|
|
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_101383g1.1203.mrna |
| Orig protein id | gnl|cribi|Naga_101383g1.1203 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:84996..86233 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1773 ID=rna1773|Name=rna1773|organism=Nannochloropsis gaditana|type=mRNA|length=1476bp
CCCTAAACACAGAGAGAGGAGCAACCGCTTCCAGAAGACCGTCGGTGGCA
CTTGCATTGGTCCTGGTTGTACTGCAACCGGGAGGGGAAACTGAATGCGA
AGATATACGTTCACTGAATCAGTTTCCCTAACTCCGCAACACTCGGCCCT
AAACACCACGCAGGCCACATGCCACTCCCTCCGCGTCCAAGCACCCACGT
CAAGGCGTAAGAAGGCACCCTTACGCGGCGTGCACGCGCCCGCTTTCTTC
GGTCTACTTCACTCTTTTCCCGCTTGTTGAAGAAGGAAGAATCTCCAGGC
TTGCGCCTCAAGTCTTCAATTTCCAGTCTCCATCTCTCTCTCTCTTCGTT
TTTCAAAACCACCGCCCCGTGGGCGTGTGGTCACTACGCTGGGATTTCGC
GGAATGACCATATGTTGATCAAGTCACGCGGCTTGTCCGGCCTGTGCGGC
TTTGTATATATTCGTGACACGTCACACCCTGTGTTCAGAAGTCTGTCTCG
CCCCGGCGGCGAAGCAACCCCTCTCGTCGAATTCTCTTCTGATGGAGACG
TTGGCGTCTAGGCATCGTCATCACTAGGTACAGCATGCATGAGAGTATGC
AAGTGCACCCTCTTTCCGCGCGGTGTATGTATTTGTAGCTGTCTGAACGT
AATGGATTGGAAACTTATTACAACAAGCATCCAACCTCCTCATCCGCGAA
GCCCGTCTCCGGCCGCAGGGCAAAACATACGTTTTCAATTATTTCTCATG
CATCGTTGCCAAGTTATGGCTCGTCCATCCTTCAATAATTGAGTTTTTAC
ATGCACGTACAAGAATTGTGGTGACCATTCGGCTATTCGGTGAATTGTCT
GTCCACTTCCACTCCATTACCTTGGATCACAACACGGATATGGGCCGCTA
GGGTTCCTGTCATTACCGTACGTCTTTGTGGCATACCACGTTCATCCACA
CAGCCACAAAGATATCAACTTCCTGTGGCATAAGCCTTACGAAAAGTGTC
TTTCAAGCTCGTAATGAGATTACGGACGCTCAATTCTGTTTGTTCTTTTT
CTAGCACGAAGGCCCCGGCACCAACACCATGCGGCCCTCCGTTCCTCCGC
CGGCTCGTCTTTTGTGGGCATTCGACTTCGACGGTGTGCTGTGTCATTCT
GCCAAAGAGTTATGCATGACAGGGTGGGTTGCGGCCCGTAGATTTTGGCC
GAGTGAGGCACATTCATGGCCAGACAGGCCCGATCCCAATATCTTGTCTT
CGTTCGCCACCGTGCGGCCGGTGGTGGAAACCGGATGGGAGTCCATGCTC
ATCACCCGCGCTTTACACGAGGGAGAGTACTCCACGGAAACGATATTAAA
AGACTACACGGCATCTCTCCGGGAGACACTTATAAAGGAATACGGGGAAT
ACCCTCCGGAGGCATACATGGAGACCTTTCGATCCGTTCGACAGGAATGG
ATGAACAGGTAGGAAGGGGGGAAAGG back to topprotein sequence of rna1773 >rna1773-protein ID=rna1773-protein|Name=rna1773|organism=Nannochloropsis gaditana|type=polypeptide|length=282bp
MLHTLLRFPPPPPPRPPPAPCAISCRATALSSNTCSRVSIFPSAWLPSAG
RTPVSQGRERGRGGKGRREGGRERGRKGRRGEGEREGSRSELEDCDTTPC
ASPISCFLPSNPRTFVRPNDSSFPPSLLPSLPPSLPPCQPPQKHELLRCE
DMIALLLFPPEKLERGLFSVARDFTPRPGDPVGRDNFKGKRREGPQTTEH
RREGGTRMSTSIFCNRETRGFSMTCKSLKACSLTPTPCSKNGPADTWKRN
LAVLSSFPLVPCDCGPFPFLLSLPPLSPYFLS back to topmRNA from alignment at CM002458.1:84996..86233+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1773 ID=rna1773|Name=rna1773|organism=Nannochloropsis gaditana|type=mRNA|length=1238bp|location=Sequence derived from alignment at CM002458.1:84996..86233+ (Nannochloropsis gaditana)
ccatgctccacaccctccttcgcttcccacctccccctccgccccgccct
cccccggcaccttGCGCCATTTCTTGTAGGGCTACGGCCCTATCCAGCAA
CACCTGCTCCCGCGTCAgtatctttccctccgcgtGGTTGCCGTCCGCTG
GCCGCACTCCTGTCTCGCAgggacgggagagagggagaggggggaaggga
aggagggagggagggagggaaagagggagaaagggacggaggggggaggg
agaaagggagggaagcaggagtgAATTGGAAGACTGTGATACCACGCCCT
GTGCCTCCCCCATCtcgtgcttcctcccctctaaTCCTCGTACCTTCGTT
CGTCCGAAcgactcctccttccctccttccctccttccctccctcccccc
ctccctcccgccctgccagCCTCCTCAAAAGCACGAGCTGCTCCGGTGTG
AAGACATGATTGCCCTGCTGCTGTTTCCGCCGGAGAAATTGGAGCGTGGC
CTCTTCTCTGTTGCTCGTGATTTTACCCCCCGCCCAGGCGATCCTGTGGG
AAGGGACAATTTtaaagggaagaggagggagggcccccaGACGACTGagc
acaggagggaaggggggacaaGGATGTCCACATCCATCTTTTGCAACCGC
GAAACCAGGGGGTTCAGCATGACGTGCAAATCATTGAAAGCTTGTAGCCT
CACGCCCACGCCCTGTTCGAAGAACGGGCCCGCGGACACTTGGAAAAGGA
ATTTAGCTGTCTTATCATCATTTCCCCTGGTCCCTTGTGATTGcggccct
tttcccttcctcctgtctcttccccctctttctccgtaTTTTCTCAGTTA
GGCATACATACCGTCGAGGAGGTGGCTCTGGAGGAGCGGTAGTGACGGCG
GGGGCTTTCACGTGGGCAAATGATAGTGTTTTAGGGACGGGAGCCGACGA
TGATGCGGTCATGGTGATAAGAATACACCCCACGGTCTCCGGCAAGGTTT
TAAAATTCCCTGTGCCAATGCAAAACTAATGGCCAACTAGGCAACCCAAA
AGTCACCGCTGCATCTGCATGTATGGGACAGCGGGCATGAATGCGCTTTT
GAAACAAGCAAAGAAGTTGAAATTTGGCTAACCAAAGAGCACTAGAGTCG
AGGCGTTTTGAAGTctagagagaggaggagtcaTTCCTGTTGAAAACACA
GGGTTCAAGGCGCAAAACAAAGGCCTGTAGCTCGCACA back to topCoding sequence (CDS) from alignment at CM002458.1:84996..86233+ >rna1773 ID=rna1773|Name=rna1773|organism=Nannochloropsis gaditana|type=CDS|length=849bp|location=Sequence derived from alignment at CM002458.1:84996..86233+ (Nannochloropsis gaditana)
atgctccacaccctccttcgcttcccacctccccctccgccccgccctcc
cccggcaccttGCGCCATTTCTTGTAGGGCTACGGCCCTATCCAGCAACA
CCTGCTCCCGCGTCAgtatctttccctccgcgtGGTTGCCGTCCGCTGGC
CGCACTCCTGTCTCGCAgggacgggagagagggagaggggggaagggaag
gagggagggagggagggaaagagggagaaagggacggaggggggagggag
aaagggagggaagcaggagtgAATTGGAAGACTGTGATACCACGCCCTGT
GCCTCCCCCATCtcgtgcttcctcccctctaaTCCTCGTACCTTCGTTCG
TCCGAAcgactcctccttccctccttccctccttccctccctccccccct
ccctcccgccctgccagCCTCCTCAAAAGCACGAGCTGCTCCGGTGTGAA
GACATGATTGCCCTGCTGCTGTTTCCGCCGGAGAAATTGGAGCGTGGCCT
CTTCTCTGTTGCTCGTGATTTTACCCCCCGCCCAGGCGATCCTGTGGGAA
GGGACAATTTtaaagggaagaggagggagggcccccaGACGACTGagcac
aggagggaaggggggacaaGGATGTCCACATCCATCTTTTGCAACCGCGA
AACCAGGGGGTTCAGCATGACGTGCAAATCATTGAAAGCTTGTAGCCTCA
CGCCCACGCCCTGTTCGAAGAACGGGCCCGCGGACACTTGGAAAAGGAAT
TTAGCTGTCTTATCATCATTTCCCCTGGTCCCTTGTGATTGcggcccttt
tcccttcctcctgtctcttccccctctttctccgtaTTTTCTCAGTTAG back to top
|