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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100142g12.2512.mrna |
| Orig protein id | gnl|cribi|Naga_100142g12.2512 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002458.1 | supercontig | CM002458.1:12872..15272 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1744 ID=rna1744|Name=rna1744|organism=Nannochloropsis gaditana|type=mRNA|length=2637bp
ATGCCCCGTCGGCTATCCCAGCAGTCTCTGCACCCTCCGCACCCTCTACG
GGAAGCGTCCAGCAGCAGCAACACTACCTACTCGGTCTTCCGTGGCCCCG
CCTCTTGGACGGGACCTCCGCCCCGTCCTCCCCCCCTCCCTCCCCTCCCT
TCCTGGTCCTGGCTTTCGCCGTCGACTTGGCTGGCGGCGTCCCGGGGCAT
GGACGACCTGCTTCTCCTCCTGCTTCTTGGCGTGGCTGCCCTTCTCGTCA
CCCTCTTCCAACGCTCCTCCTTAACCTCTTCCTCCTTCCTGCGCCCGTTC
TCCCCATCCTCCCTCCCCACCCCGGACCCTGCCTCCCCCCCCCCTACCCC
CGACGCCGAGGGGGTCTTGCGCGTGGGCCGACTCCGGGTCTGTGTGGAGG
AGGTTTTGGGCTTCGGCTGCCACGGGACCATCGTCTTCAAGGGCAAGTTG
GACGAGCGCCCCGTGGCCGTGAAGCGGATGCTGCGAGCCTTCCACGCGGC
GGCGGACCGGGAGATCCGCCTCTTGATCGAGAGCGACGGGCACCCCAACG
TGGTTCGGTACTTTTTGAGGGAGCAGAGCGGGGACTTCGTCTACCTGGCC
CTGGAGCTCTGCGTGTGCTCGCTGCGGGACGTGGTGGGGCGGCTGGAAAA
GGCGATGGAGGCTGTGGGGGAGGGTGGGGGCGGACGCCGGCGGGCCCAGC
AGAGCCGCAGGGTCTTTGTGGGGAAGCTCTCGCAACGAGAGGGGGCCAAA
GACGGGGCGGAGGGCAACGAGACGCTTGGCGTGGTCCCAGCGCCTGTGCG
CAGCGCCCTCTTCCAAATCGCCAAGGGCGTCACGCACCTCCACTCCCTGC
GCATCGTCCATCGCGACCTCAAGCCTCACAACATCCTCCTCGCCTCCGCC
TCCACCACCCCCTCCGCCCCTGCCTCCCACTCGCCCTCCGCCCCGTCCTC
CATTCCCCCCCTCCTGGTCGACGGCGTGGAGGAGCTCAGCCAGTACGTCT
GCAAGATCAGCGATATGGGGGTGGGCAAGCTCCTTGCCCTGGGGCAATCC
TCCTTCGGCGTCACGTCCCTCTCGGCCCCGGGAAAATCCGGAAAATCCCG
CTTTCCTCCCCCCTCCACCATCGCCACCACAGGCGCGCCACCTTCCTCCT
CCTCCTCCTCCTCCTCCATGGCCCCTTGTCCCGAAGAGGCACAGTCCTCC
GTTCCGCTGGGGCCGGGAAGTGTGGGCTGGCAGGCGCCGGAGGTGTTGGC
GGCGCGCCTGGGGCTGGAGGACACCGGGGCCGTGGCGGGAGGCAGAGAGG
AGGAAGTCGGGGCTGGGAATGGGCACGGGCTCGCGGGGTCGAGCAGCTCT
TTCCCCGCCCCTCCCTCCGCTTCGGGGCGGCGAACGCAGGCCGTCGACGT
CTTCTCCCTCGGCTGCGTCTTCTACACGGTCCTGGTCCCGGGCGCCCACC
CTTTCGGGGAGTGGTACGAGCGGGAGCGGAACATTCTAGAAGGAAAGCGG
GACCTGAGCGGGCTGGCGGAGAGCCCCGAGGCCCGGCATCTCCTCGAGGC
CATGCTCTCCCCGGACCCGGCGCGGCGACCCACAGCCCGCATGGTCCTCC
ACCACCCCTTCTTCTGGGCAGAGGACCGGCGCCTGGCGTTCCTCGTCGAC
TTCTCGGACCGGGTGGAGCAGGAGCCGGCGGACTCCTTGCTCGCCCTGGC
CGTGGAGGCAGGAGCCGCGGAGGTGGTGGGGTCGGCCTGGGACGCGCGTC
TCGACGCCGGGCTCCTGGTGGACGTGAACAGGTACCGGAAGTACGATACG
GCCTCGGTGCGGGACTGTCTCCGCATCCTCAGGAACAAGCGACACCATTT
CCACGAGCTTCCCGAGGCGGTGCAGAGGGTCCTGGCGCCCCTACCCGGAG
GGCTGTATCGCTACTGGCAGCGGCACTTCCCCCGCCTTTTGATGCACTGC
CACGGCGTCTGCACCCGCCTGCTCACGCGCGACAAGCTCTTTCAGACCTA
CATGGGGCCCGAGAAGGATCTGCGCCAGGACTACGAAGAGGACAACCAGG
TGGCAGCCTCGCAGGAGCTCTCTCACCGAGGCCAGGGGAAGGCAGGGGGG
GAAGGCCCTCCCCTTTTGAGCCAATCAGGCGCCCCGCACACGCCTAGCCT
TGAAGAGAAAGGCGCTGGCGCCGAGCCGGCTTCTCCCGATCCAGCCAATG
CCCTCTTTCTCTCCCAAGTTGTCGTCTTTGCGGGCAGCAGCTTGGCTGCA
TCCTCGAACAGCCGGGGCTGGAGGGGAGGGCCGGTAGTGTTGGAGGAGAA
AGGAGGATGCAGGGAACTGGAGGAGGTAAAGTATGCGGATGGAAATGGAT
GCCACAACTCGGTGAAGATAGGGTTAATAATAGAGCACAGGGAGCCGGCC
AGGGATTGGGTGTCTGCGACGGCTAGGGGGGCTTCTACAGAGGAAACGTT
TAGAGGAGGGGCAGGAACGGGAAAGTCTAGGAGGGCAAAAATAGACTTGT
ATGATAATGAGAAGGCGCGTGTGACGGTCGTGCAAGTCATGGGGGCCCAG
GCCCTTCCATGCACAAGAATGTTAAAAGTAACTCAGAAGCTGAATGAAGA
CACTAAACAACACGTTCTGCGGGGCATCCTATCCTAG back to topprotein sequence of rna1744 >rna1744-protein ID=rna1744-protein|Name=rna1744|organism=Nannochloropsis gaditana|type=polypeptide|length=680bp
MPTTLLNPPRQQVWNQSEGTTSNIPPKSRIWRKASNLSSSPSSLHPSPFA
TKHGIYSPATRVPVKPSTSSKSASTPKTGALPLSGADVSSFSIPTPPSQM
RIRTLASPPAASASSSSSAVPARPSWDSNVKNPAIYRLTPQEQARRNAAL
QSSQPRGRRDKESERSQRRETSKREALSVPTSPFAGREKAVAGPPSGSLA
ARLALGPMQGRSFPQGGGKDFSHAGACWDRKAFVHEGNGGPGERSSPQRA
FDPSLTRIRSTPDRRRENASQKCPRSLAEAAHRAKAAECLASNKYLQAEM
SAFQDRLSRTQASRSSLSDFAPRGARSAAPTRGQRPQTLGRKSLSLTQPL
SSSYSSHLPSSISSSTPKVPPRPAPRPPQPAPPHTTTARARPLSVDTPSS
LTPRDAAAFFRTLLACPPLGPLMSTAELQFLRSVSPCDASSLPPSFLLSL
AARMADRLSALQEENEVLQARLALSEVRREGLREGLREGMKEGAGTSQDP
LSTEKMANDVKQGTPLASIPFPKQPSRGIHHDNEGGTKNGELPTSGQQKP
SARAAEAINAMKKGGSVRGGREEGNDKTASLRVSWLDASVTAEENAALLT
ALEGIYPAPAIQRDRACAPAAVVLNGRGSGGPGSEGGKEASLASSPATFG
PYLGAPAPLFEELGRWMRPGSWRRTLRPQG back to topmRNA from alignment at CM002458.1:12872..15272- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1744 ID=rna1744|Name=rna1744|organism=Nannochloropsis gaditana|type=mRNA|length=2401bp|location=Sequence derived from alignment at CM002458.1:12872..15272- (Nannochloropsis gaditana)
TTTCCCCCGGCAGGAGACATCGCTTCGCTTTTTCCCTGCGGCGAGCTGCC
CTCCCTTGTGACGTTCCACTCCACGTTCAGGCCCTCTTCACATTCTGGTC
TGTTTTTTTACGTGCAAGGGGATAAAGTAAGCCGTCAAGTGATAGGACTC
AGCAGCAGGCGGTAGAGAGGACAGTATTATGCCCACAACACTCCTCAATC
CTCCCCGCCAGCAAGTGTGGAATCAGAGCGAAGGCACGACTTCCAACATC
CCACCAAAATCTCGCATTTGGCGTAAAGCCTCTAATTTATCCTCTTCTCC
TTCGAGCCTTCATCCATCCCCCTTCGCCACGAAGCACGGCATCTATTCAC
CCGCGACGCGTGTGCCTGTAAAGCCTTCCACCTCATCAAAGTCTGCTTCG
ACACCAAAAACCGGAGCTCTCCCCCTCTCCGGCGCCGACGTTTCTTCCTT
CTCCATCCCTACTCCTCCATCCCAAATGCGAATCCGTACTCTAGCATCTC
CCCCTGCCGCCTCCGCGTCTTCCTCATCTTCTGCCGTGCCAGCCCGGCCG
TCCTGGGATTCGAACGTCAAGAACCCAGCTATATATCGCCTTACCCCCCA
AGAGCAAGCCCGGCGCAACGCAGCTCTGCAGTCGTCTCAGCCCCGAGGTA
GGCGAGACAAAGAGTCAGAGCGCAGTCAGCGTCGAGAAACGTCCAAGCGA
GAGGCCCTGTCGGTGCCGACTTCTCCCTTCGCCGGGCGGGAAAAAGCCGT
GGCGGGCCCTCCTTCGGGCTCTTTGGCCGCGCGACTGGCCTTAGGACCGA
TGCAAGGTAGGAGCTTTCCCCAAGGGGGCGGAAAGGACTTCTCTCACGCG
GGAGCGTGCTGGGATCGGAAGGCATTTGTGCACGAAGGGAATGGCGGTCC
GGGGGAGAGGAGCTCACCACAACGTGCCTTCGACCCCTCCTTGACAAGAA
TTCGGTCCACTCCCGACAGACGCCGGGAAAATGCCTCTCAAAAATGTCCC
CGCAGCCTCGCTGAAGCGGCCCATCGCGCCAAAGCTGCAGAGTGCCTGGC
GTCAAACAAGTATTTGCAGGCGGAGATGTCGGCTTTCCAGGACCGTCTGT
CTCGCACGCAGGCTTCCAGGTCCTCGCTCTCTGACTTCGCGCCACGGGGG
GCCCGCTCAGCTGCCCCCACCCGTGGGCAAAGACCCCAAACCCTCGGCAG
GAAGTCTCTCTCCCTCACCCAGCCTTTATCCTCCTCCTACTCTTCCCACC
TTCCCTCTTCCATTTCCTCTTCAACTCCCAAAGTACCTCCTCGTCCTGCC
CCTCGTCCGCCTCAGCCCGCCCCTCCACACACCACTACAGCCCGGGCAAG
GCCTCTGTCTGTCGATACTCCCTCCTCCCTTACCCCTCGCGACGCAGCCG
CTTTCTTTCGCACCCTCCTGGCATGCCCGCCTCTCGGCCCCCTCATGAGC
ACAGCCGAATTGCAATTCTTGCGCTCGGTCTCGCCCTGCGACGCCTCCTC
CCTCCCGCCCTCTTTTCTCCTCTCCCTCGCTGCTCGCATGGCTGATCGTC
TCTCAGCTTTGCAAGAAGAGAACGAAGTGCTGCAAGCGCGCCTCGCACTC
TCGGAGGTCCGGAGGGAAGGACTGAGGGAGGGGCTGAGGGAGGGGATGAA
GGAGGGAGCGGGGACAAGTCAAGATCCGTTATCGACGGAGAAGATGGCCA
ACGACGTGAAGCAAGGGACCCCTCTAGCCTCCATTCCATTTCCCAAGCAA
CCATCAAGGGGGATCCACCACGACAACGAGGGAGGGACGAAAAACGGAGA
GCTCCCTACGAGCGGACAGCAAAAGCCGAGCGCGAGGGCGGCCGAGGCGA
TAAATGCCATGAAAAAGGGAGGCAGTGTCCGCGGGGGGAGGGAAGAAGGG
AACGACAAGACCGCTTCTCTGCGAGTGAGTTGGCTGGATGCAAGTGTCAC
TGCGGAGGAAAATGCGGCGCTGTTGACAGCGTTGGAGGGGATCTACCCCG
CACCGGCCATCCAGCGGGACCGTGCTTGTGCCCCGGCAGCTGTTGTTTTG
AATGGGAGGGGGTCGGGGGGCCCAGGGAGTGAAGGGGGGAAGGAAGCCTC
GCTGGCGTCCTCCCCTGCCACCTTCGGGCCCTACCTTGGCGCGCCGGCCC
CTCTTTTCGAGGAGCTGGGCAGATGGATGAGACCTGGCTCATGGCGGCGG
ACACTGAGGCCGCAAGGATGACAGGCATTGGATGGAGTGCTAGGATAGGC
TGCTCGCAGAAAAAGATATTTGAATGCGGGCCTAACGCAATATCACGGAC
ACACCGCCCCTCCCACATGCCCCGCAGAACGTGTTGTTTAGTGTCTTCAT
TCAGCTTCTGAGTTACTTTTAACATTCTTGTGCATGGAAGGGCCTGGGCC
C back to topCoding sequence (CDS) from alignment at CM002458.1:12872..15272- >rna1744 ID=rna1744|Name=rna1744|organism=Nannochloropsis gaditana|type=CDS|length=2043bp|location=Sequence derived from alignment at CM002458.1:12872..15272- (Nannochloropsis gaditana)
ATGCCCACAACACTCCTCAATCCTCCCCGCCAGCAAGTGTGGAATCAGAG
CGAAGGCACGACTTCCAACATCCCACCAAAATCTCGCATTTGGCGTAAAG
CCTCTAATTTATCCTCTTCTCCTTCGAGCCTTCATCCATCCCCCTTCGCC
ACGAAGCACGGCATCTATTCACCCGCGACGCGTGTGCCTGTAAAGCCTTC
CACCTCATCAAAGTCTGCTTCGACACCAAAAACCGGAGCTCTCCCCCTCT
CCGGCGCCGACGTTTCTTCCTTCTCCATCCCTACTCCTCCATCCCAAATG
CGAATCCGTACTCTAGCATCTCCCCCTGCCGCCTCCGCGTCTTCCTCATC
TTCTGCCGTGCCAGCCCGGCCGTCCTGGGATTCGAACGTCAAGAACCCAG
CTATATATCGCCTTACCCCCCAAGAGCAAGCCCGGCGCAACGCAGCTCTG
CAGTCGTCTCAGCCCCGAGGTAGGCGAGACAAAGAGTCAGAGCGCAGTCA
GCGTCGAGAAACGTCCAAGCGAGAGGCCCTGTCGGTGCCGACTTCTCCCT
TCGCCGGGCGGGAAAAAGCCGTGGCGGGCCCTCCTTCGGGCTCTTTGGCC
GCGCGACTGGCCTTAGGACCGATGCAAGGTAGGAGCTTTCCCCAAGGGGG
CGGAAAGGACTTCTCTCACGCGGGAGCGTGCTGGGATCGGAAGGCATTTG
TGCACGAAGGGAATGGCGGTCCGGGGGAGAGGAGCTCACCACAACGTGCC
TTCGACCCCTCCTTGACAAGAATTCGGTCCACTCCCGACAGACGCCGGGA
AAATGCCTCTCAAAAATGTCCCCGCAGCCTCGCTGAAGCGGCCCATCGCG
CCAAAGCTGCAGAGTGCCTGGCGTCAAACAAGTATTTGCAGGCGGAGATG
TCGGCTTTCCAGGACCGTCTGTCTCGCACGCAGGCTTCCAGGTCCTCGCT
CTCTGACTTCGCGCCACGGGGGGCCCGCTCAGCTGCCCCCACCCGTGGGC
AAAGACCCCAAACCCTCGGCAGGAAGTCTCTCTCCCTCACCCAGCCTTTA
TCCTCCTCCTACTCTTCCCACCTTCCCTCTTCCATTTCCTCTTCAACTCC
CAAAGTACCTCCTCGTCCTGCCCCTCGTCCGCCTCAGCCCGCCCCTCCAC
ACACCACTACAGCCCGGGCAAGGCCTCTGTCTGTCGATACTCCCTCCTCC
CTTACCCCTCGCGACGCAGCCGCTTTCTTTCGCACCCTCCTGGCATGCCC
GCCTCTCGGCCCCCTCATGAGCACAGCCGAATTGCAATTCTTGCGCTCGG
TCTCGCCCTGCGACGCCTCCTCCCTCCCGCCCTCTTTTCTCCTCTCCCTC
GCTGCTCGCATGGCTGATCGTCTCTCAGCTTTGCAAGAAGAGAACGAAGT
GCTGCAAGCGCGCCTCGCACTCTCGGAGGTCCGGAGGGAAGGACTGAGGG
AGGGGCTGAGGGAGGGGATGAAGGAGGGAGCGGGGACAAGTCAAGATCCG
TTATCGACGGAGAAGATGGCCAACGACGTGAAGCAAGGGACCCCTCTAGC
CTCCATTCCATTTCCCAAGCAACCATCAAGGGGGATCCACCACGACAACG
AGGGAGGGACGAAAAACGGAGAGCTCCCTACGAGCGGACAGCAAAAGCCG
AGCGCGAGGGCGGCCGAGGCGATAAATGCCATGAAAAAGGGAGGCAGTGT
CCGCGGGGGGAGGGAAGAAGGGAACGACAAGACCGCTTCTCTGCGAGTGA
GTTGGCTGGATGCAAGTGTCACTGCGGAGGAAAATGCGGCGCTGTTGACA
GCGTTGGAGGGGATCTACCCCGCACCGGCCATCCAGCGGGACCGTGCTTG
TGCCCCGGCAGCTGTTGTTTTGAATGGGAGGGGGTCGGGGGGCCCAGGGA
GTGAAGGGGGGAAGGAAGCCTCGCTGGCGTCCTCCCCTGCCACCTTCGGG
CCCTACCTTGGCGCGCCGGCCCCTCTTTTCGAGGAGCTGGGCAGATGGAT
GAGACCTGGCTCATGGCGGCGGACACTGAGGCCGCAAGGATGA back to top
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