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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100347g3.10704.mrna |
| Orig protein id | gnl|cribi|Naga_100347g3.10704 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1368079..1370215 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1735 ID=rna1735|Name=rna1735|organism=Nannochloropsis gaditana|type=mRNA|length=1612bp
AAGTCAGTGGCACTCGCTCATCATCATTTAATGCAATTTATCCCATAACA
TAGGTCGATATCGAATTTTAGCGCTGTACCTTTGGGATGGAACCCAGTAA
AAACGAGCGTCCGACCTCTTCGTCTTCCTTCCTCCCTGCTTTATCTCCGA
ACTCCTCTTCACACAACCCCATCACGACAATTCAAGACTTCCATGTCTTA
TCTAAGCTCGGATTAGGAGCTTATGGAAGCGTTTATCAAGTTATACGTAA
AGCAGACAATCATACGTACGCAATTAAGCGCGTGAACCTAGAAGGGCTCG
ATCAGCGAGACCTTGCCATGGCCCTCAATGAAATCCGTCTTTTGTCCTCT
TTCCGGCATCCGCGGATTATCCGCTGCTATGAAACTTTTCTTGACGGTCC
TACACATTTGTGCATTGTCATGGAGTACTGCGGATTCCAGGACCTGGCCC
GTAAGATCCAGCGGTATCGAGCAAGGGGCGAGAGGGTGGACGAGCGAGTG
GTTTGGGTATACTTGGTGCAGTGCTTGGAGGCACTGTCCGCGCTGCATGC
TCTCCGTGTCCTCCATCGTGACATTAAACCAGCGAATATATTGCTCGATA
AGGAGGGGAATGCCAAATTGGGGGACCTTAACGTCTCCAAATGCCTCGAC
GACGAGACAGGTGAGATCCACGCCGTCTGGGGCACACTTCCCTACATGGC
GCCCGAAATTTGGGAGGGAAAACCTTACGGCTTTGCATCCGATTTGTATT
CTCTTGGCTGCACACTTTTTGAGCTCACGAAGCTGGTGCCCCCCTTCGAC
GGTCCCACTCCCCTGCATTTGCGCCGGGCGGTTTTGAAGCGTCAGTTTCA
GTCCGACCTGGCAACGGACACGGTCTACTCGCACGACCTCCGCCACGTGA
TCCTCTCCCGCCTCCTCCATCACGATCCCGCCCAGCGTCTGACAGCTGAC
TCCCTCATGCAGCTCCCGGAGGTCGCCTCCCGCCTTGAGCTGGTGCGGCA
CAAGCTGCCGACGGACTTACCGGCCGCCCTCCCCCTCACTCCCTCCTCCC
TCCTGCTCAAGCATCTCAACACGCCCATTGCCAGAAATAGCAGCGAAGTA
AGGGAGGAAGGGAAGTCGCTGGAGGGATCCCCTGTGCAGCTGGAGGAAGG
CGGCGCTGATACCACCAGGGGTAGCACCAATGAGGAGGCTCAGGGCAGTG
CCTCACTCACCCTCGGTGCCCTGCCCTCCCTCTTGCCCACTCTCCTGCCT
GGGCCCTCTTACCCCCCATTGTCTTCAGCCCAAGCACTCTCGCCGTCTGC
CTCCCTTCCTGTGTCCTCGTCTGCGCCAGAAAGGAGCCGTGAGACCGCAC
ACGACCACCCCCGCCAGGCTTGCCCCCTCCCCCCTCCCTTTCCCTTCCCG
CTCCTGTGGACCGGCAGGACTCTTTGACTGCCCTGCTACGCTCGCCCTTC
GCCCCTCCTCTCCCGACGTTCCGGCCTATGCCGCCGCTCGATGAAAAGAG
CAAGGTGGAGGGCCTGGTATCGATCGGCGCAGGGAGAGGGGGCAGGGAGG
GCAGCGGCGAGGACCCGAGACTGGGTCGGCACACAATCTCCTCCCCCGTC
TCGTCCTTGTCC back to topprotein sequence of rna1735 >rna1735-protein ID=rna1735-protein|Name=rna1735|organism=Nannochloropsis gaditana|type=polypeptide|length=240bp
MGATSKLVLALAIVSCTLFPIGAFCPMVERLPSKRVSALVFMSSSTSSDI
APSAAARGISSRRDSLVRVATTASALVFLSPFRHPVSAAVKASSTEEAQK
AAREIKVALRSMADMQDAASKAEWETVKDLLERLEFKNFENTATTLVRSD
LLTAEDKTSLGTIRRFGLTADFIITLGGLESELRAGGVLPPLKGAIVEED
DEGGEKGVNRREALKFVKLARGALQEIDRITSSVLPEAEQ back to topmRNA from alignment at CM002457.1:1368079..1370215+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1735 ID=rna1735|Name=rna1735|organism=Nannochloropsis gaditana|type=mRNA|length=2137bp|location=Sequence derived from alignment at CM002457.1:1368079..1370215+ (Nannochloropsis gaditana)
GCTCAAGGCGGGAGGCGACCTCCGGGAGCTGCATGAGGGAGTCAGCTGTC
AGACGCTGGGCGGGatcgtgatggaggaggcgggagaggatcACGTGGCG
GAGGTCGTGCGAGTAGACCGTGTCCGTTGCCAGGTCGGACTGAAACTGAC
GCTTCAAAACCGCCCGGCGCAAATGCAGGGGAGTGGGACCGTCGAAGGGG
GGCACCAGCTTCGTGAGCTCAAAAAGTGTGCAGCCAAGAGAATACAAATC
GGATGCAAAGCCGTAaggttttccctcccaaaTTTCGGGCGCCATGTAGG
GAAGTGTGCCCCAGACGGCGTGGATCTCACCTGTCTCGTCGTCGAGGCAT
TTGGAGACGTTAAGGTCCCCCAATTTGGCATTCCCCTCCTTATCGAGCAA
TATATTCGCTGGTTTAATGTCACGATGGAGGACACGGAGAGCATGCAGCG
CGGACAGTGCCTCCAAGCACTGCACCAAGTATACCCAAACCACTCGCTCG
TccaccctctcgcccctTGCTCGATACCGCTGGATCTTACGGGCCAGGTC
CTGGAATCCGCAGTACTCCATGACAATGCACAAATGTGTAGGACCGTCAA
GAAAAGTTTCATAGCAGCGGATAATCCGCGGATGCcggaaagaggacaaa
agACGGATTTCATTGAGGGCCATGGCAAGGTCTCGCTGATCGAGCCCTTC
TAGGTTCACGCGCTTAATTGCGTACGTATGATTGTCTGCTTTACGTATAA
CTTGATAAACGCTTCCATAAGCTCCTAATCCGAGCTTAGATAAGACATGG
AAGTCTTGAATTGTCGTGATGGGGTTGTGTGAAGAGGAGTTCGGAGAtaa
agcagggaggaaggaagacgaagaggtCGGACGCTCGTTTTTACTGGGTT
CCATCCCAAAGGTACAGCGCTAAAATTCGATATCGACCTATGTTATGGGA
TAAATTGCATTAAATGATGATGAGCGAGTGCCACTGACTTGCTTCGCGTC
AATGCAAGtcgggtggaaagggaggaagcagcggaTCGATTTCAAGACGT
TGGGGCAACGGCTGGCGTGACGTACCTCGTTCGGGTCATAAACCCTGAGA
TGACAGCGACACGGGAAGCCTTGGCTTGAGAAGCACGCAGCGCATTGAGA
TGCATCCATATCTCTCCGCTGAGTGATCGTGCTGCATCTCGCATATCTTT
AAACTTACCACAAGCACCCTTATTGCATCAAGAAGTAGGACAGCAATTTT
TGGGTCGGACCTGAGGCAATACGGGGAGGCAACGCGTGTTTGATTCAGCA
GCAAGTATGGGAGCTACATCGAAGCTCGTGCTTGCTCTCGCCATTGTCTC
TTGTACGCTCTTTCCTATTGGTGCCTTCTGCCCGATGGTTGAGCGATTGC
CGTCGAAGCGGGTGTCCGCGTTAGTGTTCATGTCTtcgtctacctcctct
gACATCGCTCCGTCCGCTGCGGCCCGTGGAATCTCCTCCCGTCGTGATTC
CCTCGTTCGTGTCGCCACGACTGCGTCTGCTTTggtcttcctttctcctt
tcagACATCCAGTATCCGCGGCAGTCAAGGCGTCATCAACCGAGGAAGCA
CAGAAGGCCGCGCGCGAGATCAAAGTCGCTTTGCGCAGCATGGCAGATAT
GCAAGACGCCGCTAGCAAGGCAGAGTGGGAGACAGTCAAAGACCTCCTGG
AAAGGCTAGAATTCAAGAATTTCGAGAATACTGCCACGACTTTGGTGCGC
TCCGACTTACTAACAGCAGAGGATAAGACAAGCTTAGGGACGATCCGCCG
CTTCGGGCTAACTGCCGATTTCATCATCACCTTAGGAGGGCTTGAATCTG
AGCTGCGAGCAGGAGGTGTACTCCCTCCATTAAAAGGAGCCATagtcgaa
gaggacgacgaaggtggggagaaaggcgtgAACAGACGGGAAGCATTGAA
ATTCGTGAAGTTGGCACGAGGTGCATTACAGGAAATCGATCGAATCACAA
GCAGTGTTTTGCCCGAGGCAGAGCAATGAATTGTAAGCAACGCGAGTCAA
GGCACCTAATAAGCCCGAACTACTTTTATGCTCTTTAAAAGTTTCATGTA
CCATTCTGTTACTTCGGGTCACCTGTGATCTTTCTCC back to topCoding sequence (CDS) from alignment at CM002457.1:1368079..1370215+ >rna1735 ID=rna1735|Name=rna1735|organism=Nannochloropsis gaditana|type=CDS|length=723bp|location=Sequence derived from alignment at CM002457.1:1368079..1370215+ (Nannochloropsis gaditana)
ATGGGAGCTACATCGAAGCTCGTGCTTGCTCTCGCCATTGTCTCTTGTAC
GCTCTTTCCTATTGGTGCCTTCTGCCCGATGGTTGAGCGATTGCCGTCGA
AGCGGGTGTCCGCGTTAGTGTTCATGTCTtcgtctacctcctctgACATC
GCTCCGTCCGCTGCGGCCCGTGGAATCTCCTCCCGTCGTGATTCCCTCGT
TCGTGTCGCCACGACTGCGTCTGCTTTggtcttcctttctcctttcagAC
ATCCAGTATCCGCGGCAGTCAAGGCGTCATCAACCGAGGAAGCACAGAAG
GCCGCGCGCGAGATCAAAGTCGCTTTGCGCAGCATGGCAGATATGCAAGA
CGCCGCTAGCAAGGCAGAGTGGGAGACAGTCAAAGACCTCCTGGAAAGGC
TAGAATTCAAGAATTTCGAGAATACTGCCACGACTTTGGTGCGCTCCGAC
TTACTAACAGCAGAGGATAAGACAAGCTTAGGGACGATCCGCCGCTTCGG
GCTAACTGCCGATTTCATCATCACCTTAGGAGGGCTTGAATCTGAGCTGC
GAGCAGGAGGTGTACTCCCTCCATTAAAAGGAGCCATagtcgaagaggac
gacgaaggtggggagaaaggcgtgAACAGACGGGAAGCATTGAAATTCGT
GAAGTTGGCACGAGGTGCATTACAGGAAATCGATCGAATCACAAGCAGTG
TTTTGCCCGAGGCAGAGCAATGA back to top
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