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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100402g7.3858.mrna |
| Orig protein id | gnl|cribi|Naga_100402g7.3858 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:249963..251176 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1829 ID=rna1829|Name=rna1829|organism=Nannochloropsis gaditana|type=mRNA|length=3097bp
CTGAACAGGACCACGAGGAGATGGATGAAGAATTACGGCTGGAGACGGCT
CGAGAACTTTTAGCCCGGGGTTGTGCAGAACTTGTTCGCCGCGACGCTCC
TCTGGAGCCAGCTTTGCAGCTTATAGAAGCGGCGCTATTCATTTCGCCGA
CGCTACGGAGCTGTGCGTGGGAACGAGGGTTTGCTCTCTACTATAAGGGA
GCTTGGGCCGCTGCTGCAGATCAATTCAGTGCTTGCTGTCAAGTCGATCC
AGACGACCTGGAGCCTTACCTGTGGAGATGCCTCGCCGATGCCAAAGGGG
AGGGCGGCTGGGAGGGGGCGAGGGCGGGCTTGCACGACGGATTCAAGGGG
CACGACAGGCGGGTGGGCATGATGAACATCTTGTCGCTTTTTTTGGAAGA
AGAGGAAGAACATGGAGTGCGAGGCAGCGACGAAGAAGGGAAGGAAAAGA
GGCTGAGAGCCGTCCAGGCGGTGCTGGAGTACGGAGAGGGAGACTGCCAT
GCTTCCCAGCGCATATCTTTCGCCTGCGCGTTGTATTTGGAGGCGCGTGG
GATGGAAGAAGAGGCCCTTGCTGTGTTGGAAGAGGTGACATCACGGAAGG
AGGACGGGGATGTCTACATGCGGGAGATGGCGCGAAATCATCTCCGGGTC
TTGGGCCGGCGGCTGGCGTCCCAAGTCCTGCCTTGTGCGAGTGCGGGGAA
AGCGACCAGAAGTCAGGAAAGGAAGAGGGTTTTTGAGACTCCACGGGTGA
TCAAAGGGGGCTGGCAGCTATCGGCGGGCCACACCATGGTTTCAGTGCAT
GCTGGAGGAGGAGGGAGCGATGGAGGGGCGGGAGGGGCCCATGGCGGGGA
AGAGGGCCGCCCGGCCCCCTTCAAGGCTTTGGAGCGCGCAGCCGCCGCAG
CTCGTGTCTTTGCCGCCCCACGCTCGCTGGCAGCACCCGAAGAGGAACCG
TCGGAAGAGGCTGCCAGGACGGAGATGGCGGCTTTGGTGGACCTAGAAGG
GCACGCCCAGGCCGGCATCACGGCCTTCGACGCGGGGGATATTTACACCG
GAGTGGAACGCCTGCTGGGGCGGTTTTGGCGCGAACACCATCCCACCTAC
ACAGCCCCCCGGCCCATCCAGATCCATACCAAGTGCGTCCCGGACCGGCA
CCTGCTCCCGACCCTGGACCGAAGCACCCTGCGTGCCTGTGTGCTTCGGA
GCCTGAACCGGCTGGAGTGTGCCTCTATTTACCTCTTGCAGTTCCACTGG
TGGGATTTTCAAGTCCCGGGGTACCTGGAAGCTGCCCGTTGCTTGGAGGA
ATTGCGCGAAGAGGGCTTGATCACGCATGTGGGTCTGACGAACTTCGACG
TGCGCCGCACCAGGGAGCTGTTGGACGCCGGCGTGGAAATCGCCAGCTCC
CAGGTCCAACTCTCATTGATCGACGACCGGGCGGTGCGTACGGGCCTGTT
GGAGCAAGCCCAGGGTGAAGGGATCGCGATACTGGCCTACGGGGTCTTGG
CAGGCGGCTTCCTGACTGACGCGTGGCTTGGCCGCCCGGAGCCCCGGAGG
AAGGAGGGGGAGGGCGGGGGGGGTCCGGGGGAAAGTGGGATGTCGAACAG
GTCACTGGTCAAGTACTTGCTCGTCATCGAGGACTGGGGTGGGTGGGCCC
GGTTCCAGTCCCTCCTCAAGCTGTGCCGGGCCATCGCTGACCGACATTCG
TCCTTCTCGTCCTCCTCTTGGTCCCCGCCGGATCCCTCCTTCCCTAGTTG
TCCTTGGGAGGGGGACGAAGGCACCCACGCTTCCACCCCTTCCTCCTTCC
CTTCCTCCTTGTCTCCTTCCGCCCCGCCCTCTCCTCCCGTCACTATCGCC
ATGGTGGCCATTCGATACGTCCTGGACCTTCCCGGCGTCTCTGCCGTCAT
CCTCGGTTCCCGCTCTCCCTCCCATATCCGTCAAGCCGTGCGAGCCGCTG
AGGGAGGTTCGGAGAGAGGGCGGGAAAGAGGCAGAATGCACCCGCCATTC
ATGCTCACAGAGCAGGACAAAGCGGAACTGGAAGCATTCTTGAGAGGCAA
TGGGCAGGCGGGGTCGGTGCGGGGGGAGGTGTACGAGCTGGAGCGAGAAA
AAGCCGGGCCCCATGCGGCTATCATGCGTTACAATTTGAACGAGGGTCTG
CGGGGCGGGGCCCATTGTGCCGAGATCCTCGACCGTTTCTTGGACGGCTT
TGCCTTCCACTTTCCCCACCACGCTCCCTCCCATCAACGTTGCCTCCCCC
GCTTCCCTCCCGTCGACCCATCCTCCCGCCTTGCCGTCACCTCCTGGGCG
ACCCGGCTGCAACTTGAACTTTCCTTACTCCAAGATCGCGATCTTTCTCC
CTCCCAGCGCGTCGACCGAAGGTTGCTCCGTGCCTCCTTGCGCTTGCTGG
TGTTGCAACAGCAAGCCCGTTCCAGGGGAGTGGCAGCGGTAGAGGTGCTG
GAACATTTGTGGGCGGCTATTGAGGGGCTGGTGGAGGGCGGGGCGGAGGG
CGGGGGGGGGGGCGGGCGGGCATGGGGGGACGAGAATGTGTGGGCCGGCA
GCCCTCCTTCCGGCTCCTTTCCTCCCTCCTCTTCCTCCTCTCCTTCCACC
TTCTCCCCCGCCTTCTCCTCGTTTGGGTCTCCCTCTTTCCCCTCCGTCTC
GCACCGGCCCCAAGCGTTTCCCGGGGCGGCCGGCGTGCGACGCTATGAGG
CGCTTTCTTCCCTCCTGCTCCGCATCCCCCAGGTCCTGCTCAAGGACGTC
ATCATGGAGTTGCGCGCGGCCGGCGCCTTGCCTTCCTTGTGGGCTCACGC
TGCGCTCCGGATGTATCGTGGTTTGGTGCAGTACTTGAGAAAACGGGAAG
GGGAGGGGTGGAGAGGGTTGAGGAGAGAGGAGGAGGAGATGGAGGGGGAA
GGAAGGGCCAGGAGGGGGCAAGTGGCCTTCTACGCAGAGACAGCGGCGTT
GGCGGTTGAGATGTATGCCAAGACGCTTCGATGCGAGTGTGACGTGGAGG
AGGAGGATGAGGAGGAGGAGGAGGAGGAAGAGGAGATGGAAGAAGAGGAG
GAAATGGGGGAGGAGGACGAGAAAGAGGAAGTGATGGATTTGGAGGA back to topprotein sequence of rna1829 >rna1829-protein ID=rna1829-protein|Name=rna1829|organism=Nannochloropsis gaditana|type=polypeptide|length=167bp
MVGEGGKLRADTSVLRDVFGREEAGGSERRGMRRDDWTGEGERRGGRREG
GRTRRKSRRVEVCLCTNTQTCTIYLGRKLATRRPLGRKVGRKGPKGEERE
EKAAAGRWAWREKACHRRQRAASLRVACGNKGDICRTGGSGQVPGEAREP
QGRHPWRRLPRGEPCPT back to topmRNA from alignment at CM002458.1:249963..251176+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1829 ID=rna1829|Name=rna1829|organism=Nannochloropsis gaditana|type=mRNA|length=1214bp|location=Sequence derived from alignment at CM002458.1:249963..251176+ (Nannochloropsis gaditana)
CGCGCCCCGGCCCACCTGCACCCAAGGTCGATGCCTCGCACGCCTTTGCC
cggctcgtcttcctccgccggcttCTCCTCAGCGCTGCTCGGTGTTTTTT
GGAGGTCCGCTTACATGAAGGGGAGTGGTCCGCGCGGCAAGTCTGCAATT
TCTTGGAATCGGAGCTGGTTCTTTCCAAGGGCGAAGCCCGCCGGGAAGTG
ATGATGTACCTCAGGCATCCCTTGACGGCAAGCGCGGGCTTAATGGGCTG
GGAAGAGTtgcgggaatggaggaggatggaggtggatgaCCGACggcaag
gaaagaggggggaagggagggcggcgaggacggagagggacaACCAGGAA
tggtgggagaaggcggcaagCTTCGGGCGGATACCTCCGTGTTACGTGAT
GTAtttggaagagaagaggcgggagggagcgaaaggaGAGGCATGAGAAG
GGACGATTggacgggcgagggagagaggagggggggaaggagggagggag
ggaggacgaggagaaagtcgaggagggtggaggtatGCCTGTGTACAAAT
ACACAAACATGTACGATCTATCTCGGAAGGAAGTTGGCCACGAGGCGCCC
GCTTGGAAGAAAAGTCGGCCGAAAAGGACcgaaaggggaggaacgggaag
agaaagcagcgGCTGGCAGgtgggcatggagggagaaagcgtgCCACAGG
CGGCAGCGTGCAGCAAGTCTACGGGTTGCATGTGGGAATAAGGGTGATAT
TTGTCGAACAGGTGGAAGTGGTCAGGTGCCAGGTGAAGCCAGAGAGCCCC
AGGGCCGGCAtccttggaggaggctgccCAGAGGTGAGCCTTGCCCTACC
TAAAATGAAGCCAGCGTCGCACGAATAGAGAGAATCGATGCCACATGCGT
GTGGAATCCCCTGTGAGGGGGAGCAATGACGGCCAAACTtgagaaaaaag
gcgcgaaagcAACGCCGCCCGGAGAGTTTCTACTTTGACTAGACAAGACG
CCCGGTTTCTTCCAAAGGAGAGGCAGCCGCAAGCAAGAAAAGCCCTGAAG
TTTTGCCTTGAGCTGTGGTCATTTAGTTGGGATTGTCCCCCGCCATTGTT
TGCCCTTTGCCTGTCAGctactccttctcccccccccaccgttGTGactc
tctcccacctcacaccctcttccccccccccccaccaacGAAAGCATGAC
GGCCATGACCGTCC back to topCoding sequence (CDS) from alignment at CM002458.1:249963..251176+ >rna1829 ID=rna1829|Name=rna1829|organism=Nannochloropsis gaditana|type=CDS|length=504bp|location=Sequence derived from alignment at CM002458.1:249963..251176+ (Nannochloropsis gaditana)
AtggtgggagaaggcggcaagCTTCGGGCGGATACCTCCGTGTTACGTGA
TGTAtttggaagagaagaggcgggagggagcgaaaggaGAGGCATGAGAA
GGGACGATTggacgggcgagggagagaggagggggggaaggagggaggga
gggaggacgaggagaaagtcgaggagggtggaggtatGCCTGTGTACAAA
TACACAAACATGTACGATCTATCTCGGAAGGAAGTTGGCCACGAGGCGCC
CGCTTGGAAGAAAAGTCGGCCGAAAAGGACcgaaaggggaggaacgggaa
gagaaagcagcgGCTGGCAGgtgggcatggagggagaaagcgtgCCACAG
GCGGCAGCGTGCAGCAAGTCTACGGGTTGCATGTGGGAATAAGGGTGATA
TTTGTCGAACAGGTGGAAGTGGTCAGGTGCCAGGTGAAGCCAGAGAGCCC
CAGGGCCGGCAtccttggaggaggctgccCAGAGGTGAGCCTTGCCCTAC
CTAA back to top
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