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Properties
| Property Name | Value |
|---|
| Product | e3 ufm1-protein ligase 1 |
| Orig transcript id | gnl|cribi|Naga_100199g7.9707.mrna |
| Orig protein id | gnl|cribi|Naga_100199g7.9707 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:269716..273108 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1841 ID=rna1841|Name=rna1841|organism=Nannochloropsis gaditana|type=mRNA|length=1609bp
AGAGACAAGCCTGAAGCCAACCTCAACAAGCACCCCCCTGGGCCATGCAA
GGATGGTAATGGACCGAGACGGACACGCGTGCTTACACGTACGCTTCTAA
TCATGGACAGGGCTACAGGATAGCGAGCATGGGTTCTGTTCCTGCAATCA
ATCTGATCGCGTGGACGTGATTAGCCAGAGAGGATCTCTCTGCGGAAGGC
AGATTTTTAGGAGTATGGGGGCGCACCAGGGATCTCCCTCCCTCTCCGCG
TCTACAATACCAGACGCGCCCTCACTTCCGTTCGGATCGCACGTCTTGGG
CTTGCTCCTATGCTTTGCCATTCTCTACGTCGCCTTACGCATCCTCTTCA
CCCTGGTGCATTCCCTCTTCCTCCGATCCAATCCCGCCATGCCTGGCGCA
CCGACCGTTCCTCGCCTGAGCGGGGGCTGGCGAAGCTGGTACTTGGCGGG
TGCATGCGGGGCAAAAGCGAGCCCGCTGTCCTCCACTGCCGGGCATCCGG
TCCCGTACTCCTCAAGCCCGACGGATGTGGAAAGACAACCCAATCAAGTG
CACCTCCCTTGCTCCCATTGGGCCGAAACCGGGGGCCGCCAGTACATGGA
GGACCGGCTCAGCTTCCGAGGCCGCTTGGGCGGCAGGGAGGATGCGAGCT
TGTACGCTTGTTTCGATGGCCACGGGGGGGCACTTGCCAGTGAATTCTGC
GCCCAGGAATTACCGGGCTACCTGGTGGAAAGCGAAAAAAATTGGGAAAT
GGCAACGAAATCAGCCTTAAAAGATGCGTTCGCACAAACCGATGCCGCTT
TCGCGCAGGCTCTGGCAGGAACGGATCGATTGGATGGAACAACCGCGCTG
GTCTCTGTCGTGGTAGGCGACAAGCTCTTTGTGGCCAACGCAGGCGACTC
CCGGGCCATACTCGTCCAGCGCGGCGCACGGGTGGTGCCATTGTCCCGAG
ACCACAAGCCGTCCTTGCCGGACGAGCTGGAGCGGATTACGGGGCTGGGA
GGGAAGGTGATCTTTTGGGGTCGATGGCGGGTGGAGGGAGTCCTGGCTGT
CTCCAGGGCGATAGGGGACGCGCATTTGAAGCCGTACGTGACGCCGGAGC
CGGAGGTAACGGAGTGGGAGATCACTGAGAAGGACCACTTCCTAGTCGTG
GCGAGCGATGGTTTATGGGATGTGCTCTCCAACGAGATGGCGGCGCAAAT
CGTCACCAACCACGGACAAAACCTCGAGCAGGCAGCGAAAAGGCTCTGCC
GTGAGGCCTCTATGAACGGGTCGATGGATAATATCAGTGCGATTGTGGTA
GACCTGCGGGAGGTTCGGAGAAGACGCAGGGACAGGGAAAGGTAGGCGGG
CCGTGCAGTCACGAAGGGGGAAGCTACATGTCGGTCGAGGAGGACGATAG
GTAGAGGGCCGTGTGTAAAGCTGTGTACAGGCTGAGTAGAGGAGAGGTCA
AGACTGAATGACGACGAAAGGGGAGGATGGGGAGGAAAGGGAGGTGGTTT
GGAGGAGAATTTTGATTTATGCTATCTCTGCTTCCCAGGACAGAGACCAC
GGGGTCGTGTGCTCTTGAACCTGAAAGAACAAATTGTGCCCATGGGCTGA
GGATGCTCC back to topprotein sequence of rna1841 >rna1841-protein ID=rna1841-protein|Name=rna1841|organism=Nannochloropsis gaditana|type=polypeptide|length=786bp
MDEILALQRELVAVQAEDTSHCLSERNCVEIVVKLCKLGRLDVIYTSDGK
EILTPEQLLLELQDELLSAGGRLALADIQPLLNVDMVHIQRAAARIVEED
LEGGCLLSGGELIAAWYLDDLVSEVLTQMLPEAGGRLAISTLAARVFKLP
VPLTEAAIKARVAGDVGAVPKEPGISQACLPAKLRNGALCTAEYDERQKA
RIRGVLAGVSQPITLGDLAGRYSVEESLIEDVWPALVREGVVVGALNGRQ
YVPAVFRRMQRACMEGFFGQNGYMECSRAHKLQVRRPLEYLRQSFPGAIQ
VGKELVVDAAIVRALEGHMEDCVARRSWLEAPSVLPPILSSRAAPARTSG
AALLLNECLSHGRGADLPVVVIEDIFVVSRGFLQDAQREAEARLCVSEVG
PPCQEEIALRAFKTGGEAVGTEDARIRTGTGGESNGREGGREGGREAGEN
ATSSAPGAPARVRTSEDAAILFSEEVVEAWLRAWDPALGAFPSLAGALAA
RVYHDLAPTPVAETARGDEGPGSAPVWGVSSLLAGSGVHGSAGAASGPPQ
HRVEKVLDEAILTLQLLAKGLVATPFACEKDAKEVTRYILKSRGAQLAHL
LSTWASAVYEVPYQALASLPPSFPASSSPPPSPSWDFPSITLEQCNVLKT
RLPSPLGDSLAALWTLVVKETQDEKKRKSAIAQTTPGPHPSTPGAHSKGS
GTASAPLVLEQVSDLYLSEIAPALDLIPRTLDKKKKKRCCRRGSWNWYRN
CTRASPQLRCWRWVCNCCCWEGGREGGREEGEASCS back to topmRNA from alignment at CM002458.1:269716..273108- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1841 ID=rna1841|Name=rna1841|organism=Nannochloropsis gaditana|type=mRNA|length=3393bp|location=Sequence derived from alignment at CM002458.1:269716..273108- (Nannochloropsis gaditana)
ACGGAAGCAGTCCATCACGCCTCCCTCAGCAACTTAAACTGCGACACCTT
GCTTTTTGCGAAGCTTGAGGGAAGCACTCCATCACGCCCCCCTCAGCAAC
TTAAACGTGCACACCTTGCTATTTATGAAGCTTGAGGGAAGCATTCTATC
ACGCTTCGCTCATCAACTCAATCCTAAACACCTTTTACCATGCTTTAGGG
AAGCACTCGATTACGCCTCCCTCGTCAACGCCTTGTAAGCGACCTTGCTT
TGTGAGAACCTCGAGGCTTAGCATGGAGAAGGGATGGGACGTCGATATTG
TCATCACCCTTTACTCTGAAATGAGCCTTAGAAGTAATACTTTCCCTACT
CCCAGTCCTTGCCGGCATGCCTACGGATCGGAGTAAAGCTGCCTCGACAG
ACCGTCATGATTGGTACGCCCAAGCACGTTACCCTTGTTGACACCTTTCC
AACCAAGCATTGGGCGCATACATTGCTGCGTTGAGTTCATCCGTCAAAGC
CGGAACCTTGCCAATGGATGAAATTTTGGCCCTTCAACGCGAGCTTGTGG
CGGTGCAAGCAGAAGACACCTCACATTGCCTGAGCGAAAGAAACTGCGTT
GAAATCGTCGTGAAGCTGTGTAAATTGGGTAGGCTCGACGTCATCTACAC
TTCCGACGGCAAAGAAATTCTTACCCCCGAGCAACTTCTTTTGGAGCTCC
AGGATGAGTTGTTGTCTGCGGGGGGCCGACTTGCCCTCGCTGACATCCAG
CCTCTGTTGAACGTGGACATGGTTCACATTCAAAGGGCCGCCGCGCGCAT
TGTGGAGGAGGATCTGGAGGGCGGCTGCCTGCTTTCGGGTGGGGAGTTGA
TAGCCGCCTGGTACCTTGACGATCTGGTCTCAGAGGTCCTTACCCAAATG
CTTCCTGAGGCGGGCGGTAGACTCGCCATTTCCACTCTTGCGGCACGTGT
CTTCAAGCTCCCCGTACCTCTTACCGAAGCTGCAATCAAGGCGCGGGTTG
CGGGTGATGTGGGGGCTGTGCCCAAGGAACCGGGTATTTCACAGGCGTGT
CTGCCGGCGAAACTTCGGAACGGTGCCTTGTGTACAGCGGAATACGACGA
GCGACAGAAAGCCCGCATCCGCGGTGTATTGGCGGGAGTCTCGCAGCCTA
TCACTTTGGGAGACCTGGCGGGGCGTTACAGCGTGGAGGAAAGCTTGATA
GAGGACGTGTGGCCGGCGTTGGTTCGGGAGGGGGTGGTTGTCGGGGCCCT
GAATGGTCGGCAGTACGTCCCTGCGGTGTTCAGGCGCATGCAACGTGCCT
GTATGGAGGGTTTCTTTGGACAGAATGGGTACATGGAATGCAGTCGGGCG
CACAAACTTCAAGTGCGGCGGCCGTTGGAGTACCTGCGGCAATCCTTTCC
GGGCGCGATCCAGGTGGGGAAGGAGCTGGTTGTGGATGCCGCCATAGTCA
GAGCCCTGGAAGGGCACATGGAAGACTGCGTTGCCCGCCGCTCCTGGTTG
GAGGCTCCGAGCGTTCTTCCCCCCATCCTCTCTTCTCGTGCCGCCCCTGC
CAGGACCTCGGGGGCAGCGCTGTTGCTGAATGAGTGCCTCTCCCACGGCC
GGGGGGCGGACCTTCCGGTGGTCGTGATCGAGGACATCTTTGTCGTGAGT
CGGGGCTTCCTGCAGGACGCGCAACGGGAGGCGGAGGCCAGACTTTGTGT
GTCCGAAGTGGGCCCACCTTGCCAAGAGGAGATTGCTTTGAGGGCGTTTA
AGACGGGGGGAGAGGCGGTGGGGACAGAAGACGCTCGGATCCGCACGGGG
ACGGGTGGTGAATCCAATGGGAGGGAGGGAGGGCGGGAGGGAGGGAGGGA
AGCAGGCGAGAATGCCACGAGCAGTGCCCCAGGGGCTCCGGCAAGGGTCA
GAACAAGTGAGGATGCTGCTATTCTGTTCTCCGAAGAGGTCGTCGAGGCC
TGGCTCCGCGCATGGGACCCTGCGTTGGGTGCTTTCCCCTCCCTTGCCGG
TGCCCTTGCCGCCCGCGTATACCACGACTTGGCGCCGACGCCAGTCGCAG
AGACCGCTCGAGGGGATGAGGGTCCCGGTTCGGCCCCGGTGTGGGGCGTC
AGCTCCCTGCTTGCGGGATCTGGCGTCCATGGAAGCGCGGGGGCGGCATC
GGGGCCGCCTCAACACCGAGTGGAAAAGGTGTTGGACGAGGCCATTTTGA
CCCTGCAGCTCCTGGCCAAGGGGTTGGTGGCGACCCCGTTTGCGTGCGAA
AAGGACGCCAAGGAGGTGACTCGGTACATCCTCAAGTCGCGTGGAGCTCA
GCTTGCGCACCTCCTCTCCACATGGGCCAGTGCGGTGTACGAGGTTCCCT
ACCAGGCCCTGGCTTCTCTCCCGCCCTCCTTCCCGGCCTCCTCCTCCCCC
CCGCCTTCACCGTCCTGGGACTTCCCCTCCATCACGCTCGAGCAATGTAA
CGTGCTCAAGACGCGCCTTCCGTCCCCCCTCGGCGACTCGCTGGCCGCCC
TGTGGACCCTGGTGGTCAAGGAGACTCAGGACGAGAAGAAGAGAAAGTCT
GCCATCGCCCAGACGACCCCGGGCCCCCACCCTTCTACGCCCGGGGCTCA
TTCCAAGGGCAGCGGGACTGCTTCCGCCCCCTTGGTTTTGGAGCAAGTCA
GTGACTTGTACCTTTCGGAGATCGCCCCAGCGCTGGACTTAATCCCCCGT
ACATTGGACAAAAAAAAGAAAAAAAGATGTTGCAGGCGCGGAAGCTGGAA
TTGGTATCGGAACTGCACCAGAGCGAGTCCCCAGCTGAGATGCTGGCGGT
GGGTCTGCAATTGTTGCTGTTGGGAGGGAGGGAGGGAGGGAGGACGGGAG
GAGGGGGAGGCGTCTTGTTCGTGACGCGTTCAGAGGCGGAGGGTGCGCTC
GTGGGAGGCCTATTGCCCCGCGGGCTGGAGATCCTATCCAATGCCCTGCT
GACAAGGAGAGAGGGAGGGAAGGCGAGCCGTAAGACGGAGGTTGGGTGGA
AGGAGGTGGAGGGTCTGGGGAGAGCATGGAGAGAGTACGCAGCTCTCAAG
GGAGACGGGCCGACGGGGCAAAATCTGGCAGTGGAGCTGCTGGAGGCACA
GAGGCGGGTGAAGGAGGCGTTTGGACGGAGTACGGGGAGGGAGGCAGGGG
GTAAAAGGGAAGGGAGAAAGGTTTGATTCGAGAAAGATCTCAACGGTGAT
TGATGAGACCGAGTGCGGGCCGGCGTCAGGGGAAGAGACTATGTGATGTG
CAACTGTATATATCGCTGTGCTCTGCGGCGCCTTTTTGATAAAATAGGCG
AGCATCCCGCGACACCGCCTTGAAAGAAAAGTCGGCATTGCGACATTCGC
TCACAGGGCTCCGGAGATATCTCGTCTCGGCGAACGTCTGACG back to topCoding sequence (CDS) from alignment at CM002458.1:269716..273108- >rna1841 ID=rna1841|Name=rna1841|organism=Nannochloropsis gaditana|type=CDS|length=2361bp|location=Sequence derived from alignment at CM002458.1:269716..273108- (Nannochloropsis gaditana)
ATGGATGAAATTTTGGCCCTTCAACGCGAGCTTGTGGCGGTGCAAGCAGA
AGACACCTCACATTGCCTGAGCGAAAGAAACTGCGTTGAAATCGTCGTGA
AGCTGTGTAAATTGGGTAGGCTCGACGTCATCTACACTTCCGACGGCAAA
GAAATTCTTACCCCCGAGCAACTTCTTTTGGAGCTCCAGGATGAGTTGTT
GTCTGCGGGGGGCCGACTTGCCCTCGCTGACATCCAGCCTCTGTTGAACG
TGGACATGGTTCACATTCAAAGGGCCGCCGCGCGCATTGTGGAGGAGGAT
CTGGAGGGCGGCTGCCTGCTTTCGGGTGGGGAGTTGATAGCCGCCTGGTA
CCTTGACGATCTGGTCTCAGAGGTCCTTACCCAAATGCTTCCTGAGGCGG
GCGGTAGACTCGCCATTTCCACTCTTGCGGCACGTGTCTTCAAGCTCCCC
GTACCTCTTACCGAAGCTGCAATCAAGGCGCGGGTTGCGGGTGATGTGGG
GGCTGTGCCCAAGGAACCGGGTATTTCACAGGCGTGTCTGCCGGCGAAAC
TTCGGAACGGTGCCTTGTGTACAGCGGAATACGACGAGCGACAGAAAGCC
CGCATCCGCGGTGTATTGGCGGGAGTCTCGCAGCCTATCACTTTGGGAGA
CCTGGCGGGGCGTTACAGCGTGGAGGAAAGCTTGATAGAGGACGTGTGGC
CGGCGTTGGTTCGGGAGGGGGTGGTTGTCGGGGCCCTGAATGGTCGGCAG
TACGTCCCTGCGGTGTTCAGGCGCATGCAACGTGCCTGTATGGAGGGTTT
CTTTGGACAGAATGGGTACATGGAATGCAGTCGGGCGCACAAACTTCAAG
TGCGGCGGCCGTTGGAGTACCTGCGGCAATCCTTTCCGGGCGCGATCCAG
GTGGGGAAGGAGCTGGTTGTGGATGCCGCCATAGTCAGAGCCCTGGAAGG
GCACATGGAAGACTGCGTTGCCCGCCGCTCCTGGTTGGAGGCTCCGAGCG
TTCTTCCCCCCATCCTCTCTTCTCGTGCCGCCCCTGCCAGGACCTCGGGG
GCAGCGCTGTTGCTGAATGAGTGCCTCTCCCACGGCCGGGGGGCGGACCT
TCCGGTGGTCGTGATCGAGGACATCTTTGTCGTGAGTCGGGGCTTCCTGC
AGGACGCGCAACGGGAGGCGGAGGCCAGACTTTGTGTGTCCGAAGTGGGC
CCACCTTGCCAAGAGGAGATTGCTTTGAGGGCGTTTAAGACGGGGGGAGA
GGCGGTGGGGACAGAAGACGCTCGGATCCGCACGGGGACGGGTGGTGAAT
CCAATGGGAGGGAGGGAGGGCGGGAGGGAGGGAGGGAAGCAGGCGAGAAT
GCCACGAGCAGTGCCCCAGGGGCTCCGGCAAGGGTCAGAACAAGTGAGGA
TGCTGCTATTCTGTTCTCCGAAGAGGTCGTCGAGGCCTGGCTCCGCGCAT
GGGACCCTGCGTTGGGTGCTTTCCCCTCCCTTGCCGGTGCCCTTGCCGCC
CGCGTATACCACGACTTGGCGCCGACGCCAGTCGCAGAGACCGCTCGAGG
GGATGAGGGTCCCGGTTCGGCCCCGGTGTGGGGCGTCAGCTCCCTGCTTG
CGGGATCTGGCGTCCATGGAAGCGCGGGGGCGGCATCGGGGCCGCCTCAA
CACCGAGTGGAAAAGGTGTTGGACGAGGCCATTTTGACCCTGCAGCTCCT
GGCCAAGGGGTTGGTGGCGACCCCGTTTGCGTGCGAAAAGGACGCCAAGG
AGGTGACTCGGTACATCCTCAAGTCGCGTGGAGCTCAGCTTGCGCACCTC
CTCTCCACATGGGCCAGTGCGGTGTACGAGGTTCCCTACCAGGCCCTGGC
TTCTCTCCCGCCCTCCTTCCCGGCCTCCTCCTCCCCCCCGCCTTCACCGT
CCTGGGACTTCCCCTCCATCACGCTCGAGCAATGTAACGTGCTCAAGACG
CGCCTTCCGTCCCCCCTCGGCGACTCGCTGGCCGCCCTGTGGACCCTGGT
GGTCAAGGAGACTCAGGACGAGAAGAAGAGAAAGTCTGCCATCGCCCAGA
CGACCCCGGGCCCCCACCCTTCTACGCCCGGGGCTCATTCCAAGGGCAGC
GGGACTGCTTCCGCCCCCTTGGTTTTGGAGCAAGTCAGTGACTTGTACCT
TTCGGAGATCGCCCCAGCGCTGGACTTAATCCCCCGTACATTGGACAAAA
AAAAGAAAAAAAGATGTTGCAGGCGCGGAAGCTGGAATTGGTATCGGAAC
TGCACCAGAGCGAGTCCCCAGCTGAGATGCTGGCGGTGGGTCTGCAATTG
TTGCTGTTGGGAGGGAGGGAGGGAGGGAGGACGGGAGGAGGGGGAGGCGT
CTTGTTCGTGA back to top
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