rna1725, rna1725 (mRNA) Nannochloropsis gaditana

Overview
Namerna1725
Unique Namerna1725
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length749
Alignment locationCM002457.1:1341815..1342991 -

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100770g1.1326.mrna
Orig protein idgnl|cribi|Naga_100770g1.1326
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1341815..1342991 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100770g1gene1659Nannochloropsis gaditana (N. gaditana B-31)gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM28952.1cds1721Nannochloropsis gaditana (N. gaditana B-31)CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1725rna1725-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1725 ID=rna1725|Name=rna1725|organism=Nannochloropsis gaditana|type=mRNA|length=749bp
CCTCCCTCCTTCCCTCCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CAGACACGAACCTGCAGTTGCCCGCCGGAGACTTCATGTGCCTCTTCCTC
GTGGGCGCGGCCCTTGGTCGGCTCTTCGGGCATGGCTTCCAAGCCATCTT
CCCGAGGGTAGGGGGGAGGGAGGGGCCGAGGGAGGGAGGGAGGGAGGGGT
TGGACATTTGTCGCCACGCCGGCGTTTGACGGGAGCTCGCAGAGAGGCTT
CCTCGCCTAGAGCTCGACCTCCCCCACTGGCTTTGAAAAAGTCTTTGGCT
CCCGTTCCTGTTCCTGTTCCTTCCCCTTCTCCCTCCCTCCTTCCTTCTCT
CCGACGCTCTCACAACAACGCTGTCAATTGTCGTGTACAGGGCGATGTAT
CCCGACGGTCCCTTTGTAATTCCCCTTCCCCCGGTCACTCTGCAACCTTT
ATTCTCACCTCTCTGCTTGCTCCCTCCCCCTCCCTCCCTTCCTCCCGCCC
TCCTTCCCGCCCTCCCGCCCTCCCTCCCTCAGCATTTGAATTCCGAGTCG
CCTCCTTTGCCCTGTGTGGGGGCAGCAGCCTTGGCAGGAGCCTCCACGCA
TACTATCTCCAGCGGCGTCATCGCCCTTGAGCTGACAGGCGAGTACCACC
AACAGCTCCCGATTTTCCTGAGCGTCCTGGCGGCATACACGATGTCCCGC
GGCCTCTCTCAGTCCATCTACGACGCCTTGATCCTGGTCTGTTCCCTCC
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protein sequence of rna1725

>rna1725-protein ID=rna1725-protein|Name=rna1725|organism=Nannochloropsis gaditana|type=polypeptide|length=164bp
MFSGRGRNGSRIPPQRPPQHSSDDIEANDSGKEYEEDPVNIIPFSSAYNR
SEDDECRNRPQAAPSSNTRGAPPTASAPAHQGNLVDASHAATAAGPPPRS
RHDAVQDDERPASAFSPQARLEEEEGKAGPTAWPDPLPPPAPPPPVPRAL
FPLPPPCQTTDLRR
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mRNA from alignment at CM002457.1:1341815..1342991-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1725 ID=rna1725|Name=rna1725|organism=Nannochloropsis gaditana|type=mRNA|length=1177bp|location=Sequence derived from alignment at CM002457.1:1341815..1342991- (Nannochloropsis gaditana)
AACAGCAACTCACGAACGTACGAACTCGGTTTAACTGGTGCAGGCACTTC
TACATGTCATTGGAAGGCAAAAATTAAATCATTTGAGCCATGTTCAGCGG
CAGAGGCCGGAACGGGAGTCGAATACCGCCGCAGCGACCTCCTCAACATT
CCTCGGATGATATCGAGGCAAACGACTCAGGAAAAGAATATGAAGAAGAT
CCGGTGAACATCATTCCCTTTTCCTCTGCATACAATCGGAGCGAGGACGA
CGAATGCCGGAATCGCCCCCAAGCTGCGCCCTCCTCCAACACCCGCGGGG
CGCCCCCAACAGCCTCTGCGCCCGCGCATCAGGGCAACTTGGTCGACGCC
TCTCATGCGGCAACTGCGGCAGGACCCCCACCAAGAAGCCGGCATGACGC
AGTACAGGACGATGAGCGCCCTGCCTCGGCCTTCAGTCCCCAAGCGCGGC
TCGAAGAAGAGGAAGGCAAAGCTGGGCCTACCGCGTGGCCCGATCCCCTC
CCTCCCCCCGCCCCTCCCCCGCCGGTCCCTCGCGCTCTCTTTCCTCTGCC
TCCTCCTTGTCAAACCACCGACCTACGACGATAGGCTCCCATCGGGACGC
GACCCGGGAATGGCACCACCCTCTCCCCTACCACCATCCCGGCCACCTAC
CCCCACCTCATCCGTCCCGCCCTCCGCATCTCCGAATCGGGGAAACGTCT
GCCGTTCCTCACGCTTCTCACTCCCGCGCACACGCACACTCATCCCCAAC
CATGGTGGCGCCCGTCCCGTCGCGCGCCTGCCCTGCCGCTGACGCGCACT
TGCATCCCTACAGCCATTCCGCCTCGACCCATCATCACCGACCCAGCCCT
GGTCGTTCCCTCTCCTCCTCCTCCTCCTCCTCCTCCCTCCACGCCGGCCA
CCGCCCTCCGTCCTCCTCGCACGCCAGCACGCCTACCTACCCCCACCGCC
ACTTCACCCCCTCCCCGACCCCGGACACGATCGGCGGCAGCTGCACCGCC
CACCTCCATCCTCCTCACTCTTCTCATTCGGCCTACCACTCCCATCCTAC
CGCCCCTCCCTCCGTCCTCAACCCCGGCTCCTACCGTCTTTCCACCCCCT
CCTCGCCCATCCCTCCTTCCATCACGCCCTCGCACTTTTCTCCTCCTCAG
CCGCCCTCCCGAAGGCAAGGGGAGGCA
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Coding sequence (CDS) from alignment at CM002457.1:1341815..1342991-

>rna1725 ID=rna1725|Name=rna1725|organism=Nannochloropsis gaditana|type=CDS|length=495bp|location=Sequence derived from alignment at CM002457.1:1341815..1342991- (Nannochloropsis gaditana)
ATGTTCAGCGGCAGAGGCCGGAACGGGAGTCGAATACCGCCGCAGCGACC
TCCTCAACATTCCTCGGATGATATCGAGGCAAACGACTCAGGAAAAGAAT
ATGAAGAAGATCCGGTGAACATCATTCCCTTTTCCTCTGCATACAATCGG
AGCGAGGACGACGAATGCCGGAATCGCCCCCAAGCTGCGCCCTCCTCCAA
CACCCGCGGGGCGCCCCCAACAGCCTCTGCGCCCGCGCATCAGGGCAACT
TGGTCGACGCCTCTCATGCGGCAACTGCGGCAGGACCCCCACCAAGAAGC
CGGCATGACGCAGTACAGGACGATGAGCGCCCTGCCTCGGCCTTCAGTCC
CCAAGCGCGGCTCGAAGAAGAGGAAGGCAAAGCTGGGCCTACCGCGTGGC
CCGATCCCCTCCCTCCCCCCGCCCCTCCCCCGCCGGTCCCTCGCGCTCTC
TTTCCTCTGCCTCCTCCTTGTCAAACCACCGACCTACGACGATAG
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Synonyms
Publications