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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100402g2.3862.mrna |
| Orig protein id | gnl|cribi|Naga_100402g2.3862 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:258329..260398 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1834 ID=rna1834|Name=rna1834|organism=Nannochloropsis gaditana|type=mRNA|length=4102bp
CGGGGGTCGGTGTGCATGGTTTTCACTGGTGGTGGCAAGGTGGTGGCGTC
TCGGCGTTCGAAGAGTACATGATCGAGAAAACAATTTCAGGCTGCCCGCC
TCCCGCCGTATTGGCCCTGGCAACCACGGTAATGAGAGCCTTGGGTGTAC
CTTTCTTCACGTGTACCGTGCACGAAGCCCTAGTCTCGTGTGCAGCGTAC
TATGTGTGGTTGCGCCTGCCGGGAGTTTCAAGATTTCGGGCGGGCGTCAC
ATTCCTAAGTATGCACGTTGCTTCATCCGAAGGGCAAAGTGACACAGAGA
GTCACGCCTGAACTTGTCCATGGCATGTCCCCCGCGTGCACTCAGTTCAG
CCCGACATCATTTCATCATGACATGTACAGACACGTCTGAGCTCTGACTT
GTGAGCGGGATAACGCTGTTTCGGTGGATATAGGAGCAACGCACGGGGAC
CCAAATAACTGTAGCCATAATCGGACATGCTATGACTTCTAACACTGCTA
TATCTTACCCCGGCACGAAGGAGGGGTGTGGGAAAGTGGAAATATCGAAC
GGGAGCATACCATCGTGGCTTCCCTCACCGGTTAGTGCGTGGGTTTGCTG
GCATATGATAGCGCATGAGGAGAAATATGTTTTCGGGGGGAGAACGATAT
CAGGGTCTCTTTCTTGGGTCGCTCTTCGGTGTGCTCGGCAGATAGGAAGG
GTACTACGTCTGAGTGTGTCATGTTTAATTTTTCCCGCCCCACATGGCTG
TGTTCCGGCCTTCGTTGTGGTTTCCTTACCATGTCTTTCGACTTTTTCTG
TTTCCCTTCCAACAGAATTTGGCAGCTGCCTTCGGATTGAACGACTCGCC
GAGCATGAACATGCCTTTTGCCTCCTCTCCGTACTTAGGCCTCGGCCTGG
GCCATGCAAATAACTGGAAACCGGGTGCCTCGAGTGGCCCCGTCTTACAG
CAGCTACCGCAGCCCCCCCCCCCGACGCAGGGTGCGCTCCAGCAGCAGCA
CCACGTCTCCGGCCATCCGGTCCAATACCTGCACCCCGCCCACAACGGCA
GCAACAAGGAGGTGCCCAAGCTGGTTCTCGGCATGGTGCACAGCCCGTCT
GCTTTTCTGCAGAGCACGTTGCCACTCGAGGCCGGGACGGAGGGAGAGAG
CGTGGGGCAGGCACTGGGCCACGCCGGACGGACACGGCAGTCGCAGCCGC
AGCATCCGCACTGCCGCCAGGAACAACAGCAGCAACAAATACAGCAACCA
CCCCCACCCCCCTTGCCTCCACCAAACGAGCAAAGGATGCTTTCCCGCTC
CACACCTGCACCCCTGCCACTGCATGGCAGCACATTATTGCCCCCCCCCT
TGAACACCCCGCTCATGGCGGAGTGCCCCCCGCTGCGCCCAGATCAGCAA
AGCCTCGGTGCGGCTTACGCCTCGATGCCTCCCCCCGTAACAGTCTTAAA
GCCGGCGACACCGGCAGTGGAAGCTGCGGGGACGGGGACCGGGGTCGAGC
TCCCTGCGGTCTCTGACCAGAGCCCGGAGGAGGTGCTCTTGAACCTCCGA
TATTCCGCCCTACCCGCCTCCAAAACGGACGCCGGACCGAAAGGAGAGGG
CGAGAAAGGCGGCCAAGCGGGGCTAGGGAAAGAAGAGGACAATGCTCGAG
CCATGGACGAGGTCAAGGAAACGGCGCCGACAAAGGCCGGCAACGGCCAC
GTTAACGGCCACGGCAACGGCCACGGCAGCGGCAAAACCACCAAGGGCGC
CCCCGGAAGTGGGAAGACGAGCAGCGGAGACTGCTCTTCGTCACCCGAGG
AATGCCTTCTATACCTGGCGCAATCCCCTGCCCCCGCTCCCAACGCGTCG
TCGCAGATGCCTCCCCCTCCAGCTAAGGAGCCCACCTCCCGCTTTCCTCC
CGCCGGACCTCCGGTCTCCGGCACCCTGCGTCCTCCTGTGTCGCTCAAGA
ATGCTTCGGGCTCGATACCCAAGGCGCGACAAACACACAGTGCCCTTCTG
CGCCTGATCCGTGCGGAGAAACCTATGCAGGAGATGAGGCAAGGGGAGAC
AGACAAGGGGTCGGGATATCGCGAGCCTACGGAAACCAGCCCGTGCGCAG
GGAGCCAGGTGCTGATGCCGTCGAATAACAGCGATAATGGCACCTTTGGA
AGCAAAGAGGAGGCTCCCAAGGGCTCAGGCGGGGGACTTCCGGGCAATTC
CCAGGTTGGAACGGGGGAGGGTGGGGTCCGCGCGCCGTCGGCCTCTCCCT
ACCTCCCGAGCCCGGGGTCTAGTCCGTTTTGGCCGCATGCCGCTCACCTC
TCCAACCAGTCTCCCTCCTTCTCCGGGGCCCACGCCCTCTCGAGCCACCC
TTCTCATCCCTTCACGGCGGCGCAGCGGCCGCAGCTTCCAGGCCAGCCGA
TGGGCCCGCCTGCCTCGGGCGTCCCCTCTGTGTATGCCCCAGCCCTGCCC
CACCCACAACAGCCTCAGCAACTCGAGGACTATCGTCTTCAGTATTTGCA
GCAGCAGCAACAGCAACAGCGGAACCACTTAAAACAGCAACAGCCCCCGC
TCCCCCCTAATCCGCCGGCGCAGGACCCGCGTGCGCCCTACTACTCCATG
GCCCATGATAGTTCCCAGCATTCCTTCTCCCCCTTTCCCCTCCCGGCCTT
CTCGCCCTCCCCTCCCTTCCCCGGTGCGGCCGTAGGAAGCGTTCCTTCGA
GCCCTTTTGACATGATGACGTGGTCCCCCTCCCCAGCACTCTCTTGCCGC
CAGCTGCCCCCTCCACCTTCGGCGGCCGCGGCTGTCGCCTCGCAGGGCCT
TCCCCCCCTCCCGTCCACAGCGCATATTCCGGTGCAATACTACGACAACG
GCCAGCCCGGGCCCACGGGCAGGGTAGAGAACGGAGGGAGCGGGGAAATG
CAGGGGACGAACAGCAGCCACGGGTGGAGTCAGGGAGGGGCGAAAGTGAA
AATGTCCGGTGCCAACCCCTATGCCCTGTCCTCCTCCTCCTCCTCCTCTT
CTTCCTCCTCCCCGCCTTCCTCATCCTCATCCCCTTCCTCCCTCCGTCCC
AGCTTGGATACAAATCGGGCTCGGGGCTCTGTGAGAATGCCGGCACATCG
GGGGGGGCGCCGTGGGGTGAGAGGTAGGGGTGGAGACCAACGGTCGGGCA
GGGACGGGAAGAGTAACATGCCCCACCGCCTGCGGGAATTGGAGGCGGAA
GTGAGCAATGAGACGGGGTCCGTGCGTCGGGAGCGTTTGGTGTGCGAGAC
TTTGGCCCAGCTTTTGCGCGCGAAGGAGACCAACGAGGACTCAGAGGAAG
GGGCCATGGTCCTGGAGTTGCAGAAGCAAAACGCGGCCATTCAGGCTTTG
ATATACAAAGTGCAAGCCATGAAGATTGGCTGCCGAGAAGCTGCGAAAAA
TGGGAGGGATCCCGCTGCGGTGTTGAAAATCACCGACGAAGTTTTGTCCA
CACTCAATTTGCCACCGCCTACCCTCCCCCCCAATGTGGTGCGTATCCCG
TCGGTCGAGGGGAACAGGCGGGCTTGAAATGGAAACGGAAGGCGGGGGAG
GGAGCACAGTCACATGCCTCATACTGTTATGGCCCAAGAGGACTCTAGAC
GGGAGGATGGTATCTGCTCTGGCAGGGTGTCTATGATGTGGGATGTGAAT
ACATGGCTGCGGAAGGCAAAGCTATACAAATTTTGATTATGCGAGAGCTC
GGAATCTCCGGCGGGTATCGCACCAAATGTGGCATGTATGATATGTGCCC
GCATTCTATTTTCCTCGGAAGGGGAGGACTAGACACGTGTGTGGCCCTTG
AGCAAATTTGTATCATCTGATTGAAATGTAGGAAGAGTTATCAAGAAGGA
TCTTAGCTTGAACTCATTAAGGTAATGGGGTCAAAGTATGGCTTCGATGC
ATGGTCAAAGGCATAAAAATCTGGTGCATTCGATTCTTTTACCAATCCCC
CCGTTTTTACCCTCCTTGCACGTATGATTTTTATTTTCTTTCCATCTCGA
ATTTCTCCTTTACGCACTCTTGTTTCCAATCACATGGCAATGTGCTTGAC
CATGGGCTCTACATGTTGGCTCCCTCAGATTTTCCATCGAAAGCGAATGT
GC back to topprotein sequence of rna1834 >rna1834-protein ID=rna1834-protein|Name=rna1834|organism=Nannochloropsis gaditana|type=polypeptide|length=519bp
MKGTGMPSKTTHMDGAAGMHHVAAKTQKRHFKEPPVVVKEIIAQSITTHA
REARKTVNSQTSKSTSSAATPKKLGAPAVSRHHPLPKASVVRTPVQQPTP
RPPHRQTPQELEEEEVDETITHLAVVPSRETRQTRVQSSGSSKETEAQGS
GCKKESLGSIAAAQNALLEGKLQRQAARQATNASSLSISESNGPGQSPWT
AKAFGRPRRRAGRKKVEAPSAAKENVILFPCPPTPEIRKGRNKGLPSRKE
AGKAGAAAGAPRPPTALALASSQATPAGKTKGREKDLTPPTSRSSCVGTV
LSPSVPSTAVKTPSIAKGTPPPHPTPSALPPAGRTRTGSTALKARKGLVK
AQPQAYAQTRTPPNTDSGSTGKTGNGRQLRQRRKDDAEQGRDTQAASPVS
RVLVPEENGKLTRAKAQENERANTLAKEREEEPNEEEHVFRERGNKTNRR
KTILKLMKTIKVAPYMPSSSEEESEKDGEEEENVSLLKEDPKAYNDWIAH
LPPAGRRTSKGLSVEDCLR back to topmRNA from alignment at CM002458.1:258329..260398- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1834 ID=rna1834|Name=rna1834|organism=Nannochloropsis gaditana|type=mRNA|length=2070bp|location=Sequence derived from alignment at CM002458.1:258329..260398- (Nannochloropsis gaditana)
GGCGGTGCACCTTCGCGAACACAATGCAAATTGTCAACACTCTTTCCTCA
ACGATACACAATGAAAGGCACAGGCATGCCGAGCAAAACCACACACATGG
ATGGCGCTGCTGGGATGCACCATGTCGCGGCCAAGACGCAAAAACGCCAC
TTTAAGGAGCCGCCAGTGGTCGTCAAAGAAATCATCGCACAAAGTATCAC
CACCCATGCCAGAGAGGCGCGTAAAACAGTAAATTCGCAGACAAGTAAGT
CCACGTCGTCGGCGGCCACGCCCAAGAAGCTTGGTGCTCCCGCTGTTTCT
CGTCACCACCCACTCCCCAAGGCCAGCGTGGTTCGGACGCCCGTCCAACA
GCCTACACCGAGACCTCCCCACCGACAGACCCCTCAAGAATTAGAGGAGG
AAGAAGTCGACGAAACGATTACCCATCTCGCAGTGGTACCTTCCCGTGAA
ACGCGTCAGACGCGCGTTCAATCGTCAGGATCTTCCAAAGAAACAGAGGC
TCAGGGCAGTGGATGCAAAAAGGAGAGCCTTGGTTCCATTGCGGCTGCAC
AAAACGCCCTACTGGAAGGTAAGTTGCAGCGTCAAGCGGCACGCCAAGCC
ACCAACGCATCTTCATTGAGTATCTCCGAATCGAACGGGCCCGGTCAGTC
TCCCTGGACGGCCAAGGCCTTCGGGAGACCCCGCCGGAGAGCGGGAAGGA
AAAAGGTGGAGGCCCCCTCAGCCGCCAAGGAGAACGTGATCCTGTTTCCC
TGCCCGCCTACGCCTGAGATCAGAAAGGGCCGGAACAAGGGTCTGCCGTC
GAGAAAGGAGGCAGGCAAGGCGGGTGCGGCCGCGGGGGCTCCCAGGCCCC
CGACCGCTCTGGCACTTGCTTCCTCACAAGCAACGCCAGCCGGCAAGACT
AAAGGGCGTGAAAAGGATCTGACGCCGCCAACGAGCCGATCGTCCTGTGT
TGGGACTGTCCTGTCGCCCAGCGTTCCATCCACCGCGGTGAAGACCCCGT
CCATAGCCAAAGGAACACCTCCCCCCCACCCTACCCCAAGCGCTCTTCCT
CCGGCGGGCAGGACGCGGACGGGCTCGACGGCCCTCAAGGCCAGAAAAGG
CCTGGTTAAGGCGCAACCTCAGGCGTACGCCCAGACGAGGACTCCTCCAA
ACACGGATAGCGGCAGCACTGGCAAAACCGGCAACGGGAGACAACTTCGC
CAACGCCGAAAGGACGATGCCGAGCAAGGCCGTGATACACAGGCGGCCTC
CCCCGTATCGAGAGTGCTTGTGCCTGAGGAAAACGGAAAATTGACGCGTG
CGAAGGCGCAGGAGAATGAGCGTGCAAACACACTAGCGAAGGAGAGGGAG
GAAGAGCCAAATGAAGAAGAGCATGTCTTTCGAGAACGGGGAAACAAAAC
CAATCGGCGCAAGACCATTTTAAAGCTGATGAAAACGATTAAGGTGGCAC
CGTACATGCCATCTTCTTCCGAAGAAGAGTCGGAGAAAGACGGAGAGGAA
GAAGAGAATGTGTCGCTCTTAAAGGAGGATCCCAAGGCCTATAACGATTG
GATTGCCCATCTTCCCCCCGCGGGGCGGCGGACTTCCAAGGGACTCTCGG
TGGAAGACTGCTTGCGGTAGCTTAGCTTTGGAGGTGGAAGAGAAGAAGGG
AAATGCATTGATCGCTGCTAGTATAAAGGAGGACAGGATATTCTATGTTT
GTGTCCAAATTAGCGATTAATCAAGGGGTTGGTATCGTCCCGGCGACCAC
GACTGGAGGCGATCGGCTCTTCATGGAGTGCGAGGCGAGAGAGGAAGGTG
GGACTAGCGTGCGAAGCGATTTAAAAGCAAACGCCTAGAATCCTTCCCGG
CACAGCATTCTCTGTACGCCTGCCCTAGGGCACATTCGCTTTCGATGGAA
AATCTGAGGGAGCCAACATGTAGAGCCCATGGTCAAGCACATTGCCATGT
GATTGGAAACAAGAGTGCGTAAAGGAGAAATTCGAGATGGAAAGAAAATA
AAAATCATACGTGCAAGGAGGGTAAAAACGGGGGGATTGGTAAAAGAATC
GAATGCACCAGATTTTTATG back to topCoding sequence (CDS) from alignment at CM002458.1:258329..260398- >rna1834 ID=rna1834|Name=rna1834|organism=Nannochloropsis gaditana|type=CDS|length=1560bp|location=Sequence derived from alignment at CM002458.1:258329..260398- (Nannochloropsis gaditana)
ATGAAAGGCACAGGCATGCCGAGCAAAACCACACACATGGATGGCGCTGC
TGGGATGCACCATGTCGCGGCCAAGACGCAAAAACGCCACTTTAAGGAGC
CGCCAGTGGTCGTCAAAGAAATCATCGCACAAAGTATCACCACCCATGCC
AGAGAGGCGCGTAAAACAGTAAATTCGCAGACAAGTAAGTCCACGTCGTC
GGCGGCCACGCCCAAGAAGCTTGGTGCTCCCGCTGTTTCTCGTCACCACC
CACTCCCCAAGGCCAGCGTGGTTCGGACGCCCGTCCAACAGCCTACACCG
AGACCTCCCCACCGACAGACCCCTCAAGAATTAGAGGAGGAAGAAGTCGA
CGAAACGATTACCCATCTCGCAGTGGTACCTTCCCGTGAAACGCGTCAGA
CGCGCGTTCAATCGTCAGGATCTTCCAAAGAAACAGAGGCTCAGGGCAGT
GGATGCAAAAAGGAGAGCCTTGGTTCCATTGCGGCTGCACAAAACGCCCT
ACTGGAAGGTAAGTTGCAGCGTCAAGCGGCACGCCAAGCCACCAACGCAT
CTTCATTGAGTATCTCCGAATCGAACGGGCCCGGTCAGTCTCCCTGGACG
GCCAAGGCCTTCGGGAGACCCCGCCGGAGAGCGGGAAGGAAAAAGGTGGA
GGCCCCCTCAGCCGCCAAGGAGAACGTGATCCTGTTTCCCTGCCCGCCTA
CGCCTGAGATCAGAAAGGGCCGGAACAAGGGTCTGCCGTCGAGAAAGGAG
GCAGGCAAGGCGGGTGCGGCCGCGGGGGCTCCCAGGCCCCCGACCGCTCT
GGCACTTGCTTCCTCACAAGCAACGCCAGCCGGCAAGACTAAAGGGCGTG
AAAAGGATCTGACGCCGCCAACGAGCCGATCGTCCTGTGTTGGGACTGTC
CTGTCGCCCAGCGTTCCATCCACCGCGGTGAAGACCCCGTCCATAGCCAA
AGGAACACCTCCCCCCCACCCTACCCCAAGCGCTCTTCCTCCGGCGGGCA
GGACGCGGACGGGCTCGACGGCCCTCAAGGCCAGAAAAGGCCTGGTTAAG
GCGCAACCTCAGGCGTACGCCCAGACGAGGACTCCTCCAAACACGGATAG
CGGCAGCACTGGCAAAACCGGCAACGGGAGACAACTTCGCCAACGCCGAA
AGGACGATGCCGAGCAAGGCCGTGATACACAGGCGGCCTCCCCCGTATCG
AGAGTGCTTGTGCCTGAGGAAAACGGAAAATTGACGCGTGCGAAGGCGCA
GGAGAATGAGCGTGCAAACACACTAGCGAAGGAGAGGGAGGAAGAGCCAA
ATGAAGAAGAGCATGTCTTTCGAGAACGGGGAAACAAAACCAATCGGCGC
AAGACCATTTTAAAGCTGATGAAAACGATTAAGGTGGCACCGTACATGCC
ATCTTCTTCCGAAGAAGAGTCGGAGAAAGACGGAGAGGAAGAAGAGAATG
TGTCGCTCTTAAAGGAGGATCCCAAGGCCTATAACGATTGGATTGCCCAT
CTTCCCCCCGCGGGGCGGCGGACTTCCAAGGGACTCTCGGTGGAAGACTG
CTTGCGGTAG back to top
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