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Properties
| Property Name | Value |
|---|
| Product | Fatty acid desaturase type 2 |
| Orig transcript id | gnl|cribi|Naga_100013g52.9764.mrna |
| Orig protein id | gnl|cribi|Naga_100013g52.9764 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002455.1 | supercontig | CM002455.1:436228..439687 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna167 ID=rna167|Name=rna167|organism=Nannochloropsis gaditana|type=mRNA|length=1910bp
ACACCATTCCCAACCGCCCACGCATTTCACAACGAAAGGTGCACAATCAG
GTAAACAGGGCCAAAGGGCGGCTTCATTGCAAGAAGCTTGCCACCATTTG
GGACCCTATCACCATGACCCATCATCCCCATTCAAGTGCCAGACAGCGGA
ACATCGTTCTCAAAGTCTTGGCGTTTTCCTCTTTCGGTTGCCTTGTATTA
CCCTACATTCTTGGTTTTCATCTCGATCTGTACGATGACCAATTGAAAGC
CATTTGGAGAAAACGCTTGGCGCACCAACTATCGGCAACGGAGGCGGACA
CTGAAAATGGCATAAGTGTGGAGAGCAAGGCCAGCAGCAATGCCCAAATT
GATTATGAAGTATCATTCCCGGAAATCGACGCCGAGGATAGAATCATCAT
TCAATTTTCGACTGACTGCACAAGTTTTCAGCATTGGCAGGCGATGACAA
TGTTGGAGAGCGCGGAGCGTGTAGGCCAGCGTGGCGCAATCGTCAGGGTG
GTGTGTGGATGCGAAAAAAAAGCTTCATTGACAGGGGGCGACCAACTGAC
AAAAGAACAGATACAAGCGGAACATGCAGCGTTTGCCGAGCATCCAAGCT
CGACGCCTCGCTTTCGATTCCATTTGATATTCGTGGACGACATGACCCAT
GTGGCCAACACATCCGAAAGGTACAAATTTGCCAACAAAGCGCAAAGCTT
ACATTTTTGGCTGGATAAAATGGGCGGAGGAACACTTCGAGAAGTGGCTG
GACCTGATGCATCTTTCGATGAGAGCGATGAAGATGTGGTCGTCATTTCA
ATTGACCCCGATTTCCTCTTCATGACGCCATTTGGGCCGCGGGAGCTAGG
ACTGCTGCCGAGTGCTTCTTGGGGAACGAATTCTGTCAGTGAAGCCCCAA
AACTTCGTCAAACAAACTTAAGCGACGAAATTCTTTTTCGGGTTCCGAAA
AGTGGTCGCGAGGTGATTGCTCAAATGCGGGGGCGGCCGACCGCCCAAGC
CTACTCGTTGAGCTCCGTGTGGAGGGAGCTTCCGGTCTGTAAGGAGGACA
CGGACGGCTGCAGTCGAGTAAGTTTCGCTGAGGCAAACCAATTTTACAAT
GTGGGACCGCCGTATGCTTTGCATCGCGCGGACTGGCTCCCTTTCATTGA
CGAATGGACTGCTGTTATCCCTCTTGCGCACGCGCAGTACTCCACCGTTA
GCGAAGACAAGACTAAACATTACGCGGAGATGTTTGCCTGGGCGATTGCA
GCGGCAAAACTCCACCTACCTCACACATTACTGGATATGGCGATGGTAGG
ATGCATGCGAAATTGGCCAGCGGAGAGAATACATAAAGCAGTTTCTGCGC
TTCAAAAGAATCATGCGAAAGACCGAACATTTCGCTGTGGACTCGATTCA
CCAATCGTTGCTAACAACGTGGGACTCGCGGTCAGTAAGGACGAAAAGAC
TTCCGAGGCCGGAGTATCTGCCCCTGTTTCAGCTTCTGATCGACTTCCTG
CTTTCCTCCATTACTGCGAACAATGTCGCATGGAAGAGGAAGGGAGGGTG
TGGTGGTGGTATAAAAGGATGCTGCCTGCCGACCTCATTTTTGATTGTGG
CCCGCACTTGGTGGAGTTGCCACCGTCGGCCATGTTCGGGAGCAGCAAAG
AAGCCTTTGTCTCATGTACGTTGATAGAAATCGTCAATGCGTGCAAGCGG
CGCTTCCGGCGCTCGTCGCTCTGTCAGTCAGCAGCCAACGCAACGGAAAA
TGAGAGCCATGATGTTAAGATTATTCCGAAGGGGGGTCATCGTCGTATCC
GAGAGGGAGAGTGGCACGATGTGCCTGCGAAGTGAAATCGACATCTCGTG
GTTGCGTAAAAATGTGCTTCATACCAAATGGGAAAAAAGGAAAATATTTC
ACTCGAGACG back to topprotein sequence of rna167 >rna167-protein ID=rna167-protein|Name=rna167|organism=Nannochloropsis gaditana|type=polypeptide|length=333bp
MHVYPDKVEVITSLEPMVEGMLTKLLLPTGEKAWQPQDFVPDLTKEGWEE
EVKEFREKAATLPDETLVVLVGDMVTEEALPTYQTLLNTFEGVDDPTGTS
PSAWCKWTRGWTSEENRHGDLLNRYLYLTGRVDMRSIECTIQHLISSGFN
PKIKKDPYKGFVYTSFQERATKISHQNVARLANNAGDGNLGLICSKIAGD
ESRHEKAYQAIFKEILNRDPEGGLKSFYELMTDQITMPAVMMTDGHDPDL
FEHFSITAQKLGVYTAVDYANILDHLVEIWDIEHIGGLSGEGARYQEKLC
KLGPRYLKLAEMSLDRVKKMPKTPYSWIHGRMA back to topmRNA from alignment at CM002455.1:436228..439687- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna167 ID=rna167|Name=rna167|organism=Nannochloropsis gaditana|type=mRNA|length=3460bp|location=Sequence derived from alignment at CM002455.1:436228..439687- (Nannochloropsis gaditana)
TTTTGTCGCCCGTCTACTGGCCTCGTGGCGTGTCACACACTCGATGGCGG
CTCAGGGTTTGGGCGTCAGTGGGCTTCGACCGCTCCATGTTGCAAAAGTG
CGTATGACATGCCTTTCGCAGCAAGCGAGAAGGGCGTCGGCAGACAATCT
GGCGTCTCAGCGCGTTTTGATGAGGAACACTTGTTTATGACCCAGCCAAA
CATAGTGATATGAACCTTGTGAAGCACTTATTGTGGGATCTGTGTTGGAC
AAACTCGCTATGACTGCCAAAAGTCTCCTCCTGGGACTTGGCACCACCCC
TGCAACACACTCGAGAAAGGGAGCGGACGAAGTGGCGACTTTTTTTAAGC
AGTGACCTTTTACTTGGTCTCACAGACTTTAATTTAAGTACCACTATGTC
TGTTTGTAGTACTGAAACCTTGCGTTCATTCCTATCACCCGACAGCACCA
GAGCACGTTGCCACCTTTTCCCGTGTTCCAGTCCTTCGAATGGAGACAAG
CAACACTAGCACCAGCACTCTAGGCGCGAAAGCTTTACTCCGCGGAACAG
TAGCGGCGCTAGCCATTTCTTCTAGCCTTGCCTTTGTCGCCCCATCTCAT
CCTTTGCGCTCGACGGCCGCGGCTGCTTCGCGTGGTAAGTGGGAGGTGGA
AAGAGAAAAAGCTGTGCACATTCTGGAAGAAGTTTGCTTTGCAACCGAAA
TCCCACGCCACAGAGGGCTGATTTAGGGCACATACTTGTGTCGTGATGAG
AAATATCCGCAAAATTTTATATTTCGTCTGTGTCTCACTCTCACTCGACA
GTAACGCGCCAGCGGGCAGTAGCTGTGGAACCCCCCGCCGCTGCGCCGGC
CACCAAAGATGCCAAGCCCGATTGGGAAGCAGACTTCCGACGTAGACAGT
AAGTGAGACTTTCAGCATCGAATCTGGAGGACAACCATGGGATGGTTCAT
GATCAGGGGGTGGACGCGAACTAATTCAGCCCGCAAACACTAACCTTCGC
CATGTGTGGTGGTGGGAGGAGGCTCCACTGTGTTGAAGATTAACTGTCAC
TAAGTGTGATCAATGCGTGCACCTGTGTCATGGCTCGCTCATCATCAACC
TGCCATCAATTTTCCCACTGCGACCGCAGAGCCTCTAATGAGTTGATGCA
CGTCTACCCAGACAAAGTTGAGGTAATTACCAGCCTGGAGCCCATGGTAG
AGGGTATGCTTACCAAGCTGCTTCTTCCCACCGGAGAAAAAGCGTGGCAG
CCGCAGGACTTCGTGCCAGACCTGACGAAGGAGGGTTGGGAGGAGGAGGT
CAAGGAGTTCCGCGAAAAAGCCGCCACCCTCCCCGACGAGACTTTGGTAG
TGCTTGTCGGAGACATGGTGACGGAGGAAGCCCTACCAACTTACCAGACC
TTGTTGAACACCTTCGAGGGCGTCGACGATCCTACTGGCACCTCACCATC
GGCTTGGTGCAAGTGGACCCGGGGTTGGACCTCGGAAGAGAACCGCCATG
GTGACTTGCTGAACAGATACCTGTATTTGACGGGGCGAGTGGACATGCGC
TCTATTGAGTGCACCATCCAGCACCTTGTAAGTGTCCGTGAAGAGATGAG
GATGAGGGAAAGCGCGTAGCGTACGCAGTGAAAGGTTGCAATTGCATGGG
AGGAGAGCCCAAAGGACTCAAAACGAAAGTCTTGCGTAAGCGGGAAGATA
GTGATCTGATATTGTTATTATTGACCATTTTTATGTACACACAGATTTCT
AGCGGATTTAATCCCAAGATCAAGAAAGACCCTTACAAGGGCTTCGTCTA
CACCTCTTTTCAGGAGCGAGCCACCAAGATTTCTCACCAGAATGTCGCAC
GTCTTGCGAACAATGCAGGAGATGGTAACCTTGGCCTTATCTGCAGCAAG
ATTGCGGGGGACGAGTCACGACACGAGAAGGCGTACCAGGCCATTTTCAA
GGAGATCTTGAACAGAGACCCGGAGGGAGGCCTTAAGTCGTTCTACGAGT
TGATGACAGACCAGGTAAAAACTAGATCTTGAACCGTGCTAGCGTAATTC
GACGTGGTTGACTTTTGTACTTAGGAACCTTCACCTAACTTCACCCCCCC
TTAGATCACCATGCCCGCCGTAATGATGACAGACGGGCACGATCCAGACC
TGTTCGAGCACTTTTCCATCACTGCTCAGAAGTTAGGTGTCTACACGGCC
GTGGATTACGCAAATATCTTGGATCACCTCGTGGAAATCTGGGATATCGA
GCACATTGGAGGCCTGTCTGGCGAGGGGGCACGTTATCAAGAAAAGCTTT
GCAAGCTCGGCCCGCGGTACCTGAAACTGGCTGAGATGAGCTTAGATCGT
GTCAAGAAGATGCCGAAGACTCCTTATTCTTGGATTCATGGCCGCATGGC
GTAGAGGTGGGCGGGTTAGGCAAAGGGTAGAGGGGTGCACTCGAAAACGT
GCCATTCGAGGAGTTTTAATTCCGGGAAACTAGGAGGGAGAAGGGACGAA
AACGTCAAAAAGAGCCTCGGCGGATGGAAGGGAACACACATAGCTTACGG
GTCAGGTGTGAAATTTTCTCAGGTTCGGAGTTGACAACGATAGAACAGGA
AGATCGTTGCGATGAAGTTCCTGTCAACCATTTCTTCGAGAGGGCATATG
GAAGAGCGGTTGGAGGGAGGAGGCGTAAGAATGGATACGTGAAGGCGAGA
AGCCAGGCCGGTGTACAAAATTGAGCGGGAAGAATCTTGGCAGGGATTAA
AACAACGAGCAGCGCGACAAGCGTAGTTTGTGGCAGGTGTGAGACGACGG
AGACACGGTAGGGGTCCACGTGAGACGGCAATAAATTGGTTATCTTTTAT
AATGTACTATTTTTTACTTGTCATCGTGCCTGTGCGGTACGAAATTTACC
AATAGGCCGCGAGGCAGGGTACGCAGGAGTGAGAAGGAACCAGAGTAGTT
TTTTGAAAACAAGATGATCTATGAAGGAGTGAGAAGGATCTAACGAGAAG
TATAGGAAAGCAGTATCACCGCTACTACAAATCTGAAACGTGTCCAATTG
TGGAGTGCTGCGAGAATCCATGCAAGAATTGCGTCGCACCTGATGCCCAG
GAAGGTGCACGGAGTTAGGGCAGGTCGAAACGCGATGAACAGGGGCGAGT
GACGACTAAAGCAGATTCGATTGTGGCTTAAAAGTGGATTTTAGTGACGG
AGAGAAAGGTAGGCTCTGTGCGTAATAGGGGCTCGTAAATTTGACGCCTC
TGCCAGCCTGGGGCCGTTTTCATTGCATGAGAGAGACGAGCGTAGAGTTT
TGGTGTAAGCCCGTGCGACCTAAAAGAATGATTCGAGAAGTCTCGAAACC
GTCTCGAGTGAAATATTTTCCTTTTTTCCCATTTGGTATGAAGCACATTT
TTACGCAACCACGAGATGTCGATTTCACTTCGCAGGCACATCGTGCCACT
CTCCCTCTCG back to topCoding sequence (CDS) from alignment at CM002455.1:436228..439687- >rna167 ID=rna167|Name=rna167|organism=Nannochloropsis gaditana|type=CDS|length=3006bp|location=Sequence derived from alignment at CM002455.1:436228..439687- (Nannochloropsis gaditana)
ATCACCATGCCCGCCGTAATGATGACAGACGGGCACGATCCAGACCTGTT
CGAGCACTTTTCCATCACTGCTCAGAAGTTAGGTGTCTACACGGCCGTGG
ATTACGCAAATATCTTGGATCACCTCGTGGAAATCTGGGATATCGAGCAC
ATTGGAGGCCTGTCTGGCGAGGGGGCACGTTATCAAGAAAAGCTTTGCAA
GCTCGGCCCGCGGTACCTGAAACTGGCTGAGATGAGCTTAGATCGTGTCA
AGAAGATGCCGAAGACTCCTTATTCTTGGATTCATGGCCGCATGGCGTAG
ATTTCTAGCGGATTTAATCCCAAGATCAAGAAAGACCCTTACAAGGGCTT
CGTCTACACCTCTTTTCAGGAGCGAGCCACCAAGATTTCTCACCAGAATG
TCGCACGTCTTGCGAACAATGCAGGAGATGGTAACCTTGGCCTTATCTGC
AGCAAGATTGCGGGGGACGAGTCACGACACGAGAAGGCGTACCAGGCCAT
TTTCAAGGAGATCTTGAACAGAGACCCGGAGGGAGGCCTTAAGTCGTTCT
ACGAGTTGATGACAGACCAGATGCACGTCTACCCAGACAAAGTTGAGGTA
ATTACCAGCCTGGAGCCCATGGTAGAGGGTATGCTTACCAAGCTGCTTCT
TCCCACCGGAGAAAAAGCGTGGCAGCCGCAGGACTTCGTGCCAGACCTGA
CGAAGGAGGGTTGGGAGGAGGAGGTCAAGGAGTTCCGCGAAAAAGCCGCC
ACCCTCCCCGACGAGACTTTGGTAGTGCTTGTCGGAGACATGGTGACGGA
GGAAGCCCTACCAACTTACCAGACCTTGTTGAACACCTTCGAGGGCGTCG
ACGATCCTACTGGCACCTCACCATCGGCTTGGTGCAAGTGGACCCGGGGT
TGGACCTCGGAAGAGAACCGCCATGGTGACTTGCTGAACAGATACCTGTA
TTTGACGGGGCGAGTGGACATGCGCTCTATTGAGTGCACCATCCAGCACC
TTATCACCATGCCCGCCGTAATGATGACAGACGGGCACGATCCAGACCTG
TTCGAGCACTTTTCCATCACTGCTCAGAAGTTAGGTGTCTACACGGCCGT
GGATTACGCAAATATCTTGGATCACCTCGTGGAAATCTGGGATATCGAGC
ACATTGGAGGCCTGTCTGGCGAGGGGGCACGTTATCAAGAAAAGCTTTGC
AAGCTCGGCCCGCGGTACCTGAAACTGGCTGAGATGAGCTTAGATCGTGT
CAAGAAGATGCCGAAGACTCCTTATTCTTGGATTCATGGCCGCATGGCGT
AGATTTCTAGCGGATTTAATCCCAAGATCAAGAAAGACCCTTACAAGGGC
TTCGTCTACACCTCTTTTCAGGAGCGAGCCACCAAGATTTCTCACCAGAA
TGTCGCACGTCTTGCGAACAATGCAGGAGATGGTAACCTTGGCCTTATCT
GCAGCAAGATTGCGGGGGACGAGTCACGACACGAGAAGGCGTACCAGGCC
ATTTTCAAGGAGATCTTGAACAGAGACCCGGAGGGAGGCCTTAAGTCGTT
CTACGAGTTGATGACAGACCAGATGCACGTCTACCCAGACAAAGTTGAGG
TAATTACCAGCCTGGAGCCCATGGTAGAGGGTATGCTTACCAAGCTGCTT
CTTCCCACCGGAGAAAAAGCGTGGCAGCCGCAGGACTTCGTGCCAGACCT
GACGAAGGAGGGTTGGGAGGAGGAGGTCAAGGAGTTCCGCGAAAAAGCCG
CCACCCTCCCCGACGAGACTTTGGTAGTGCTTGTCGGAGACATGGTGACG
GAGGAAGCCCTACCAACTTACCAGACCTTGTTGAACACCTTCGAGGGCGT
CGACGATCCTACTGGCACCTCACCATCGGCTTGGTGCAAGTGGACCCGGG
GTTGGACCTCGGAAGAGAACCGCCATGGTGACTTGCTGAACAGATACCTG
TATTTGACGGGGCGAGTGGACATGCGCTCTATTGAGTGCACCATCCAGCA
CCTTATCACCATGCCCGCCGTAATGATGACAGACGGGCACGATCCAGACC
TGTTCGAGCACTTTTCCATCACTGCTCAGAAGTTAGGTGTCTACACGGCC
GTGGATTACGCAAATATCTTGGATCACCTCGTGGAAATCTGGGATATCGA
GCACATTGGAGGCCTGTCTGGCGAGGGGGCACGTTATCAAGAAAAGCTTT
GCAAGCTCGGCCCGCGGTACCTGAAACTGGCTGAGATGAGCTTAGATCGT
GTCAAGAAGATGCCGAAGACTCCTTATTCTTGGATTCATGGCCGCATGGC
GTAGATTTCTAGCGGATTTAATCCCAAGATCAAGAAAGACCCTTACAAGG
GCTTCGTCTACACCTCTTTTCAGGAGCGAGCCACCAAGATTTCTCACCAG
AATGTCGCACGTCTTGCGAACAATGCAGGAGATGGTAACCTTGGCCTTAT
CTGCAGCAAGATTGCGGGGGACGAGTCACGACACGAGAAGGCGTACCAGG
CCATTTTCAAGGAGATCTTGAACAGAGACCCGGAGGGAGGCCTTAAGTCG
TTCTACGAGTTGATGACAGACCAGATGCACGTCTACCCAGACAAAGTTGA
GGTAATTACCAGCCTGGAGCCCATGGTAGAGGGTATGCTTACCAAGCTGC
TTCTTCCCACCGGAGAAAAAGCGTGGCAGCCGCAGGACTTCGTGCCAGAC
CTGACGAAGGAGGGTTGGGAGGAGGAGGTCAAGGAGTTCCGCGAAAAAGC
CGCCACCCTCCCCGACGAGACTTTGGTAGTGCTTGTCGGAGACATGGTGA
CGGAGGAAGCCCTACCAACTTACCAGACCTTGTTGAACACCTTCGAGGGC
GTCGACGATCCTACTGGCACCTCACCATCGGCTTGGTGCAAGTGGACCCG
GGGTTGGACCTCGGAAGAGAACCGCCATGGTGACTTGCTGAACAGATACC
TGTATTTGACGGGGCGAGTGGACATGCGCTCTATTGAGTGCACCATCCAG
CACCTT back to top
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