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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100002g166.4883.mrna |
| Orig protein id | gnl|cribi|Naga_100002g166.4883 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:311788..314503 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1861 ID=rna1861|Name=rna1861|organism=Nannochloropsis gaditana|type=mRNA|length=1286bp
CCTGACCAATGAAAAGCTCGCCTGCCTGGTTCTTATATACAGGCATACCC
GTCATCATTGACATAAGAACTGACAGAACGCCTACAACGGTCGAAGCCAC
GTTCGCTCCTGCGCACTCTCTTTTAAGAGCGCCGACTCACTTTATCAACA
TGACCCGTAATGTTCCGCCCCTCTTCAATTTCGACTTCCCGTCCTGCGAG
TATATCACGCAACATCCGCGCACTCACGAGCTGCTAGGCTTTGTACTGGC
TGGCGTGGCCATCGGCCTCATCATTATAACAGTCCTAACCGTGTATCCGG
GAGAGCCTTTCGACTCTTCTGTACTGGGACCTATACACTGCAAGCCATTG
CAGTCAGAAAGCGATCGAAAAAGATTTCAAAGACTTGGGGACAAGCCGGA
GGAGATGGATGTAAATGTAGATTGTAGGCGTACCAGCACTTGTTCGGGGG
CGCATGCAATTACGTCAAAGATGTGGAATTATGACTCCAGCGGAGACAGC
TGTGACATTTTCCCAAGCAAGATTTCAAGCATCCGCCACGACTGCACCGT
TGACAGGGTTAAGAGTCATTTTTCTCCCCTCTCGACCACCCGGAAATCTC
GCTGCAATGGACAAGAACAGCAAGCCCAGGCTGACGCACTCCACCGCCTT
TTGCTTCGGGAAGACCGCGTGTGGCAGCAATTTCAACGCCTCCCTCGGAC
TTTTCAGAGCACGCTGGGTTTATCGGAATCTCAAGTGCGTGCGGCGATCC
GTCAAGAGGTATCGCAGGCAGAATTCGAGGTCCCACCGGGAACAGGTACC
GAGACACTCCCAAAGGGAGTTATCGTCGACCCTATGGGCATGTCAATGCG
AGTGAACCTAGCCTTCTATCTGATTGCTTTCGGCGCCTTGGTATATTTCG
TCGACATGGACTATGGTTATGCAGCCACATGCCTGTTCACTCGATGGTTT
CCGAAAGAGGCAGAAGTATTAGGGTTCAAACCGGTTAGTGATTAAGCATG
ACTGAGACAGCTTCCATGTGATTTGTACAAGGGAACTAGTTAAATCCAAG
CAGTCTGAGGTTTATGTGAATAGATACGCACGTGTTTGTAAATGTGGATT
GTGTACATGCAAAGGTAATGAAAGCTAAAATGCATGGATTGAAGGCATAG
ATGGACATCTTTCCTACGTTGGCAAGGACTTTAAGTTAAGATGCTGAGTA
AACCATACCTGGGAGAGTTCCGGGAATCGCCAGATTTGTGACAAACGTGT
GGAAGAAAAACGAAATGAATGTCTTTCTCAAATACC back to topprotein sequence of rna1861 >rna1861-protein ID=rna1861-protein|Name=rna1861|organism=Nannochloropsis gaditana|type=polypeptide|length=512bp
MRRAGLVAALTYAAFAAAEDAAPAVTSLVNGQTADVKSALQNILIQTEDA
KPASITLGDAKTPMGISISNQPGEEAIVLVAPDLTVAPKVGQVGCYTIGD
DVSKIALLMCEDKDSAATPVPDKEKDGQAFAWVKGTLTNEGPEAICQLKF
ASNDLKLGMAAIETVPKELENLTPFKLEPQESINYSFLLPIDAKEMAAPL
VGIQDTLGPCKMIEKAKEALAAGKLVGGNTLADSGKAASDALAKGSDVAK
KAADNANAAAEEALKAAKNSQVATDTENPDYGDDDDGDESTGSSTEMTAK
DQLAQSADDSADDDDGDESTGSSTEMTAKDQLAQSADDSADDDGTSGDDG
SPTELTAKSAIKGIKDALTGAADATVKAAQEATAATQAAAGGAVDSAQGA
AGAAADAAQGAVDSATGGAQAAADSVSGDVLADDDNAEAATAGDTADEAK
SAVEKAAGKVKDAAANVPKAANALDMNGDGADDEATSPAPKVGASLVGLF
TVAVVVAAQFLL back to topmRNA from alignment at CM002458.1:311788..314503+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1861 ID=rna1861|Name=rna1861|organism=Nannochloropsis gaditana|type=mRNA|length=2716bp|location=Sequence derived from alignment at CM002458.1:311788..314503+ (Nannochloropsis gaditana)
TAAGTGATTGTCGTGGGAAGGTGCTCCGcttgagaaggagagcgacAACG
CCGTTTCGATTTGAACGCGGTTGGGTTTCTGTTTCTCCGGCACTTGCGAT
ACGACCATCTTTCCCGTTTTACCTTGCTTCCTCGCCATGCGTTTTCGTTC
GCACATGCAACTGTCGATCTGGTGTGCAGCGCAATGAAACTCTGTGTGTG
CGTTCAATTAAGACGTGGCCCCGGTCACTGTTCTGTCGCCATCGACGTAT
TGAAGGTGTTTGTGGTCGATCTATAATTATAGCTTTCGCTTCTCATTTAA
AGGAAGCCTTACATCCAATTGCCCTTCTCGGTTCCGGTAAAAGATTCTGT
CGAAGTGATTAAGTCGATAACACACACCGCTTACAACTCACAAACAGCCA
AAGAACACTTCTACTCTTACCACCACACCTAAATTGAACATGCGTCGCGC
TGGTCTTGTCGCTGCTCTCACTTACGCCGCCTTTGCTGCAGCGGAGGATG
CCGCTCCTGCTGTCACATCTTTGGTGAATGGCCAAACCGCGGACGTTAAG
TCCGCCTTGCAAAACATTCTTATTCAGACTGAGGATGCGAAGCCCGCTTC
GATTACCCTGGGCGACGCGAAGACCCCCATGGGTATCTCCATCTCGAACC
AACCTGGAGAAGAAGCTATTGTGTAAGTGTGAAAGAGGGGTCGAGAAGAA
CCCAAATAGCATGGCCGATAAAAAAAGGGATGTGTTGAGCAGCCACTAAT
TTCTCTGTCTcttgctcctgtcctcccaaTGAGCAGGTTGGTGGCCCCAG
ATTTGACTGTGGCTCCGAAGGTCGGCCAGGTTGGCTGCTACACGATTGGT
GATGATGTCTCCAAGATCGCTTTGCTCATGTGCGAAGATAAGGATTCCGC
CGCTACTCCTGTtcccgacaaggagaagggtaAGTCTAGGATAATTAAAA
CATTAAGCCAGTCATTTTCCACGTCAACGACCCAAGTCTCTGTCAATGCT
TGAAATGGTCTTCGTCGCATTACAAATGATGAAAATCCCCGATACGCATC
GCAGACGGCCAGGCCTTCGCGTGGGTGAAAGGCACCCTCACGAACGAGGG
CCCCGAAGCTATCTGCCAGCTCAAGTTTGCTTCGAACGACCTTAAATTGG
GCATGGCTGCGATAGAAACCGTCCCCAAGGAGCTTGAGAATCTGACACCC
TTCAAGCTTGAGCCCCAGGAGAGCATTAACTACAGTTTCCTTCTTCCGAT
CGACGCGAAGGAGATGGCCGCGCCCCTGGTTGGGATCCAGGACACGCTGG
GACCCTGCAAGATGATTGAAAAGGCGAAAGAGGCCTTAGCTGCCGGGAAA
TTGGTGGGAGGTAACACCCTCGCGGACTCGGGGAAAGCGGCCAGTGATGC
GTTGGCGAAAGGGAGTGATGTGGCCAAGAAGGCCGCTGACAACGCCAACG
CCGCGGCTGAGGAAGCACTAAAAGCCGCTAAGAACTCTCAGGTTGCAACG
GACACGGAGAATCCCGACTAtggcgatgatgatgatggcgacGAGTCTAC
GGGGTCCTCGACAGAAATGACTGCCAAAGATCAGCTGGCGCAGTCAGCGG
ATGATTCCgccgatgatgatgatggcgacGAGTCTACGGGGTCCTCGACA
GAAATGACTGCCAAAGATCAGTTGGCGCAGTCAGCGGATGATTCCGCCGA
CGACGATGGCACCTCAGGTGATGACGGGTCGCCGACCGAGCTGACGGCCA
AGTCTGCAATCAAAGGTATCAAAGATGCCTTGACCGGCGCCGCTGATGCC
ACCGTGAAGGCGGCTCAGGAAGCTACAGCGGCAACTCAGGCGGCCGCTGG
AGGGGCCGTGGATTCCGCCCAGGGCGCAGCTGGGGCCGCCGCAGACGCCG
CTCAAGGTGCGGTGGACAGCGCCACGGGCGGGGCTCAGGCTGCCGCGGAT
TCCGTCTCTGGGGACGTCTTGGCGGACGATGACAACGCGGAGGCCGCGAC
GGCCGGAGATAcggcggacgaggccaaGTCCGCGGTGGAGAAAGCCGCTG
GGAAGGTGAAAGACGCCGCCGCCAACGTGCCCAAGGCGGCCAATGCCCTG
GACATGAACGGTGATGGCGCGGACGACGAAGCGACCTCTCCCGCGCCCAA
GGTGGGGGCGTCCCTCGTCGGGCTTTTCACCGTGGCCGTCGTGGTTGCTG
CCCAGTTCCTCCTCTAACGCAGAAACGTATTTTCATGCGTGACTGCTGGC
GTTTCAGACTAGGCTAAGAAGAATGGGGTCAGATTGAAGAAGTATTAAGT
TTGTTAGTGCGCGACAGTAGGCGACATCTCTTGTTTTCCTGTGATTTTTG
GCTGTTTTCCAAGCAAACCCTATGTATGAACGACGCGCCGGGACGAAAAT
TGGGGCCTAAAAGTTAGATTGAAGGCAAGTAGGATATCAATCATTGCCAG
CACGATTTTTAGAGACGTTCATGATTGCATGAAATATCaatgagaggaag
ggaaggaagacaggcgGATCAAAAAAAGCTCGAAGGTGAGCGTCCATTAG
ATGAATAAAAGTTCTGATTTAATGGTGTTCACCGTGGGGAAATGAAAAAC
ACTTGGATCCATAATCATCTTGGATTTTAGTTGAGATCGAAACACGACAA
TTACGGATTTGCTCTGAGAGGGAAGGTAAAAAAAGAAGATATTACTCTAC
ATTTTCGAAGAGACTT back to topCoding sequence (CDS) from alignment at CM002458.1:311788..314503+ >rna1861 ID=rna1861|Name=rna1861|organism=Nannochloropsis gaditana|type=CDS|length=4617bp|location=Sequence derived from alignment at CM002458.1:311788..314503+ (Nannochloropsis gaditana)
ATGCGTCGCGCTGGTCTTGTCGCTGCTCTCACTTACGCCGCCTTTGCTGC
AGCGGAGGATGCCGCTCCTGCTGTCACATCTTTGGTGAATGGCCAAACCG
CGGACGTTAAGTCCGCCTTGCAAAACATTCTTATTCAGACTGAGGATGCG
AAGCCCGCTTCGATTACCCTGGGCGACGCGAAGACCCCCATGGGTATCTC
CATCTCGAACCAACCTGGAGAAGAAGCTATTGTGTTGGTGGCCCCAGATT
TGACTGTGGCTCCGAAGGTCGGCCAGGTTGGCTGCTACACGATTGGTGAT
GATGTCTCCAAGATCGCTTTGCTCATGTGCGAAGATAAGGATTCCGCCGC
TACTCCTGTtcccgacaaggagaaggACGGCCAGGCCTTCGCGTGGGTGA
AAGGCACCCTCACGAACGAGGGCCCCGAAGCTATCTGCCAGCTCAAGTTT
GCTTCGAACGACCTTAAATTGGGCATGGCTGCGATAGAAACCGTCCCCAA
GGAGCTTGAGAATCTGACACCCTTCAAGCTTGAGCCCCAGGAGAGCATTA
ACTACAGTTTCCTTCTTCCGATCGACGCGAAGGAGATGGCCGCGCCCCTG
GTTGGGATCCAGGACACGCTGGGACCCTGCAAGATGATTGAAAAGGCGAA
AGAGGCCTTAGCTGCCGGGAAATTGGTGGGAGGTAACACCCTCGCGGACT
CGGGGAAAGCGGCCAGTGATGCGTTGGCGAAAGGGAGTGATGTGGCCAAG
AAGGCCGCTGACAACGCCAACGCCGCGGCTGAGGAAGCACTAAAAGCCGC
TAAGAACTCTCAGGTTGCAACGGACACGGAGAATCCCGACTAtggcgatg
atgatgatggcgacGAGTCTACGGGGTCCTCGACAGAAATGACTGCCAAA
GATCAGCTGGCGCAGTCAGCGGATGATTCCgccgatgatgatgatggcga
cGAGTCTACGGGGTCCTCGACAGAAATGACTGCCAAAGATCAGTTGGCGC
AGTCAGCGGATGATTCCGCCGACGACGATGGCACCTCAGGTGATGACGGG
TCGCCGACCGAGCTGACGGCCAAGTCTGCAATCAAAGGTATCAAAGATGC
CTTGACCGGCGCCGCTGATGCCACCGTGAAGGCGGCTCAGGAAGCTACAG
CGGCAACTCAGGCGGCCGCTGGAGGGGCCGTGGATTCCGCCCAGGGCGCA
GCTGGGGCCGCCGCAGACGCCGCTCAAGGTGCGGTGGACAGCGCCACGGG
CGGGGCTCAGGCTGCCGCGGATTCCGTCTCTGGGGACGTCTTGGCGGACG
ATGACAACGCGGAGGCCGCGACGGCCGGAGATAcggcggacgaggccaaG
TCCGCGGTGGAGAAAGCCGCTGGGAAGGTGAAAGACGCCGCCGCCAACGT
GCCCAAGGCGGCCAATGCCCTGGACATGAACGGTGATGGCGCGGACGACG
AAGCGACCTCTCCCGCGCCCAAGGTGGGGGCGTCCCTCGTCGGGCTTTTC
ACCGTGGCCGTCGTGGTTGCTGCCCAGTTCCTCCTCTAAATGCGTCGCGC
TGGTCTTGTCGCTGCTCTCACTTACGCCGCCTTTGCTGCAGCGGAGGATG
CCGCTCCTGCTGTCACATCTTTGGTGAATGGCCAAACCGCGGACGTTAAG
TCCGCCTTGCAAAACATTCTTATTCAGACTGAGGATGCGAAGCCCGCTTC
GATTACCCTGGGCGACGCGAAGACCCCCATGGGTATCTCCATCTCGAACC
AACCTGGAGAAGAAGCTATTGTGTTGGTGGCCCCAGATTTGACTGTGGCT
CCGAAGGTCGGCCAGGTTGGCTGCTACACGATTGGTGATGATGTCTCCAA
GATCGCTTTGCTCATGTGCGAAGATAAGGATTCCGCCGCTACTCCTGTtc
ccgacaaggagaaggACGGCCAGGCCTTCGCGTGGGTGAAAGGCACCCTC
ACGAACGAGGGCCCCGAAGCTATCTGCCAGCTCAAGTTTGCTTCGAACGA
CCTTAAATTGGGCATGGCTGCGATAGAAACCGTCCCCAAGGAGCTTGAGA
ATCTGACACCCTTCAAGCTTGAGCCCCAGGAGAGCATTAACTACAGTTTC
CTTCTTCCGATCGACGCGAAGGAGATGGCCGCGCCCCTGGTTGGGATCCA
GGACACGCTGGGACCCTGCAAGATGATTGAAAAGGCGAAAGAGGCCTTAG
CTGCCGGGAAATTGGTGGGAGGTAACACCCTCGCGGACTCGGGGAAAGCG
GCCAGTGATGCGTTGGCGAAAGGGAGTGATGTGGCCAAGAAGGCCGCTGA
CAACGCCAACGCCGCGGCTGAGGAAGCACTAAAAGCCGCTAAGAACTCTC
AGGTTGCAACGGACACGGAGAATCCCGACTAtggcgatgatgatgatggc
gacGAGTCTACGGGGTCCTCGACAGAAATGACTGCCAAAGATCAGCTGGC
GCAGTCAGCGGATGATTCCgccgatgatgatgatggcgacGAGTCTACGG
GGTCCTCGACAGAAATGACTGCCAAAGATCAGTTGGCGCAGTCAGCGGAT
GATTCCGCCGACGACGATGGCACCTCAGGTGATGACGGGTCGCCGACCGA
GCTGACGGCCAAGTCTGCAATCAAAGGTATCAAAGATGCCTTGACCGGCG
CCGCTGATGCCACCGTGAAGGCGGCTCAGGAAGCTACAGCGGCAACTCAG
GCGGCCGCTGGAGGGGCCGTGGATTCCGCCCAGGGCGCAGCTGGGGCCGC
CGCAGACGCCGCTCAAGGTGCGGTGGACAGCGCCACGGGCGGGGCTCAGG
CTGCCGCGGATTCCGTCTCTGGGGACGTCTTGGCGGACGATGACAACGCG
GAGGCCGCGACGGCCGGAGATAcggcggacgaggccaaGTCCGCGGTGGA
GAAAGCCGCTGGGAAGGTGAAAGACGCCGCCGCCAACGTGCCCAAGGCGG
CCAATGCCCTGGACATGAACGGTGATGGCGCGGACGACGAAGCGACCTCT
CCCGCGCCCAAGGTGGGGGCGTCCCTCGTCGGGCTTTTCACCGTGGCCGT
CGTGGTTGCTGCCCAGTTCCTCCTCTAAATGCGTCGCGCTGGTCTTGTCG
CTGCTCTCACTTACGCCGCCTTTGCTGCAGCGGAGGATGCCGCTCCTGCT
GTCACATCTTTGGTGAATGGCCAAACCGCGGACGTTAAGTCCGCCTTGCA
AAACATTCTTATTCAGACTGAGGATGCGAAGCCCGCTTCGATTACCCTGG
GCGACGCGAAGACCCCCATGGGTATCTCCATCTCGAACCAACCTGGAGAA
GAAGCTATTGTGTTGGTGGCCCCAGATTTGACTGTGGCTCCGAAGGTCGG
CCAGGTTGGCTGCTACACGATTGGTGATGATGTCTCCAAGATCGCTTTGC
TCATGTGCGAAGATAAGGATTCCGCCGCTACTCCTGTtcccgacaaggag
aaggACGGCCAGGCCTTCGCGTGGGTGAAAGGCACCCTCACGAACGAGGG
CCCCGAAGCTATCTGCCAGCTCAAGTTTGCTTCGAACGACCTTAAATTGG
GCATGGCTGCGATAGAAACCGTCCCCAAGGAGCTTGAGAATCTGACACCC
TTCAAGCTTGAGCCCCAGGAGAGCATTAACTACAGTTTCCTTCTTCCGAT
CGACGCGAAGGAGATGGCCGCGCCCCTGGTTGGGATCCAGGACACGCTGG
GACCCTGCAAGATGATTGAAAAGGCGAAAGAGGCCTTAGCTGCCGGGAAA
TTGGTGGGAGGTAACACCCTCGCGGACTCGGGGAAAGCGGCCAGTGATGC
GTTGGCGAAAGGGAGTGATGTGGCCAAGAAGGCCGCTGACAACGCCAACG
CCGCGGCTGAGGAAGCACTAAAAGCCGCTAAGAACTCTCAGGTTGCAACG
GACACGGAGAATCCCGACTAtggcgatgatgatgatggcgacGAGTCTAC
GGGGTCCTCGACAGAAATGACTGCCAAAGATCAGCTGGCGCAGTCAGCGG
ATGATTCCgccgatgatgatgatggcgacGAGTCTACGGGGTCCTCGACA
GAAATGACTGCCAAAGATCAGTTGGCGCAGTCAGCGGATGATTCCGCCGA
CGACGATGGCACCTCAGGTGATGACGGGTCGCCGACCGAGCTGACGGCCA
AGTCTGCAATCAAAGGTATCAAAGATGCCTTGACCGGCGCCGCTGATGCC
ACCGTGAAGGCGGCTCAGGAAGCTACAGCGGCAACTCAGGCGGCCGCTGG
AGGGGCCGTGGATTCCGCCCAGGGCGCAGCTGGGGCCGCCGCAGACGCCG
CTCAAGGTGCGGTGGACAGCGCCACGGGCGGGGCTCAGGCTGCCGCGGAT
TCCGTCTCTGGGGACGTCTTGGCGGACGATGACAACGCGGAGGCCGCGAC
GGCCGGAGATAcggcggacgaggccaaGTCCGCGGTGGAGAAAGCCGCTG
GGAAGGTGAAAGACGCCGCCGCCAACGTGCCCAAGGCGGCCAATGCCCTG
GACATGAACGGTGATGGCGCGGACGACGAAGCGACCTCTCCCGCGCCCAA
GGTGGGGGCGTCCCTCGTCGGGCTTTTCACCGTGGCCGTCGTGGTTGCTG
CCCAGTTCCTCCTCTAA back to top
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