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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100095g16.10162.mrna |
| Orig protein id | gnl|cribi|Naga_100095g16.10162 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:203766..204747 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1807 ID=rna1807|Name=rna1807|organism=Nannochloropsis gaditana|type=mRNA|length=2191bp
GCACAGCCTGTACAGGTGCCCATCGTCCCACACGCCACGTTCACGGAGCC
GCCGCGCGTTGTTTCCTTGCCCATGGAGGAGGGGTCGGTTTTTGTGTGCA
GGTGCAGCAGATATGGATCAAAATCTAGCCAAGACACACCGGGGCTTAGC
GACGGCTTCCTTCTATGGGATAGCCCAGATCCGCTGAGTTTAAAAGCCGC
TTTTAAACCCCCTTTTCCCACGATGCACCCATCCGAACGCTGGTGCATGA
TCATGGTGCCGTTTTCAATGCCCTCGTGGTCTCAGATCGCGCCTTGCTTG
TTTCCTCGGGTGGATCTACACTCGTGACCAAGTCACTGGCATGGTCTAGG
CTTCAACCCTCGAATTTTTCCCCGACGGCGGCGACGGCCGAGGTGCGGGG
ACATGCGGGACGTGTTTTTCACAAATTACGGGCTTTTTCCACCCTTGTTT
TGGCTGCCTTGACCAGTTTCTTCTTTTCAATATCCACAGGGGAAAGGAGA
AGTGTGCCTGACTAGAAAGTACTATTTTTATGGGCGACAGGATTAGGAAA
GCAATCTGCGGACCAGGATACTGCTTTGCATCTCTCGTCTGTGCGAAAAC
GGGAAAGAAATATGCCACCCCCATCGCAACGTCGCGTTTACACCGGTGCT
TTGGCTCCCATGCTGGTATTCCAAACACAAAGGTAGGGGGCTCTTCGCTT
CCTACTTCTCCTTCCTCCTTCTCGTCCTCCACCGCGGTTTCCCCCCTGGC
TGACCCTCCCACTACATTCGGGGACCATCGCCGCCTGTACCCGCTGCCCT
ATAAACGATGCTCTCCTGCCTCTCTCCCGCTCAACGTTCAACACTCGGAT
CGTTTTCTGGTCTCACGACGCGGGCAGGCTCTTTACATGCAAACTTTTCG
CCCCCCGCATCTAAAAGAGGAAGGCGTGAAGGGCGTTGTGTTTCTCGTCC
ATGATTACGGTGATCACTCGTCCTGGTTCCTAAGGGACCTGGCCGTGGCA
CTCTGCCAACAGGAGTTTCTGGTTGTCTCTCTGGACCTGGAAGGACATGG
ACGTAGCGATGGCCTGCGAGGGCGGTTCGATTTTGGGCACGCCGTCATCG
ATTTGTGCGACCAGTACGGAGCGTTCTCCCTGGAGCAACAAAGCACGCCG
TGCTTCCTGCTGGGTGAAGGCTTGGGGGCTGCCCTGGCCTACAAGACGTA
TCAGATGCAAGGGGGAAGGTTCTGGGACGGGATCATCCTCCTCTCTCCCA
CCCTGGCCTTCCCCCCCCGCCTGCGTCCATCGCCCTGGATGCTCAGGCTT
CTCCGTCGGCTCGAACCTCGTATGGGCGACCTCCCCCTGATCCCCTGGGG
TCGGCAGTACCTGGACCTGCTATCCGACTCTGTCGCACGCCAGGAGGTGA
TGGAGAACCCTTTCTTTATCCAGCATGGCATGCGCGTTGCTACCATCTTT
CAGGTCCTGGCGGCCTTGGACGAGCTCTACCTTCACCCGCCCCCGTCCTT
TACCCCTGCCTCGCTCGGTCCCTCGCCGCCTTCCTCTGGGGTCCCTCCAC
GGACATCCCCCCCGTCGCCTGCAGTGTGTACATTCAACGAGATGACCGCT
CCTTTCCTGATTTTGCAAGGGGAAGAGGACCGCTTTCATGGTGGGAGGGA
GAGGGGAGGGGAAGGCGGGGGGGGGCGGGGGTGGTGGTGCGGGAATTGCA
CCGACAGGCGAAGAGCTTGGACAAGACGCTAAAATTCCTCCCCGGCCTGT
CACATTGCCTTCTTGGGGAAGGAAGGGGAGAAGGAGGGAGGGAAAGAGGC
TTGCAGCAGGTTTCTATGGAGGTGGTGGGGTGGTTGAATGCGCGGTGTTC
AAAGATTGTGGGCGGGGGACAGGGCGGGACGGTAGGGGGAGGCGAGGGAG
GGAGTGACGGAGGGGAAATGGAAGAAGAAGACTCCTTGGAGCTTGTGCAT
AGACCGTAGAGGGATGAGTGTGGAGAGAAAGAGATGTTGGGAGGAGGAAA
GGGGTGATATGATCATGCCCGACAGGGGCTACAAACCGCGGAGGACGATG
GCCTTCTCGATTCCGTGTGATCGATTTCTTTTCTTGCTTTGGATGGTTTA
CTGTGACCGCCAGGCGACAGGTCCTTTAATGAGTATTCCATAGATTACAA
CAAAGTCATTATAAATTACAAGGTACTTGCTCAAGAAATTT back to topprotein sequence of rna1807 >rna1807-protein ID=rna1807-protein|Name=rna1807|organism=Nannochloropsis gaditana|type=polypeptide|length=109bp
MLARRVLNQVSAEDQIHPINSDKLTNKTLFVVYRPLCAATWLVSLHLPGA
APASTATTADLAALCPRHGPSVPPTPSPPPPALERMFSRPRTNLPTATLA
LPWRKRRKC back to topmRNA from alignment at CM002458.1:203766..204747+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1807 ID=rna1807|Name=rna1807|organism=Nannochloropsis gaditana|type=mRNA|length=982bp|location=Sequence derived from alignment at CM002458.1:203766..204747+ (Nannochloropsis gaditana)
CTTCTGAGTCGTTGCGAAATATCCATGCTCACCGCTCCCATGCCATATTT
TTTCCCAATGTTTATAGAGCGTATAGATTTCATCTTCACTGTCTTTTTCG
TCGACAGCACCCTGCTGTGCTCGTTTCCTTGCTGTAACAGAGCATACGCA
GGTGTAGGATGTTGGCCCGACGAGTTTTGAACCAGGTAAGCGCCGAAGAC
CAGATCCATCCTATCAACAGTGATAAGCTCACCAACAAAACCCTCTTTGT
GGTATACAGGCCATTGTGCGCCGCCACGTGGCTTGTGTCGTTGCATCTGC
CCGGAGCAGCACCGGCCTCCACAGCAACGACAGCGGATCTCGCCGCTCTT
TGCCCAAGGTAAGCATTTTTTCTGTGCCCGCCGTCTTTACCGATGCACAG
GCATAAAGATGGTGCATGATTGCTCTGGCCCTGGTGCATGTTGCTTTGAA
GCCGGTAGTTCGGGATTTCCACGGAGCTGCTTGGGTTTGCCTGTTGTGCT
GCCCCTTGAATTACGTCGACATAGTCATCCGCTCGTACTGTATCCACCGT
GGCGCTCGACCTCAAGATTCGTCCTGGAGAATCTGTGCACTCGGTAGAGA
TTTTCTTGTTGATTGGCTCTGCCATCTTACACTTGtgacttccctccctc
ccgcatgGCAGGCATGgaccctccgtccctcccactccctctccacctcc
gcccgccTTGGAGCGGATGTTTTCACGCCCACGGACCAATTTGCCCACCG
CCACATTGGCCCTTCCgtggcggaagaggcggaaaTGCTGAAATTGTGCG
GCTTCAAGACCTTAGAGGCCTTGACCGAGGCGGCCGTCCCAGGCCACATC
CGTCTGAAAGCGCCGGTGGATTTGGAGCCCGCCAAgagcgagagcgaggc
cTTGACCGAACTGaaggccatcgcctccaaaaACAAGGTGCTCAAGTCCT
TGATCGGGATGGGGTACTACGAGacgggtagg back to topCoding sequence (CDS) from alignment at CM002458.1:203766..204747+ >rna1807 ID=rna1807|Name=rna1807|organism=Nannochloropsis gaditana|type=CDS|length=660bp|location=Sequence derived from alignment at CM002458.1:203766..204747+ (Nannochloropsis gaditana)
ATGTTGGCCCGACGAGTTTTGAACCAGGTAAGCGCCGAAGACCAGATCCA
TCCTATCAACAGTGATAAGCTCACCAACAAAACCCTCTTTGTGGTATACA
GGCCATTGTGCGCCGCCACGTGGCTTGTGTCGTTGCATCTGCCCGGAGCA
GCACCGGCCTCCACAGCAACGACAGCGGATCTCGCCGCTCTTTGCCCAAG
GCATGgaccctccgtccctcccactccctctccacctccgcccgccTTGG
AGCGGATGTTTTCACGCCCACGGACCAATTTGCCCACCGCCACATTGGCC
CTTCCgtggcggaagaggcggaaaTGCTGAATGTTGGCCCGACGAGTTTT
GAACCAGGTAAGCGCCGAAGACCAGATCCATCCTATCAACAGTGATAAGC
TCACCAACAAAACCCTCTTTGTGGTATACAGGCCATTGTGCGCCGCCACG
TGGCTTGTGTCGTTGCATCTGCCCGGAGCAGCACCGGCCTCCACAGCAAC
GACAGCGGATCTCGCCGCTCTTTGCCCAAGGCATGgaccctccgtccctc
ccactccctctccacctccgcccgccTTGGAGCGGATGTTTTCACGCCCA
CGGACCAATTTGCCCACCGCCACATTGGCCCTTCCgtggcggaagaggcg
gaaaTGCTGA back to top
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