rna1761, rna1761 (mRNA) Nannochloropsis gaditana

Overview
Namerna1761
Unique Namerna1761
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length486
Alignment locationCM002458.1:61142..62439 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_101399g1.1437.mrna
Orig protein idgnl|cribi|Naga_101399g1.1437
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002458.1supercontigCM002458.1:61142..62439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_101399g1gene1694Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28916.1cds1757Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1761rna1761-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1761 ID=rna1761|Name=rna1761|organism=Nannochloropsis gaditana|type=mRNA|length=486bp
CCTCCCTTTCACTCTTCCTCAAGGGCCTGTGGCTTGGCACCTCGGCAGGG
ATCATGAAAACTGTCCCAAAGTACATGACTGCGGTGGTGGTGAAGGATAA
GATGGAAGAATGGCTCGACCCCGTTCCCGAAAATGCCGATAATGCCCGAT
CTCTCCTCGTCCAACGATCGGCCATCAAGGCGGTAACGGCTGGGCTTGCG
GGGGCTGTCCTCACAAATCCGTTGGATGTGGTGCGCAATGAATGTTTTAA
AAGGGAGCAGAGTCTCGGCCCTACCCTCAGAGGGCTGGTGGAGGAGGAAG
GTGCCCGATTCCTCTGGAGGGGAATGGGCAAGAATGTGGTAGCTGTGACA
ATCCCAGTAGCTGCGACTATTTTTTTGGCCGATATAATCAGCCGCGCACG
GGGCTTGTGAGAGAAGGGAGGGGGGGAGGGAGATAGGAAGGGAGGAAGAA
CACAAGTAAAAGAATGTATCTGTATAAGCCTCGAGA
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protein sequence of rna1761

>rna1761-protein ID=rna1761-protein|Name=rna1761|organism=Nannochloropsis gaditana|type=polypeptide|length=342bp
LPPSHSRAASILRRHSVSTAAKQAGVVEVIVRAKEGGRGRGGGRGGGRGG
GRGEGRGGNPDLSRPPPTAGPPSLPPSGGATPLLVSSLQPPPSGSGGRPG
AEGEQGAGAVTAWREGGRRSGHKRPLAREVGHGEEEAAMEDKQGSHEGGR
EGGGEGRGEGGGGEEGENLNASTGNGFPCPPSPSLAPGVEGKPGLRSADP
KSRSLMERKRHRVVDSSIASPPTRSHPCTAPRAGGTANGMEGVADVRGGE
MMMGQEGGGQEEGGMSEDNKGREMRRREESSQRPCVGNVEGAGQAEEGGE
KAKQRVQDTGEGLDRGDGDEVENRGQEEVDEDEAALWAVLGS
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mRNA from alignment at CM002458.1:61142..62439-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1761 ID=rna1761|Name=rna1761|organism=Nannochloropsis gaditana|type=mRNA|length=1298bp|location=Sequence derived from alignment at CM002458.1:61142..62439- (Nannochloropsis gaditana)
CTCCCTCCTTCCCACAGTCGCGCCGCCTCCATTCTGCGCCGGCATTCCGT
CTCCACTGCAGCCAAGCAGGCAGGCGTGGTGGAGGTCATCGTCCGGGCAA
AGGAGGGCGGGAGGGGGCGGGGGGGAGGTCGAGGAGGAGGTCGAGGGGGA
GGTCGAGGAGAAGGTCGAGGCGGGAATCCAGATCTTTCCCGTCCCCCTCC
GACCGCTGGTCCTCCCTCGCTCCCTCCCTCCGGCGGTGCCACCCCTCTCT
TGGTCTCTTCACTTCAGCCCCCTCCCTCTGGATCTGGCGGCAGGCCTGGT
GCCGAGGGAGAACAAGGGGCAGGGGCGGTGACGGCGTGGAGGGAGGGAGG
GCGACGGTCGGGACACAAGCGGCCATTGGCCAGGGAGGTCGGTCACGGCG
AGGAGGAGGCAGCGATGGAGGACAAGCAGGGCAGCCACGAAGGAGGGAGG
GAGGGAGGGGGAGAAGGAAGGGGAGAAGGAGGGGGAGGGGAAGAGGGAGA
GAACTTAAATGCTTCAACAGGAAATGGCTTCCCGTGCCCGCCCTCCCCTT
CCCTTGCACCCGGCGTGGAGGGGAAGCCGGGGCTCAGGAGTGCCGATCCC
AAAAGCCGGAGTTTAATGGAGAGGAAAAGACACCGTGTTGTAGATTCCTC
TATCGCGTCCCCCCCCACCCGTTCCCATCCCTGTACAGCTCCGAGGGCGG
GGGGTACAGCGAATGGGATGGAGGGTGTAGCGGATGTCAGAGGAGGAGAA
ATGATGATGGGACAAGAAGGAGGGGGGCAGGAGGAGGGAGGGATGAGTGA
AGACAACAAGGGGCGGGAGATGCGGAGAAGGGAAGAGAGTTCTCAAAGGC
CGTGTGTTGGGAATGTGGAGGGGGCGGGTCAAGCGGAGGAGGGAGGAGAG
AAGGCGAAACAAAGAGTACAGGATACAGGGGAAGGACTGGATAGAGGAGA
TGGGGATGAAGTCGAAAACAGAGGGCAGGAAGAGGTGGATGAAGACGAGG
CTGCGCTGTGGGCTGTGTTAGGTTCCTGATTAAAAACAAGAGAGCAAGAG
CATACGGCCTGGAGCTCCACCACAATGCGATGCCGCGTCGGGCGTAATTC
GCCTTTTTTCTTCATATGGACTGCTTCTCATCCTCGAAACGCTAGATCGG
GGGCTTCTCGACTCCGTAATTACCATAGTGACTAATATGGTGAACCAACC
GCCCGTAGTCTTTACGCTGGAGTCATTATACAAGACTCATTTTTCTGAGG
TCAATCCGTTAGCCTACCCGGAGGAAGCGGCACTATCAGACCCCGATC
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Coding sequence (CDS) from alignment at CM002458.1:61142..62439-

>rna1761 ID=rna1761|Name=rna1761|organism=Nannochloropsis gaditana|type=CDS|length=1029bp|location=Sequence derived from alignment at CM002458.1:61142..62439- (Nannochloropsis gaditana)
CTCCCTCCTTCCCACAGTCGCGCCGCCTCCATTCTGCGCCGGCATTCCGT
CTCCACTGCAGCCAAGCAGGCAGGCGTGGTGGAGGTCATCGTCCGGGCAA
AGGAGGGCGGGAGGGGGCGGGGGGGAGGTCGAGGAGGAGGTCGAGGGGGA
GGTCGAGGAGAAGGTCGAGGCGGGAATCCAGATCTTTCCCGTCCCCCTCC
GACCGCTGGTCCTCCCTCGCTCCCTCCCTCCGGCGGTGCCACCCCTCTCT
TGGTCTCTTCACTTCAGCCCCCTCCCTCTGGATCTGGCGGCAGGCCTGGT
GCCGAGGGAGAACAAGGGGCAGGGGCGGTGACGGCGTGGAGGGAGGGAGG
GCGACGGTCGGGACACAAGCGGCCATTGGCCAGGGAGGTCGGTCACGGCG
AGGAGGAGGCAGCGATGGAGGACAAGCAGGGCAGCCACGAAGGAGGGAGG
GAGGGAGGGGGAGAAGGAAGGGGAGAAGGAGGGGGAGGGGAAGAGGGAGA
GAACTTAAATGCTTCAACAGGAAATGGCTTCCCGTGCCCGCCCTCCCCTT
CCCTTGCACCCGGCGTGGAGGGGAAGCCGGGGCTCAGGAGTGCCGATCCC
AAAAGCCGGAGTTTAATGGAGAGGAAAAGACACCGTGTTGTAGATTCCTC
TATCGCGTCCCCCCCCACCCGTTCCCATCCCTGTACAGCTCCGAGGGCGG
GGGGTACAGCGAATGGGATGGAGGGTGTAGCGGATGTCAGAGGAGGAGAA
ATGATGATGGGACAAGAAGGAGGGGGGCAGGAGGAGGGAGGGATGAGTGA
AGACAACAAGGGGCGGGAGATGCGGAGAAGGGAAGAGAGTTCTCAAAGGC
CGTGTGTTGGGAATGTGGAGGGGGCGGGTCAAGCGGAGGAGGGAGGAGAG
AAGGCGAAACAAAGAGTACAGGATACAGGGGAAGGACTGGATAGAGGAGA
TGGGGATGAAGTCGAAAACAGAGGGCAGGAAGAGGTGGATGAAGACGAGG
CTGCGCTGTGGGCTGTGTTAGGTTCCTGA
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Synonyms
Publications