rna1786, rna1786 (mRNA) Nannochloropsis gaditana

Overview
Namerna1786
Unique Namerna1786
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length257
Alignment locationCM002458.1:119517..120237 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100494g1.8972.mrna
Orig protein idgnl|cribi|Naga_100494g1.8972
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:119517..120237 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100494g1gene1716Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1786rna1786-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28891.1cds1782Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1786 ID=rna1786|Name=rna1786|organism=Nannochloropsis gaditana|type=mRNA|length=257bp
CTCCCCAGCGGTCGCTCGAGCAACGCAAGTCCCTCTTGGCCGGGCCGATG
GAATTTTTCGACGAGTTGGAGCGCCTTGGGCCCCTTTTGGGGGTAGGAGG
CAGCCTCTTCAGTGCGAAAGATGTGCCGCGTGCATCCACGGGGGAGGGCA
AAGGAATTTTTCCGCGGATGGGAGGAAGGGTGGGAGGTAGGGAGGGACCA
GGACGGGGGGGAGGGCGGGAGGGAGGGGTAGGGGGTGGAGTGGAAGAAGA
GGGATAG
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protein sequence of rna1786

>rna1786-protein ID=rna1786-protein|Name=rna1786|organism=Nannochloropsis gaditana|type=polypeptide|length=90bp
MASPPRSSSPSSSSLWEAALPSSDSQLQRLSEIDAYVKSISLIDNEEDED
KQASTLSQSTPRARSESISASRTSADHDGIGGLLRRWKAR
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mRNA from alignment at CM002458.1:119517..120237-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1786 ID=rna1786|Name=rna1786|organism=Nannochloropsis gaditana|type=mRNA|length=721bp|location=Sequence derived from alignment at CM002458.1:119517..120237- (Nannochloropsis gaditana)
ATGGCCTCTCCCCCACGCTCCTCTTCTCCTTCATCGTCGTCGTTGTGGGA
AGCCGCTCTGCCGTCGTCGGACTCACAATTGCAGCGTTTGAGTGAGATCG
ATGCTTACGTGAAGTCCATCTCCTTGATAGACAACGAAGAAGACGAGGAT
AAGCAAGCGTCCACCCTTTCCCAATCCACTCCCCGTGCAAGAAGCGAGTC
GATTTCTGCGAGTCGGACGAGTGCCGACCACGACGGGATTGGAGGGCTGT
TGAGGAGGTACGGGGTTCTACTGTTGTGGCATGGCTCGTCAACGAGGAGG
CAAAGAAGGCATGGGGAGGTCAGCCTCAGAAAGGATTTTAGTTGTTTTTT
GAATAGAAAGGGCTGTGATGCCTTGCTAAGGCGTGTGTCTCACAGGACAC
GGACCGTACAATCCGCAACTCACAGGCTCGAGGAGGAAGGGGGGGGAGTG
GAGGGTCGGCAACACGGGATGGAGGCGGCCGCGCGTCATTACATGCTCTC
ATTGCAGGCGTACGATGAGGCGTTGGGGAAGGTGCAAGAGAAGGTAGGAG
GGCAAGTGGGGGGGCAAAGAGACGTTGAGCGAGCCCACCCGCCCTCCTGC
CAACAGAGAGCTCCTCCACACCGGTGAAGGGGAGAGCCTCCTCCCCGCCC
TCCCTCTCGCCCTTCCTCACTCCCTCCCTCCCCCCTCCGCCCCCGCTTTT
CCTAGGTGGAAGGCGCGCTAG
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Coding sequence (CDS) from alignment at CM002458.1:119517..120237-

>rna1786 ID=rna1786|Name=rna1786|organism=Nannochloropsis gaditana|type=CDS|length=546bp|location=Sequence derived from alignment at CM002458.1:119517..120237- (Nannochloropsis gaditana)
GTGGAAGGCGCGCTAGATGGCCTCTCCCCCACGCTCCTCTTCTCCTTCAT
CGTCGTCGTTGTGGGAAGCCGCTCTGCCGTCGTCGGACTCACAATTGCAG
CGTTTGAGTGAGATCGATGCTTACGTGAAGTCCATCTCCTTGATAGACAA
CGAAGAAGACGAGGATAAGCAAGCGTCCACCCTTTCCCAATCCACTCCCC
GTGCAAGAAGCGAGTCGATTTCTGCGAGTCGGACGAGTGCCGACCACGAC
GGGATTGGAGGGCTGTTGAGGAGGTGGAAGGCGCGCTAGATGGCCTCTCC
CCCACGCTCCTCTTCTCCTTCATCGTCGTCGTTGTGGGAAGCCGCTCTGC
CGTCGTCGGACTCACAATTGCAGCGTTTGAGTGAGATCGATGCTTACGTG
AAGTCCATCTCCTTGATAGACAACGAAGAAGACGAGGATAAGCAAGCGTC
CACCCTTTCCCAATCCACTCCCCGTGCAAGAAGCGAGTCGATTTCTGCGA
GTCGGACGAGTGCCGACCACGACGGGATTGGAGGGCTGTTGAGGAG
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Synonyms
Publications