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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100071g20.7947.mrna |
| Orig protein id | gnl|cribi|Naga_100071g20.7947 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1163232..1166096 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1650 ID=rna1650|Name=rna1650|organism=Nannochloropsis gaditana|type=mRNA|length=1569bp
ATGTATCGCCTTTCAGGCCGGTCATCGTGGGCTCTTTTGTGGGTGGCTCG
TGCATTTAGCACGCGTTCTTCCGACACTCATTCCTCCCTAAGTATGCCTA
CAGTGTGGAGGCCTCGATGGCGCCGGCATCAGATTGGAGGTACTACGTCG
GGAACCGCCACAGCTGCGGGCAGCACAATTGAAGACTCACAGAACAGGGA
AAACAATGAAAGTAGTAGTAGGAACAAACTTGATTCGATTCATGACTCCA
GTGTCCCTGAGAACCTAGCGGCTTCTGAACCTCCTCCTTCGAATCCCGTT
ACTGTCACGCTGGCAGATGTGTGCCCTAACACTCGCCTAACGCTGCCTTG
GTGGGAGGAGGCCCTCCTTTTCCCGTGCTTCATTGTGTTGTGCGCGCCTA
TCTTCTCTTTTATCATGCTGGGCGTGGCGCTGGTGCCCATTTTTGGTTGG
GCTGGTGCCGTCGTACGGTACCTTCCCCTCCTTTGCACGTATTGGACGCT
ACTTTATTTTGATCTCGTTCCCCGCCGGCGACGTCTTAGTCATCCGGCAC
TTTCATGCTGGCTGTTGCGGGCGGTCGTCCGGTACTTCAACTACCATGTG
ATTGTGGAAGACCCCTCGTCCCTCCAACCTGCTACGCCGTACATTGGTGC
TCAGAGCCCTCACGGCATTTACCCTATTGCCACAATATGTGGCGCTCCTT
TCAATTCCGCGGTTTTCCCCGGTCAAGACGCCTATTGCCTTGCCGCCTCA
GCCTTGCAATTACAACCTTTTCTCTGGCAGTGGATGGAGTGCCTGGGGGG
GCGGCCCATTTCGGCCGCGGCTATCAAAGAGGTTGTCGACCAAGGCGACG
TGTGCTGCCTCGTGCCCGGGGGAATCGCAGAAATGTTCATGCTGGACAGC
AGCAATCGGACGGAGCAGATCCTCATCCGTCGGGGCTTTGTGCGCGAGGC
GCTGAAGAACGACGTGGACATCGTGCCCATTTACCACTTTAACCACACGC
AGACCTTCAGCTACGTGCTCCCCCCATACCTCAACGCGTGGCTGTCGGTG
GCGTGCCGGAAAACGGGGCTTCCGGGATGCTTTTTGATCGGTAGATGGGG
CTTGTTCGTGCCGCACAAAGTGGATATGTTCACGGTGGTGGGTCGTCCCA
TCCCTGTGCGGGAGCGGATCAGGCAGATGAGGGGTAGGAAAACCAATGGA
GGAAAGGAGGGAAAGATCCCAGGCACTGAGGAGGTAAGAAGCAGGGAGTG
TAGTGTGGTGGAACCTACTGTGGAGGAGATTGAGGCCATAGTTGCCGAGT
ACAAGGAAGCTTTGCGGCGGATCTATTACAACTTTCGGCCTGTGGGATCG
AAACGTGAGTTGATCATGATCGATAATCGAGGAAGCCCTGGTAGCACAGT
GGTGGGTGGGAACAAGGAGGAACAAGAGGGGAAATCGGACGGGTGTGAAC
GAAGCCTGGATCGGTAAATTAGGGTGTGCTTAGGTTTTAGAAGCATCGTG
TGTGAATAAAATGGTGAGTGCATCGTCCTCGCAAAAGTAGGCAAAATATG
TGGTGTGATCTTGCAGAAC back to topprotein sequence of rna1650 >rna1650-protein ID=rna1650-protein|Name=rna1650|organism=Nannochloropsis gaditana|type=polypeptide|length=660bp
MDEQAGLVKIIQCMNMYGNMEDVQEKGCVEINQLCDFPPIRELLCRVGAV
QALLDALKTFPVSIGVQYAGCQALAKLSVDCNELRLHLGVSGAGTVLVEA
LARFSGEDANLQKSLGSQALPHCEGVRNFCLAAIFQLLQVEENMVPLLRA
NAWETVVNAMAAFPEDNDLTLSGCRLLIVMAEGLIKSGTANTKAMDVIMR
QSPACQVVFRASTRALRHVENAAHQAVALSPLVQDFLLQGAWLTSSALAA
LASLSFENARQLVDLGACEHLRSLMRLCTNDVVVEWTVRALAEIALSLRG
GFSPGAKADSQEHAWHTGMKDSSTNCQAVVAAVSIAPQNQNVQFAGCYAV
ATLATDCRKHQLQFHASHAVEMILQALRLFPDADHVQEWGHRALAVLASD
CPENQSAILQNHGHVLVTSTLSRFLHLARVYFSACYVIVNLAQTNLEARK
ALGTAGACQQVVRGFAGPCGSDLDVLEWSCRALGDLANGCRENQERIRLE
GGCTKVLETLSLLKETSPVHVSGCYALTHLIAGNRDAQVQVGASHGCEKL
VNVILKSLPDSQARLWAFRALLTLTDTSLSVDRIVEMGTVPEMMEVINTW
VGKMEAKAESNGGRDREEEGREKAQSRGKEGSNGGDRLGNAQEEGGDAAR
RRNRISKSGT back to topmRNA from alignment at CM002457.1:1163232..1166096- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1650 ID=rna1650|Name=rna1650|organism=Nannochloropsis gaditana|type=mRNA|length=2865bp|location=Sequence derived from alignment at CM002457.1:1163232..1166096- (Nannochloropsis gaditana)
AGAGTTAGACAAGAGGGAGCGGCCAAAGCCGGCCTCTCACTTGAGCACGA
ACGCATTGGTCTCATTCTCGACGAATCCCACACACAAAGGCTGCCGTATG
TGTATATGACCGCGACTTGGCAGACGGGCAGCTGGAGTCCTGGAAACTGT
TGGTGCCTTGAGCTGTGATCGCTTTTCGTCCAGTTCTGTGACCCACTTCC
AGCATGGACGAACAAGCAGGCTTAGTCAAGATCATCCAATGCATGAATAT
GTATGGGAACATGGAGGATGTGCAGGAGAAGGGTAAGTGGTACCATAAAA
TGATGATAGGTGATACCTGTCAGCGAATCATCTGCGGGGCTTGTCATGCT
CCCTTACGAGTTTCTCAATGAATGGCTAGCCATCCACATGCTTGCGCAGG
CCATCTCACGCTTCAACGGTAAACTAACTACTGCACGAAACTATTGCTTG
ATAGGTTGTGTAGAGATCAACCAGCTGTGCGACTTTCCTCCAATCCGGGA
GCTTCTTTGCCGAGTCGGGGCTGTTCAGGCCTTGTTGGACGCGCTTAAAA
CATTTCCCGTTTCCATTGGTGTTCAATACGCGGGATGTCAAGCCCTTGCA
AAACTCAGCGTAGATTGCAATGAATTGCGCCTCCACTTGGGTGTTTCAGG
TGCAGGGACCGTTTTGGTGGAGGCCCTTGCCCGTTTCTCTGGGGAGGACG
CTAACCTTCAAAAATCACTGGGAAGCCAGGCACTGCCGCACTGCGAAGGC
GTCCGAAATTTTTGTCTCGCGGCAATCTTCCAACTTCTGCAAGTGGAAGA
AAACATGGTCCCTTTGCTGCGCGCCAATGCCTGGGAGACAGTGGTCAACG
CCATGGCGGCCTTTCCTGAGGACAATGACTTGACGCTCTCGGGGTGCCGC
CTGTTGATCGTGATGGCGGAAGGACTCATCAAGTCCGGGACGGCAAACAC
GAAAGCCATGGACGTGATCATGAGGCAGTCCCCCGCGTGCCAAGTGGTGT
TTAGGGCGTCCACCCGCGCCTTGCGTCACGTGGAGAACGCGGCCCACCAG
GCCGTCGCCTTGTCCCCCTTGGTCCAAGACTTCCTGCTCCAGGGGGCTTG
GCTGACCTCGAGTGCCCTGGCTGCGCTCGCCAGTCTTTCCTTTGAGAATG
CCAGGCAGCTGGTGGATCTGGGGGCGTGCGAACATTTGCGGTCATTGATG
CGGCTGTGCACGAATGACGTGGTGGTGGAATGGACCGTCCGGGCGCTTGC
CGAGATTGCACTCTCCCTCCGTGGCGGCTTTTCCCCGGGGGCAAAGGCGG
ACAGTCAGGAGCATGCATGGCATACAGGCATGAAAGACAGCAGCACGAAT
TGCCAGGCCGTCGTGGCCGCCGTGTCCATTGCGCCCCAGAACCAAAACGT
CCAATTTGCCGGGTGCTACGCGGTCGCCACCCTGGCCACAGACTGCCGCA
AGCACCAGCTTCAATTCCACGCCAGCCACGCCGTGGAAATGATTTTGCAG
GCCTTGCGCTTGTTTCCGGACGCGGACCACGTGCAAGAATGGGGCCATCG
GGCCCTGGCGGTCTTGGCCTCCGACTGCCCCGAGAACCAAAGCGCCATCC
TCCAAAATCACGGCCACGTGCTGGTGACTTCCACCCTCTCCCGCTTCCTC
CACCTGGCCCGCGTCTATTTTTCCGCCTGTTACGTGATCGTCAACCTCGC
CCAGACGAACCTGGAGGCTCGGAAAGCCTTGGGCACGGCGGGGGCCTGTC
AGCAGGTGGTAAGAGGATTCGCGGGCCCGTGCGGGAGCGATTTAGATGTG
CTGGAGTGGTCCTGTCGGGCCTTGGGCGACCTGGCCAACGGCTGTCGCGA
AAACCAGGAGCGAATACGGCTCGAGGGGGGTTGTACGAAGGTCCTGGAGA
CCCTGAGCCTCCTCAAAGAGACCTCGCCAGTGCACGTGTCTGGGTGCTAC
GCACTGACCCACCTGATAGCCGGGAACCGGGACGCTCAAGTCCAAGTCGG
CGCCTCGCACGGTTGCGAAAAACTGGTCAACGTGATCCTGAAGTCGTTAC
CGGACTCGCAGGCGCGACTATGGGCCTTCCGGGCCTTGCTGACCCTGACG
GACACCTCGCTGAGTGTGGACAGGATAGTGGAAATGGGGACGGTGCCGGA
GATGATGGAAGTGATCAACACCTGGGTGGGAAAGATGGAGGCCAAGGCGG
AAAGCAACGGGGGTAGAGATCGAGAGGAAGAGGGGCGAGAAAAGGCCCAA
AGTCGGGGAAAAGAAGGGAGCAATGGGGGCGATCGATTGGGAAATGCCCA
GGAGGAAGGCGGCGACGCTGCGAGAAGAAGGAATAGGATCAGTAAATCGG
GAACCTGACAGACACAATCGCAGGAGTTGACCTGCTATCCTCTTTGCAGT
GGGTTGTGTCATGAAAGGGGAACGGGAACGAGACACATGCGAGTCGACCC
CGTCGAACCCTCCAGTGGATATGGATATCAACCTCTAGTGGATATGGATA
TACACATCTGGAAGATATGGATATATACCTCTAGTGGATATGGATATATA
TCCCCAGGCGGGTTTCTGTGGGAGAGCGTGCGCGTGCGTGTGTGTACTTT
TATGTTCCCTGTGCTTCGGACAAATGTTAGACTGTCCGCTCGATGTACAT
GCCGAAAATACAGGCAACGCGAGTCGGGGAGGTCCCCGGACAGGGCAAGG
GCAGGGTAGGCGGGACACCCGGGAAGCGCTATTGCACAGTCCACAAGTTG
TTGAAAATAGGAAAACAGATCCTGGTACATCACTCCACTTTTCAAAATAT
TTTATACAGTGGACGCCAACAGGGGAGGCCACAAAAGTAACAACGTTCTG
CAAGATCACACCACA back to topCoding sequence (CDS) from alignment at CM002457.1:1163232..1166096- >rna1650 ID=rna1650|Name=rna1650|organism=Nannochloropsis gaditana|type=CDS|length=3966bp|location=Sequence derived from alignment at CM002457.1:1163232..1166096- (Nannochloropsis gaditana)
GTTGTGTAGAGATCAACCAGCTGTGCGACTTTCCTCCAATCCGGGAGCTT
CTTTGCCGAGTCGGGGCTGTTCAGGCCTTGTTGGACGCGCTTAAAACATT
TCCCGTTTCCATTGGTGTTCAATACGCGGGATGTCAAGCCCTTGCAAAAC
TCAGCGTAGATTGCAATGAATTGCGCCTCCACTTGGGTGTTTCAGGTGCA
GGGACCGTTTTGGTGGAGGCCCTTGCCCGTTTCTCTGGGGAGGACGCTAA
CCTTCAAAAATCACTGGGAAGCCAGGCACTGCCGCACTGCGAAGGCGTCC
GAAATTTTTGTCTCGCGGCAATCTTCCAACTTCTGCAAGTGGAAGAAAAC
ATGGTCCCTTTGCTGCGCGCCAATGCCTGGGAGACAGTGGTCAACGCCAT
GGCGGCCTTTCCTGAGGACAATGACTTGACGCTCTCGGGGTGCCGCCTGT
TGATCGTGATGGCGGAAGGACTCATCAAGTCCGGGACGGCAAACACGAAA
GCCATGGACGTGATCATGAGGCAGTCCCCCGCGTGCCAAGTGGTGTTTAG
GGCGTCCACCCGCGCCTTGCGTCACGTGGAGAACGCGGCCCACCAGGCCG
TCGCCTTGTCCCCCTTGGTCCAAGACTTCCTGCTCCAGGGGGCTTGGCTG
ACCTCGAGTGCCCTGGCTGCGCTCGCCAGTCTTTCCTTTGAGAATGCCAG
GCAGCTGGTGGATCTGGGGGCGTGCGAACATTTGCGGTCATTGATGCGGC
TGTGCACGAATGACGTGGTGGTGGAATGGACCGTCCGGGCGCTTGCCGAG
ATTGCACTCTCCCTCCGTGGCGGCTTTTCCCCGGGGGCAAAGGCGGACAG
TCAGGAGCATGCATGGCATACAGGCATGAAAGACAGCAGCACGAATTGCC
AGGCCGTCGTGGCCGCCGTGTCCATTGCGCCCCAGAACCAAAACGTCCAA
TTTGCCGGGTGCTACGCGGTCGCCACCCTGGCCACAGACTGCCGCAAGCA
CCAGCTTCAATTCCACGCCAGCCACGCCGTGGAAATGATTTTGCAGGCCT
TGCGCTTGTTTCCGGACGCGGACCACGTGCAAGAATGGGGCCATCGGGCC
CTGGCGGTCTTGGCCTCCGACTGCCCCGAGAACCAAAGCGCCATCCTCCA
AAATCACGGCCACGTGCTGGTGACTTCCACCCTCTCCCGCTTCCTCCACC
TGGCCCGCGTCTATTTTTCCGCCTGTTACGTGATCGTCAACCTCGCCCAG
ACGAACCTGGAGGCTCGGAAAGCCTTGGGCACGGCGGGGGCCTGTCAGCA
GGTGGTAAGAGGATTCGCGGGCCCGTGCGGGAGCGATTTAGATGTGCTGG
AGTGGTCCTGTCGGGCCTTGGGCGACCTGGCCAACGGCTGTCGCGAAAAC
CAGGAGCGAATACGGCTCGAGGGGGGTTGTACGAAGGTCCTGGAGACCCT
GAGCCTCCTCAAAGAGACCTCGCCAGTGCACGTGTCTGGGTGCTACGCAC
TGACCCACCTGATAGCCGGGAACCGGGACGCTCAAGTCCAAGTCGGCGCC
TCGCACGGTTGCGAAAAACTGGTCAACGTGATCCTGAAGTCGTTACCGGA
CTCGCAGGCGCGACTATGGGCCTTCCGGGCCTTGCTGACCCTGACGGACA
CCTCGCTGAGTGTGGACAGGATAGTGGAAATGGGGACGGTGCCGGAGATG
ATGGAAGTGATCAACACCTGGGTGGGAAAGATGGAGGCCAAGGCGGAAAG
CAACGGGGGTAGAGATCGAGAGGAAGAGGGGCGAGAAAAGGCCCAAAGTC
GGGGAAAAGAAGGGAGCAATGGGGGCGATCGATTGGGAAATGCCCAGGAG
GAAGGCGGCGACGCTGCGAGAAGAAGGAATAGGATCAGTAAATCGGGAAC
CTGAATGGACGAACAAGCAGGCTTAGTCAAGATCATCCAATGCATGAATA
TGTATGGGAACATGGAGGATGTGCAGGAGAAGGGTTGTGTAGAGATCAAC
CAGCTGTGCGACTTTCCTCCAATCCGGGAGCTTCTTTGCCGAGTCGGGGC
TGTTCAGGCCTTGTTGGACGCGCTTAAAACATTTCCCGTTTCCATTGGTG
TTCAATACGCGGGATGTCAAGCCCTTGCAAAACTCAGCGTAGATTGCAAT
GAATTGCGCCTCCACTTGGGTGTTTCAGGTGCAGGGACCGTTTTGGTGGA
GGCCCTTGCCCGTTTCTCTGGGGAGGACGCTAACCTTCAAAAATCACTGG
GAAGCCAGGCACTGCCGCACTGCGAAGGCGTCCGAAATTTTTGTCTCGCG
GCAATCTTCCAACTTCTGCAAGTGGAAGAAAACATGGTCCCTTTGCTGCG
CGCCAATGCCTGGGAGACAGTGGTCAACGCCATGGCGGCCTTTCCTGAGG
ACAATGACTTGACGCTCTCGGGGTGCCGCCTGTTGATCGTGATGGCGGAA
GGACTCATCAAGTCCGGGACGGCAAACACGAAAGCCATGGACGTGATCAT
GAGGCAGTCCCCCGCGTGCCAAGTGGTGTTTAGGGCGTCCACCCGCGCCT
TGCGTCACGTGGAGAACGCGGCCCACCAGGCCGTCGCCTTGTCCCCCTTG
GTCCAAGACTTCCTGCTCCAGGGGGCTTGGCTGACCTCGAGTGCCCTGGC
TGCGCTCGCCAGTCTTTCCTTTGAGAATGCCAGGCAGCTGGTGGATCTGG
GGGCGTGCGAACATTTGCGGTCATTGATGCGGCTGTGCACGAATGACGTG
GTGGTGGAATGGACCGTCCGGGCGCTTGCCGAGATTGCACTCTCCCTCCG
TGGCGGCTTTTCCCCGGGGGCAAAGGCGGACAGTCAGGAGCATGCATGGC
ATACAGGCATGAAAGACAGCAGCACGAATTGCCAGGCCGTCGTGGCCGCC
GTGTCCATTGCGCCCCAGAACCAAAACGTCCAATTTGCCGGGTGCTACGC
GGTCGCCACCCTGGCCACAGACTGCCGCAAGCACCAGCTTCAATTCCACG
CCAGCCACGCCGTGGAAATGATTTTGCAGGCCTTGCGCTTGTTTCCGGAC
GCGGACCACGTGCAAGAATGGGGCCATCGGGCCCTGGCGGTCTTGGCCTC
CGACTGCCCCGAGAACCAAAGCGCCATCCTCCAAAATCACGGCCACGTGC
TGGTGACTTCCACCCTCTCCCGCTTCCTCCACCTGGCCCGCGTCTATTTT
TCCGCCTGTTACGTGATCGTCAACCTCGCCCAGACGAACCTGGAGGCTCG
GAAAGCCTTGGGCACGGCGGGGGCCTGTCAGCAGGTGGTAAGAGGATTCG
CGGGCCCGTGCGGGAGCGATTTAGATGTGCTGGAGTGGTCCTGTCGGGCC
TTGGGCGACCTGGCCAACGGCTGTCGCGAAAACCAGGAGCGAATACGGCT
CGAGGGGGGTTGTACGAAGGTCCTGGAGACCCTGAGCCTCCTCAAAGAGA
CCTCGCCAGTGCACGTGTCTGGGTGCTACGCACTGACCCACCTGATAGCC
GGGAACCGGGACGCTCAAGTCCAAGTCGGCGCCTCGCACGGTTGCGAAAA
ACTGGTCAACGTGATCCTGAAGTCGTTACCGGACTCGCAGGCGCGACTAT
GGGCCTTCCGGGCCTTGCTGACCCTGACGGACACCTCGCTGAGTGTGGAC
AGGATAGTGGAAATGGGGACGGTGCCGGAGATGATGGAAGTGATCAACAC
CTGGGTGGGAAAGATGGAGGCCAAGGCGGAAAGCAACGGGGGTAGAGATC
GAGAGGAAGAGGGGCGAGAAAAGGCCCAAAGTCGGGGAAAAGAAGGGAGC
AATGGGGGCGATCGATTGGGAAATGCCCAGGAGGAAGGCGGCGACGCTGC
GAGAAGAAGGAATAGGATCAGTAAATCGGGAACCTGAATGGACGAACAAG
CAGGCTTAGTCAAGATCATCCAATGCATGAATATGTATGGGAACATGGAG
GATGTGCAGGAGAAGG back to top
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