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Properties
| Property Name | Value |
|---|
| Product | acyl- :lysophosphatidylglycerol acyltransferase 1 |
| Orig transcript id | gnl|cribi|Naga_100501g5.4121.mrna |
| Orig protein id | gnl|cribi|Naga_100501g5.4121 |
| Gene | LGAT1 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1264269..1265498 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1690 ID=rna1690|Name=rna1690|organism=Nannochloropsis gaditana|type=mRNA|length=1238bp
CAGGACAAAGGAAATTGACACCGGCATGTGCGCCTTCTGTGTATAATATG
GAGAATTTCCATCGACAAGTGTTGTGCGTGAAGGCCTCGAAGGGAAGAAG
AGGACACCTGGCCGCTGCAGTGACGCGTAAAAAGTCGATCTTTCGCGTGT
CACACGGCAAACACCCTTTTCTTATCAAATGACACCCTGAGACGTCGCCT
CGCCCTTTTTTTGCGGTGTTATGTGAGATGTTGGTCAAACGGAATGCCAA
CGTTTGTTCTTTCATCCACATTCTTACTTGGCTTTGACCTGGTGTTCGTT
CCGACTCGCACACATTTCCAGAGCAGGAGGGACACCGTGCTTCGTCTATC
AAATTTCCTTCCTTGCTTGCCCCCCCTTGAGAGATATCTTCTTCGTCTCT
TCTCCCTCTAAATTCCCTCCATAGCCATCAGCTTATGATTGCACCGCGGC
CATCGCTTTCCGTCGCCGTCCTCCTCCTGTTGCTCCTCCCTCTCCTCCTC
CCCACCGTCCTCCTGGGCGCTTCTACCGATAAACCCCAGGGACATAACGG
TCTTGTCAAGCCTTTCAAGCCTGGACCGCCGAGCATCCGCCTCAAGAAAA
GCGAGGTCGAGAAACTTCGAAAAGGCGAGGCCGTGAAACAGCAGCTGTCC
TCCGGATCGGGGGGGCGGGGCCTGGTGATTCAAGACGTAGAAGCCCCTCC
CGAGGTTGTCTGGGGCAGAATCATGGACTTCCCTGCCTACACCCGCATGG
TTCCACGCGTCAGTCTCTGCGAGAATTACAGGGTTCAAGAGAATTACCTG
CAGGGCCTGAAGGAGATATTCACCCGGATGCGCCTGACTGTGATGGGCTT
CAATGTCGAGTATTTCATCCACCATAAATATTTCCCGAAATTGAACACGG
TGGTGTGGACGCTTGACTACAACCGAGAGAGCGACCTGGACGACTCAGTG
GGCTATTGGCACGTGATTCCCCATCCTGACCCCGACAGAGAACATTGGTC
GCGCGTGTACTATTCCATAGACATGCGGCTCAAGTCCTGGATGCCTTCCT
TCGTGAAGAACGTCTTGAAGAATCAGGTGGGCCGGGCAGGAGGAACGGAA
AAGAGGGAGGGAGGGAGGAAAGGAGAGAGGGAGAGATAGGGGGAGGCTCA
AAAAGAGGAGAGATGGGTACACGGGCCTTCGATTCATGGGGACCCCTGCC
GGGTATCTTCATCCTCATTCCTCTCCCGCCTCCCTCCC back to topprotein sequence of rna1690 >rna1690-protein ID=rna1690-protein|Name=rna1690|organism=Nannochloropsis gaditana|type=polypeptide|length=409bp
MSTSLSAPPPTRESGHVGSRPNSTSQEKKEGSKRSYAKEVSDSLWVDALA
YLLAIVILLNFWSAAFLELVMYVVFYPLCPSIWYVTRILGVRFGWLFPML
CLKWSNVRIRMTGKGAAATSLGAIPPSPFSFSSSWQRYRDLLTPGKLPRA
LIMINHLSWADTFVLSPWLHAHNSVNGDTCWPMWKGFMQMPLGWIAYMSE
CPVLGYGKEVDLKTIHRSVTRFFERRMTKFFLFPEGAVFREEMRSKSHQY
ATANKLPLLDHCLLPKHGAFYRAGKELHRQGMTTLVDLTLAYPPASSLYD
APFNVLDLVKRHAKPLYLPLHVRTFAMSEVPWDEEGKVQDWLNQRFMEKD
KMLEEYYQNNGGALVEGAVEEGSRWQDLLMDLCVWIVLQAVMYGALLYLG
RRMLGYGPV back to topmRNA from alignment at CM002457.1:1264269..1265498+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1690 ID=rna1690|Name=rna1690|organism=Nannochloropsis gaditana|type=mRNA|length=1230bp|location=Sequence derived from alignment at CM002457.1:1264269..1265498+ (Nannochloropsis gaditana)
ATGAGCACGTCTCTttcagcccctcctccaaccagGGAGAGTGGGCATGT
GGGTTCCCGCCCTAATTCGACAAgccaggaaaagaaggaaggaagcaagc
gTAGCTATGCAAAGGAAGTCTCAGACTCCCTCTGGGTGGATGCATTGGCA
TATTTACTTGccatcgtcatcctcctcaattTCTGGTCGGCAGCGTTTTT
GGAACTGGTTATGTACGTCGTCTTCTATCCGCTGTGTCCATCGATCTGGT
ACGTGACACGCATTTTGGGCGTGAGATTCGGCTGGCTTTTCCCCATGCTG
TGCCTGAAGTGGTCCAACGTGCGCATCCGCATGACGGGCAAGGGAGCCGC
AGCCACCTCCTTGGGagcaatccctccctcccccttctccttctcctcct
cttggcaaCGCTACCGAGACCTCTTGACGCCAGGGAAGCTGCCCAGGGCC
TTAATCATGATCAATCACTTGTCCTGGGCGGATACctttgtcctttcccc
ctggcTCCACGCCCACAACAGCGTGAACGGAGACACTTGCTGGCCTATGT
GGAAAGGGTTCATGCAGATGCCCTTGGGGTGGATCGCATACATGTCCGAA
TGCCCCGTATTGGGGTACGGGAAAGAAGTGGATTTGAAAACGATTCACAG
GAGCGTGACACGATTTTTCGAACGGCGGATGACCAaatttttcctcttcc
cggaGGGCGCCGTGTTCAGAGAAGAAATGCGGTCGAAGTCACATCAATAC
GCGACTGCCAACAAGCTCCCTTTGCTGGATCATTGCCTTCTCCCAAAGCA
CGGTGCCTTTTaccgggcgggaaaggaactGCACCGGCAAGGAATGACGA
CCCTGGTGGACCTGACCCTGGCCTACccccctgcgtcctccctgtaCGAC
GCTCCCTTCAACGTCCTTGACCTGGTCAAACGGCACGCAAAGCCCCTGTA
CCTCCCCCTGCATGTCCGCACTTTTGCCATGTCGGAGGTGCcctgggacg
aggaagggaaggtgcaGGATTGGCTGAACCAACGCTTTATGGAGAAAGAC
AAAATGTTGGAGGAGTATTACCAGAACAACGGAggggccttggtggaggg
TGCGGTAGAAGAAGGCTCGCGCTGGCAAGACCTGTTGATGGATCTCTGTG
TGTGGATTGTCCTTCAGGCGGTCATGTACGGAGCTCTGTTGTACCTTGGG
AGAAGAATGCTGGGATATGGGCCGGTGTGA back to topCoding sequence (CDS) from alignment at CM002457.1:1264269..1265498+ >rna1690 ID=rna1690|Name=rna1690|organism=Nannochloropsis gaditana|type=CDS|length=1230bp|location=Sequence derived from alignment at CM002457.1:1264269..1265498+ (Nannochloropsis gaditana)
ATGAGCACGTCTCTttcagcccctcctccaaccagGGAGAGTGGGCATGT
GGGTTCCCGCCCTAATTCGACAAgccaggaaaagaaggaaggaagcaagc
gTAGCTATGCAAAGGAAGTCTCAGACTCCCTCTGGGTGGATGCATTGGCA
TATTTACTTGccatcgtcatcctcctcaattTCTGGTCGGCAGCGTTTTT
GGAACTGGTTATGTACGTCGTCTTCTATCCGCTGTGTCCATCGATCTGGT
ACGTGACACGCATTTTGGGCGTGAGATTCGGCTGGCTTTTCCCCATGCTG
TGCCTGAAGTGGTCCAACGTGCGCATCCGCATGACGGGCAAGGGAGCCGC
AGCCACCTCCTTGGGagcaatccctccctcccccttctccttctcctcct
cttggcaaCGCTACCGAGACCTCTTGACGCCAGGGAAGCTGCCCAGGGCC
TTAATCATGATCAATCACTTGTCCTGGGCGGATACctttgtcctttcccc
ctggcTCCACGCCCACAACAGCGTGAACGGAGACACTTGCTGGCCTATGT
GGAAAGGGTTCATGCAGATGCCCTTGGGGTGGATCGCATACATGTCCGAA
TGCCCCGTATTGGGGTACGGGAAAGAAGTGGATTTGAAAACGATTCACAG
GAGCGTGACACGATTTTTCGAACGGCGGATGACCAaatttttcctcttcc
cggaGGGCGCCGTGTTCAGAGAAGAAATGCGGTCGAAGTCACATCAATAC
GCGACTGCCAACAAGCTCCCTTTGCTGGATCATTGCCTTCTCCCAAAGCA
CGGTGCCTTTTaccgggcgggaaaggaactGCACCGGCAAGGAATGACGA
CCCTGGTGGACCTGACCCTGGCCTACccccctgcgtcctccctgtaCGAC
GCTCCCTTCAACGTCCTTGACCTGGTCAAACGGCACGCAAAGCCCCTGTA
CCTCCCCCTGCATGTCCGCACTTTTGCCATGTCGGAGGTGCcctgggacg
aggaagggaaggtgcaGGATTGGCTGAACCAACGCTTTATGGAGAAAGAC
AAAATGTTGGAGGAGTATTACCAGAACAACGGAggggccttggtggaggg
TGCGGTAGAAGAAGGCTCGCGCTGGCAAGACCTGTTGATGGATCTCTGTG
TGTGGATTGTCCTTCAGGCGGTCATGTACGGAGCTCTGTTGTACCTTGGG
AGAAGAATGCTGGGATATGGGCCGGTGTGA back to top
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