAATGGCCCCCCATGTTGCCGCATAAGATCGCACTGTAGC
GCTTTGTCACATTTGTAAACTTTGACACGATGCACGTAAGATTGAAAAGG
TTCGACTTAAAAAGCTTGTGGGCCTTCAGAGGGAAAGAACATCGGAGGGA
ATTTCGACAGAGGCATGGCAATAAAGAAGGAGACCCACAATCACTGCAAA
ACAACGGCCCTAATAAAGATAGTCAAACC back to topprotein sequence of rna1863 >rna1863-protein ID=rna1863-protein|Name=rna1863|organism=Nannochloropsis gaditana|type=polypeptide|length=127bp
MSRAFFLVALLLAVCVTVSTAFMTPAPLALRTGSQQVQQKGRAAGNVVMA
CRFNAKREKRKRNGENARKYRMKNTGPKYLIIKTRKRASKAEYSKRLEQY
EMDFTAQIFQVQDIDSLLAGASDGGDA back to topmRNA from alignment at CM002458.1:319969..321390- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1863 ID=rna1863|Name=rna1863|organism=Nannochloropsis gaditana|type=mRNA|length=1422bp|location=Sequence derived from alignment at CM002458.1:319969..321390- (Nannochloropsis gaditana)
GGTGGGGAGATGTGGTGCTTTTCATTCGTGCGCCGATGTGCGCCTGATCG
TTCTTTGCTTCGATGTTCGGGGCCGCATGGACCATTCAGTAGGCATTTTC
TCACCACCCACGTCCCACATCGAGCCAGACTCTGAGTAGTATCCGCCGGG
CCCCCGCCCATTCTACTCCTCTCGTATAAGCACTTCTCATAGCACCCGCA
CACAATCACGAACAGCAACATGTCACGAGCATTTTTTCTCGTTGCCCTTC
TTCTGGCGGTCTGTGTAACCGTGTCCACGGTACGTGTTCATACGAGAGTT
GACCAGTCCCTAAGGGAGGGAGAAACAGGCCGGAGCTCGACACGTAGGAA
ACCAAAGAGGCAGAAAGATGAGCGAAACTCACTCATGTCGATCTAATCTT
TTCCGTGGCAGGCATTTATGACCCCAGCACCGCTGGCGCTCCGTACCGGT
GAGTGAATTGAAGGCGCTGAGTGGGACGGTTCTAACTTGCGTGTAGATGG
AAAACCATTTGTGGTTTCCATCTACGTAGAGTAGAGCTTTCACGATTTTA
ACTCTGTATGATGCAGATCTAACTTTGGTATAATTATCTTAACAACACCG
TATCACAATAGGCTCCCAGCAAGTGCAACAAAAAGGTCGCGCCGCCGGGA
ATGTGGTGATGGCGTGCCGTTTCAATGCGAAACGCGAGAAGAGGAAACGA
AACGGGGAGAATGCCCGCAAATACCGCATGAAGGTAAAGTGACGCAACAG
GAATAAGCATGGAATCCGTTGGAAGCAGAAAGAAAGGAAGGAGAGGTTTC
GAATGCCGACACACCGTGACACGGCCGAGCGGGGTCAGTTTGGGGCCTCT
TTGGCAGAGCTTCTCTCTCAGCATCCTCTCTGTCCAACTTATCGATCCAC
AGAACACGGGACCCAAGTACTTGATCATCAAGACGCGTAAACGGGCGTCC
AAAGCCGAGTACAGCAAGCGTCTGGAGCAGTACGAGATGGACTTCACGGC
ACAGATTTTCCAGGTCCAAGACATTGACTCACTTCTTGCGGGGGCCTCGG
ATGGGGGCGACGCATAAAGCGCAGGACATTGTGACTGAGAAGGCAACGAG
ACGGAAGCGGATTTAGTGATGTGTAGGAGAGATCACTGCGGGCATGGGGG
GGGGGATGCAAGCGCCTTACTACTATAAATATGGATGGAGTGAGAGAGGG
GTGAGACCTGACACCCGCCAAAGGCTGGAAAGCGTTGTCGTGCTTGCTCT
TGTGATGAGATTCTGTGAGATTCAGGCGTCGAGCGGATGAATTTGGCATT
TTCTTCCCGCCTGGAGAAAAGCTCACACTGGGAGAGGACCGTGGACGTTG
CCGCGTTCAGCCAGCGAGGAGAAGCTTAACAAGAATATTAAAAAAAACAG
ACACAAGGGTTTGACTATCTTT back to topCoding sequence (CDS) from alignment at CM002458.1:319969..321390- >rna1863 ID=rna1863|Name=rna1863|organism=Nannochloropsis gaditana|type=CDS|length=1536bp|location=Sequence derived from alignment at CM002458.1:319969..321390- (Nannochloropsis gaditana)
AACACGGGACCCAAGTACTTGATCATCAAGACGCGTAAACGGGCGTCCAA
AGCCGAGTACAGCAAGCGTCTGGAGCAGTACGAGATGGACTTCACGGCAC
AGATTTTCCAGGTCCAAGACATTGACTCACTTCTTGCGGGGGCCTCGGAT
GGGGGCGACGCATAAGCTCCCAGCAAGTGCAACAAAAAGGTCGCGCCGCC
GGGAATGTGGTGATGGCGTGCCGTTTCAATGCGAAACGCGAGAAGAGGAA
ACGAAACGGGGAGAATGCCCGCAAATACCGCATGAAGGCATTTATGACCC
CAGCACCGCTGGCGCTCCGTACCGATGTCACGAGCATTTTTTCTCGTTGC
CCTTCTTCTGGCGGTCTGTGTAACCGTGTCCACGAACACGGGACCCAAGT
ACTTGATCATCAAGACGCGTAAACGGGCGTCCAAAGCCGAGTACAGCAAG
CGTCTGGAGCAGTACGAGATGGACTTCACGGCACAGATTTTCCAGGTCCA
AGACATTGACTCACTTCTTGCGGGGGCCTCGGATGGGGGCGACGCATAAG
CTCCCAGCAAGTGCAACAAAAAGGTCGCGCCGCCGGGAATGTGGTGATGG
CGTGCCGTTTCAATGCGAAACGCGAGAAGAGGAAACGAAACGGGGAGAAT
GCCCGCAAATACCGCATGAAGGCATTTATGACCCCAGCACCGCTGGCGCT
CCGTACCGATGTCACGAGCATTTTTTCTCGTTGCCCTTCTTCTGGCGGTC
TGTGTAACCGTGTCCACGAACACGGGACCCAAGTACTTGATCATCAAGAC
GCGTAAACGGGCGTCCAAAGCCGAGTACAGCAAGCGTCTGGAGCAGTACG
AGATGGACTTCACGGCACAGATTTTCCAGGTCCAAGACATTGACTCACTT
CTTGCGGGGGCCTCGGATGGGGGCGACGCATAAGCTCCCAGCAAGTGCAA
CAAAAAGGTCGCGCCGCCGGGAATGTGGTGATGGCGTGCCGTTTCAATGC
GAAACGCGAGAAGAGGAAACGAAACGGGGAGAATGCCCGCAAATACCGCA
TGAAGGCATTTATGACCCCAGCACCGCTGGCGCTCCGTACCGATGTCACG
AGCATTTTTTCTCGTTGCCCTTCTTCTGGCGGTCTGTGTAACCGTGTCCA
CGAACACGGGACCCAAGTACTTGATCATCAAGACGCGTAAACGGGCGTCC
AAAGCCGAGTACAGCAAGCGTCTGGAGCAGTACGAGATGGACTTCACGGC
ACAGATTTTCCAGGTCCAAGACATTGACTCACTTCTTGCGGGGGCCTCGG
ATGGGGGCGACGCATAAGCTCCCAGCAAGTGCAACAAAAAGGTCGCGCCG
CCGGGAATGTGGTGATGGCGTGCCGTTTCAATGCGAAACGCGAGAAGAGG
AAACGAAACGGGGAGAATGCCCGCAAATACCGCATGAAGGCATTTATGAC
CCCAGCACCGCTGGCGCTCCGTACCGATGTCACGAGCATTTTTTCTCGTT
GCCCTTCTTCTGGCGGTCTGTGTAACCGTGTCCACG back to top
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