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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100494g3.8969.mrna |
| Orig protein id | gnl|cribi|Naga_100494g3.8969 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:123754..125814 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1789 ID=rna1789|Name=rna1789|organism=Nannochloropsis gaditana|type=mRNA|length=1025bp
CTAGACTACGCTTGCCTTGACAGGACATCTGTCTCTGCTTTTTTCCGACT
CCCACGACGGCCTCGACGCGCTTTTTAAATCTCCTCCTTTTCCTCTGTGT
AGTGATGATGAGAGCTGGCCAAGCGGTCGGAACCCTCACAAAGCAAGCAT
GGCAAACAACAAGTGGCACTTCACTCAAGATGACGGTCTCTTTAGCCTTT
ATTCCTGCATTCAATATCCATGTGGGGGCTTTCTCTCGCGTGAGGTACTC
GAGTCGTCCTGTAAAAGCTGGTTTCTCTACCTACCAAGGTCTTGATCCGG
ACAGAGCCAAAGATGTGCTCAAAAAGGCGCAGGCAGTTTGTTTCGACGTA
GACTCCACCGTGTGTGCAGAAGAGGGCATCGACGTCCTCGCGGCATTCCT
CGGGCAAGGGCAGGCGGTGGCGGATTTGACCGCGAAGGCCATGGGCGGCT
CCGTGCTATTCCAAGACGCGTTGAAAGGCCGTTTGGACTTGATCAAACCC
TCACGCGCCGACATTCAGAACTGTCTGCTTCGACACCCGGCCACCCTCTC
CCCGGGAGTAAAGGAATTTGTTGGTCGTCTTCAAGCGCGGGGCACAGCGG
TCTATTTGGTCTCGGGCGGCTTTCGACTGATGATCGAGCCCGTCGCTGAC
CGGCTCCTGGTGCCCCGGGACCGCATATACGCCAACACCCTCCTCTTCGC
AGAGAATGGTAGCTACAAGGACTTCGACCCCAACGAGCCTACCTCACGCG
ACGGTGGCAAAGCGGCCGTGATCAAATCCCTGAAGGAGAAGCACGGCTAC
CAAGATGTCCTTATGGTGGGCGATGGGGCCACTGATATGCAGGCCCGACC
CCCCGCGGACGCATTCATTGGGTATGGCGGGGTGGTGGTCCGAGACCCGG
TCTTGCAAGGCGCCGATTGGTTCGTGCGTTCTTTTCAGGCGTGCGCCTTC
AATTTTGGTGAGTATGCACGTACTTCAATCTTGAGAAACTCGGGTGATTT
TTTGAAAGTAGAGGTGCACGTGTGA back to topprotein sequence of rna1789 >rna1789-protein ID=rna1789-protein|Name=rna1789|organism=Nannochloropsis gaditana|type=polypeptide|length=223bp
MLYCRLIHPQSSPLLPPPQGYLHTHASPLLRLRLLSSPLFRFRGRTGAPL
FRCRPCLHAPPPHLPPRPSLPPSIHPPGGFRLFFAILPRPAPAPPSSPFL
SLPHRLVRLPGSHRSRRSPPSHPHRGLPPRGASPFRRGLLGCMLCPGGPD
GLHGVLPSALRLRRLLLSAPSRGRCALFLAMIFCLSCSLPPSLPPSLLPS
LPPSFLFSPRPFLCFRRSLPMLA back to topmRNA from alignment at CM002458.1:123754..125814+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1789 ID=rna1789|Name=rna1789|organism=Nannochloropsis gaditana|type=mRNA|length=2061bp|location=Sequence derived from alignment at CM002458.1:123754..125814+ (Nannochloropsis gaditana)
AAACGTGACTTTCAGTTTCCTTCTCGGCGGGCGGAACACATAAATCAGCG
ACGCTGCCAACTTCCTTGCGGCGGCTACCATGGCACACGACCCACAGCCC
AATTCGTTCACTCCAAAGGCACAACAGGACGCAATGGATGGAGATACTGT
GGTTCGCTTTAATGTAGGCGGGGAGGTGTTCATGACGACCAGGTGAGTTC
AGTGACACCACGGCTGACATCACTCATGTTCAAGGATCAGCGAGGCCTGG
CACATGCCATAGGATGTCGTCCTCACAAGTGTGATATTTGGCGCATATTC
GAAGAAATGCTTATTTCAACGTCATTTCTCTTGCATAGTCTCCAAAAGTG
CATGAAAAGCAATCGCCTCCCGTATGCTTGCGTTCCCTGCTTTTCTCTCT
TGCCATTGTCCTCTGACTGTGCACCCGTGCAGTATCGAatatttttcctc
ccttgcgtTTATGTCTTGATCAGGCTCTTACGACCTTAAATCGCGGGATC
AGGTTGGGAGAGAGTCAGGGTTTGAAATCATTGcactcgcccctcccctt
ctaccAGTGAAAGCGAGCCACATCCTACGTTCCATCTCGACCCTTCGATT
CTGCTGCCTTTGACATCGTTGCGAATGAACTCGATAGAGCCATCGTGCCG
TGTAGACGTGCCATCTAAATAATAGATGCTTTATTGCCGCTTAATCCATC
CTCAATcgtccccccttctccctcctccacagggCTACCTTCACACGcac
gcttcccccctcctccgtctccgtcTTCTTTCGTCGCCTTTGTTCCGGTT
CAGAGGACGAACGGGGGCTCCCCTTTTTAGATGCAGACCCTGCCTGCATG
CGccacctcctcacctccctccgcgcccgtcgttacctccctccatccac
ccgCCTGGGggcttccgcctcttctttgccatactcccccgtcccgcacc
tgctcccccttcctctcccttcctctctctcccccaccgcctggTCCGCC
TTCCTGGCTCACACAGGTCTCgacgctctcctccctcccacccacacCGC
GGCTTGCCCCCGCGTGGGGCCTCCCCGTTTCGACGTGGCCTCCTCGGGTG
TATGTTGTGCCCCGGGGGGCCAGACGGCCTTCATGGTGTACTGCCCTCAG
CTCTACGGCTtcgccgcctgctcctctccgCTCCCAGCCGCGGCCGGTGC
GCACTTTTCCTTGCGATGATTTTCTGCCTTTcgtgttccctccctccctc
ccttcctccctccctccttccctccctccctccctctttccttttctcgc
cccgtcctttcctttgtttTAGACGGTCGCTCCCGATGCTTGCTTAACAT
GCCGCGTCCTGATGATACGATTCCGCACCAaccttgtccccccccttccc
tctctctgatcgttgcctccccccccccggccacctCAGCCTTGCGTCTC
CGGGTGACCCTGGCCTCTCCCAACCCCTCTCTCGCCGTGGCGATCGGCCT
CATCGACAGCCTAGGGCGGGCTGCAGCACGGTCGTACCCTACCCTTGGCA
TCTCCAGTACCCCCGCGGGAGGCTTCGTTCACTGgtaaggagaggggagg
gagggaggaagggaagggcgggaggttgtAGGCAGGCCCTCGACGCGGCC
CAAGTCCTGATGAGATCTGTCCCCCTCTCCAACCGTTGCCAGGGCACCTC
CTTGTGCGCTTTCCGCCCACGCACCGGCGTCAATGGCGAGTCCTGGTGGG
CAggaaggtggagagggagggggaggagggggcggcgcaGCGGacggggg
cagagagggaagaatgcAATGGCAGGGGCTCATTGATGGCAAAAGGGTGG
TAGGagggacgacgggaggggcgggaggggaaagggaaggcgggagggag
acgttGTCATCGGAGAGCCGGCATACCCCGCCTtccacgggggaggaggg
ggaggaggaggagggtcgcTGGGGCGGGGTGCAAGACAAGGACGAGGTCT
TTTTCCGGTtgaatgaaggggaggggcgttTGTCCATAGCGACttggcgg
gagggcgggcg back to topCoding sequence (CDS) from alignment at CM002458.1:123754..125814+ >rna1789 ID=rna1789|Name=rna1789|organism=Nannochloropsis gaditana|type=CDS|length=672bp|location=Sequence derived from alignment at CM002458.1:123754..125814+ (Nannochloropsis gaditana)
ATGCTTTATTGCCGCTTAATCCATCCTCAATcgtccccccttctccctcc
tccacagggCTACCTTCACACGcacgcttcccccctcctccgtctccgtc
TTCTTTCGTCGCCTTTGTTCCGGTTCAGAGGACGAACGGGGGCTCCCCTT
TTTAGATGCAGACCCTGCCTGCATGCGccacctcctcacctccctccgcg
cccgtcgttacctccctccatccacccgCCTGGGggcttccgcctcttct
ttgccatactcccccgtcccgcacctgctcccccttcctctcccttcctc
tctctcccccaccgcctggTCCGCCTTCCTGGCTCACACAGGTCTCgacg
ctctcctccctcccacccacacCGCGGCTTGCCCCCGCGTGGGGCCTCCC
CGTTTCGACGTGGCCTCCTCGGGTGTATGTTGTGCCCCGGGGGGCCAGAC
GGCCTTCATGGTGTACTGCCCTCAGCTCTACGGCTtcgccgcctgctcct
ctccgCTCCCAGCCGCGGCCGGTGCGCACTTTTCCTTGCGATGATTTTCT
GCCTTTcgtgttccctccctccctcccttcctccctccctccttccctcc
ctccctccctctttccttttctcgccccgtcctttcctttgtttTAGACG
GTCGCTCCCGATGCTTGCTTAA back to top
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