rna1633, rna1633 (mRNA) Nannochloropsis gaditana

Overview
Namerna1633
Unique Namerna1633
TypemRNA
OrganismNannochloropsis gaditana (N. gaditana B-31)
Sequence length1490
Alignment locationCM002457.1:1110322..1110525 +

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Properties
Property NameValue
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100071g2.7949.mrna
Orig protein idgnl|cribi|Naga_100071g2.7949
GbkeymRNA
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002457.1supercontigCM002457.1:1110322..1110525 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
Naga_100071g2gene1570Nannochloropsis gaditana (N. gaditana B-31)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
rna1633rna1633-proteinNannochloropsis gaditana (N. gaditana B-31)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EWM29031.1cds1629Nannochloropsis gaditana (N. gaditana B-31)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>rna1633 ID=rna1633|Name=rna1633|organism=Nannochloropsis gaditana|type=mRNA|length=1490bp
CCTTCCTCCCCCCTTTCCAACCCACCGGGGCCCCCACCGGCGCTTCTCCC
GCCTCCCTCCCTACCTCCTTCCCGGCCTTCTCCGTCGGCGCCTCTCAGAC
CGCCTACAGTCGCAAGGAGAAGAGCCTGGGTTTGCTCTGCGAGAATTTCA
TCCGCACCTTTGGGCGGGAGGGGGAGGAAGGGACGGAGGCCGGGGCCGAG
AACGGGATCTCCCTCGACATGGCGGCAGTCACGTTGAAAGTGGAACGGCG
GCGGATCTACGACATCATCAACATCTTGGAGTCGATCGTCTTCGTCGAAC
GCAAGTGCAAGAACACGTACTATTGGTACGGTGTCAAGTACCTCCGAGAC
ACGTTGAAGCAGCTCCAGGAGGCGGGCTTGAAGCAATGGCCGGAGGACGC
GCGCCTGAACGGAGTGGGGAAAGGAGGAGAGGAGGGAGGGCGGATGCTGG
GAGTAGTCACGTTCACCTCCAAAGGGGTGGAGGGGTCGGCGGGGGGGGAC
AGACAAGAGACAGGGAGGGGGGAGGGTGCACGAGAAGGAGGAGGAGGAGG
AGGAGGAGGAGGGGAAGGGGAAGGAGAAGGGGAAGGGAAGGAGGACAAAC
GGACGGAGGCGGAACGGGAGGAGGAGGAACGGAAGGAGAAGTCTCTGGGG
CGTTTGACGCAAAAGTTCATCCAGCTATTCTTGGTCGGGTACAGCGTCAT
CTCGCTGTCCGGGGCGGCCGAGAAACTGTTGGGTGCGAACGCGCAGAATT
TGAACGACCGGGGAATGAAAACCAAAGTGCGGCGGCTCTACGACATCGCT
AACGTGCTGACTTCCCTCCAACTCATCGCCAAAGTGCACGTCACGGACTC
ACGGAAGCCGTCCTTCAAGTGGGTGGGGCTCTCCCTGGGGGAAATTTATG
CGCTCCCGCCCTTCTCGATCGGGGGCCCGCGGGACTTTCCGGGGGTGCCG
GGCCTCACGCCCAACCGACGGGAGACGGCGGGGGGGGAAGGGGGGGAAGG
AGGGGAGGAGAAACGGAGGGGGCCCAAGGGGGGGAAGGGGGCGGAGGGAG
AGAGGGGCCACGGGAAGCGGCGGTACCGAGGTAAGGCACGAGGTTTGCAA
GGGGAGAAAGGGGGTGGGGAGGGAGGGAAGGAGGGAGGGAAGGAGGGAGG
GAAGGAGGGAGGGGAGGAGGGAGGGGACACGGCGCGGGTCGGTGCCAAAG
TGGAGGAGGAGGAGGCAGGACTGGGAAAGACAGGCGGGGAGGGAGGGGCC
GAAGCGTTGCTCTCCGGCACCGCGGCCGAGTCGCAGGAGGGCGGCACCAA
GGAGGAGGCAGAAGCAGGCGAGCACGCGTTCCCGCCCCCGCCGGCCCCTT
CTATCACCACGCTCGGTCGACCCGCCCTGGTCGACGCAACCTCGGAGATC
CCCCTCTTGCCCCCCGTTGACTTCCTTCCCCATCCCGGAGTGGTAAGGCA
AATCCGGGAAACTCACTGCTTGAGGCCGAAGGGGCCGTAA
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protein sequence of rna1633

>rna1633-protein ID=rna1633-protein|Name=rna1633|organism=Nannochloropsis gaditana|type=polypeptide|length=67bp
MKAGLPVPGAAPSGLLLCSALEEAMTSQECCGGSSNTQHVQLHSAAIVNI
ENEGFGDRHRIRGTKRI
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mRNA from alignment at CM002457.1:1110322..1110525+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>rna1633 ID=rna1633|Name=rna1633|organism=Nannochloropsis gaditana|type=mRNA|length=204bp|location=Sequence derived from alignment at CM002457.1:1110322..1110525+ (Nannochloropsis gaditana)
ATGAAAGCGGGGTTACCAGTGCCGGGAGCAGCTCCTTCAGGTTTACTGCT
TTGTAGTGCATTGGAGGAAGCAATGACTTCGCAAGAATGTtgtggcggca
gcagcaacacgCAACACGTACAGCTGCATTCAGCAGCCATAGTGAACATT
GAAAATGAAGGCTTTGGGGACAGGCACAGGATACGCGGAACGAAAAGAAT
ATAG
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Coding sequence (CDS) from alignment at CM002457.1:1110322..1110525+

>rna1633 ID=rna1633|Name=rna1633|organism=Nannochloropsis gaditana|type=CDS|length=204bp|location=Sequence derived from alignment at CM002457.1:1110322..1110525+ (Nannochloropsis gaditana)
ATGAAAGCGGGGTTACCAGTGCCGGGAGCAGCTCCTTCAGGTTTACTGCT
TTGTAGTGCATTGGAGGAAGCAATGACTTCGCAAGAATGTtgtggcggca
gcagcaacacgCAACACGTACAGCTGCATTCAGCAGCCATAGTGAACATT
GAAAATGAAGGCTTTGGGGACAGGCACAGGATACGCGGAACGAAAAGAAT
ATAG
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Synonyms
Publications