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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100024g20.4305.mrna |
| Orig protein id | gnl|cribi|Naga_100024g20.4305 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1064989..1066816 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1614 ID=rna1614|Name=rna1614|organism=Nannochloropsis gaditana|type=mRNA|length=1991bp
AAACGACGCAGTATCCGCAACCTTGCTTGTTGGACAGAGAAGTATCACGT
GAGATATCGTCACTCTACCATCATTTGGTTTATTTTCATGTTCGCGATTT
CTCGCGTTTTTGGTCTCTGTCGAGAAAGCACAACAGGAAGACGAGCCTCC
CCTTCTGCTAGACGCCTTCCATCCCCTCACTGCCTTGGCCAAGACAGAAA
ATGAAACCTGTCATTTGCGCCGCGACTCATAACCCCCTCTGACAAACACA
GAAAGGTGACATAAGCCTACATTTTCTACTACGAGTGATTTGCGGCTGCC
TTCGTGGGCGTGATTGGAGTTTACTCTTACCCAGAATCTCACGTGCCCGC
TGCTTTGCCCCTACTTCACGGTCCCACAGCCCGGGCTTTCCCACGGAGAG
AATCATCTCATAGTCAGCCAAAGTGATTCTAAAGAATTGCTGTGAACGAG
GAGGCTACACGCCACGCTGCGTGGGTCGTTTTCCGGCCCCTGTATTTCCC
TGGTCCTGCTGTGACAATTTACAAGATAGATTTGAAGAGGAACGTCACCT
TGCACGCGGACTTGGTATCCTTGATTGTGTGTACTAAGATCCCGGCGGCC
GAGCCCGCCTAGGCCGCCCCCCCTCCCGTCGCCGGCATCAACATTGCTCC
TCATTCGCGCTAAGGGCTTCTAAATCCCTCCCCATCGCCCTTTTCACATG
GCCGAAGACACCTCGTCCACGCCGTTGGACATGTCCTTCCTGGACGCAGT
GCCTCACACCTACCGCCTGCTCGCCTCCGGGGGGATTGCTGGGTGCGTGG
CCAAGACCATGACTGCGCCGTTGAGCCGTCTTACCATCCTCTTCCAAGTG
AACAGTGCCCTACATGTAGGCGGGCGGCCTCAATATGCGAACGGTCTGCT
GCCAGCGTTGAGGAAAGTGATGCGGGAAGAAGGCTTCCTGGCCTTCTGGA
AGGGAAACGGGACCAGCGTCCTCCATCGTTTTCCCTACGCAGGCATCAAC
TTCTACAGCTACGAGAAATTCAAAGAGTACCTGGGGGACGGTTCCCCCCG
GAATGAGACGCCCTTCACACGCCTGATAGCCGGGGCATGTGCCGGTGGCG
TCGCCTGCTCGGCTTGCTATCCCTTGGATCTGATACGGACCCGCCTGACG
ATCCAGGACGAAGGCCCCGGGCGGGAGTACCGGTCGATCGGCCACGCGTT
CCGGAAGATTGCGGCCTCGGAGGGCTTGGGTGGGCTCTACCGGGGGCTGG
GCACCACGCTGATGGTAGCCGTGCCGAATCTGGCCATTAGCTATTGCATC
TACGGGACCATGAAGGAGGTAATATACCACTATAAGTACCCGAGCAGGGA
CGTGACGGAGGCTTCGGAGGAGGAGCCGCATTTCTTGGAAAGTCTGGTGT
GCGGGGCGACCTCGGGGATCTGCTCCTCCCTGATCACTTACCCTATGGAC
GTCCTACGCCGGCGTCTGCAAATACTAGGGCTGCACCCAGGCAACCATCG
CCCGGGAGAGACGGTGGGGCCGTGGAATGAACTGAAGACGATTTTGAAGC
ACGAAGGCCCGCGGGGACTCTACCGGGGACTGCTGCCGGAGCTTTTGAAG
GTGACGCCCATGGTCGGTTGTACCTTTACTACGTATGAGCTGATGAAGGA
CGTGTTGGGGGTATAGCTCGGGGGGGGCTTGATGAATGAGTCGGGGGGAA
TGTGATGGGTGTGGCGGGGTGGTTCTAGTGATGACAGAGGCATTCCTAGC
GCCAAGCAAATTATGACAACAGAACAGAGCAAATTGAACTTGCCAGTGGG
GAGGACAGCACTTGACTGTACGTGCCCCGTATCAGGCTCCCTTGCCATAG
CTTTCCAGGACTTGGTGGCGATTAATTGTACTCCTTTCTGCGTATTTCCA
AAACCCCTCACGAATTCTCCAAATTAATGGAGCTCCCAAACCGTCCGTAT
AACACCTTTTTTAATTCCATTTGTCTTGTCGCAATTTTTCC back to topprotein sequence of rna1614 >rna1614-protein ID=rna1614-protein|Name=rna1614|organism=Nannochloropsis gaditana|type=polypeptide|length=401bp
MTVPSSSAANVASAAASHARKGRLAQVFGRMTVACPGEIRAYGACIAARH
FGKDTEAHSDPLERHDIATSNKNCTSNSTIMPRHALRVCKHGTREGGLCG
GRLSTCLLSLGQGAAYCFHRGVTHRLVRLPHCHLAIPTAVPLRPFASSAA
FRGSLPTSEASSAKSGSWASPFSRLKFAVNVARATSSHASSLPAPLRTPE
VEEHQPSLRFVFGEQKQICGGHGVPQEVRTKLFPRVLRGSASILATLPGF
GLPTAPWALPHPGRILKEGHQGQWDIVGVDKSSADTQRQVVEVATHEAED
ADSRDCDLEVNGPCLLFQALLRIALGQRCSTRDCIIVCIVFLSRTLDRSG
SGAYRKGPSIKESQFSCAIVNKINQGVPGGLAGFEMVEQDLEEVYQGGLM
E back to topmRNA from alignment at CM002457.1:1064989..1066816+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1614 ID=rna1614|Name=rna1614|organism=Nannochloropsis gaditana|type=mRNA|length=1828bp|location=Sequence derived from alignment at CM002457.1:1064989..1066816+ (Nannochloropsis gaditana)
ATGAccgtgccctcctccagtgcTGCCAATGTCGCATCTGCAGCAGCCTC
ACACGCACGAAAAGGCCGCCTTGCTCAAGTTTTTGGTAGAATGACCGTGG
CTTGTCCAGGAGAGGTAAAAAGATTGGCTGGAGAAGTTGCGGAGAGGAAA
ACCTCAGTCGAAACGTGTCTCATCGCGTTTGTTATTTGTTATTCTTTTGT
GTGACAGATTCGTGCTTATGGCGCTTGTATTGCGGCCAGGTTGGAAGGAG
GTACGCAGGGAGTGGAGCGCGGAGTATGCGAGTCCGAATTTGCGGTGCTT
CGGACATGCATGCAGGCAGAGTTAAAGGCACTTCGGAAAGGACACGGAGG
CTCACAGTGACCCTCTGGAAAGGCATGACATTGCGACGAGCAACAAAAAC
TGTACGAGCAACTCAACAATCATGCCACGCCATGCCCTCCGGGTTTGCAA
GCATGGCacccgggagggaggattgtGCGGAGGTCGCCTGTCTACGTGCC
TGCTCTCACTCGGACAGGGGGCTGCCTACTGTTTTCACCGCGGCGTCACA
CACAGGCTTGTGAGACTTCCACATTGTCACCTGGCAATCCCGACTGCAGT
ACCACTCCGACCTTTTGCATCGTCCGCAGCGTTTCGTGGCTCTCTTCCCA
CAGTGACTGCATGGACCCTCCGCCCCACCGGCCGCCCCAGCagtcccgcc
ctcgccggcAGTTTGTTCAGCCATGTCCTTTCCAGACGTTTCGGACCGTG
ATGCATCCGGCGTTTTCGTGGACGCGATCGCCTCGTCTACCCACTCCGAC
GAGTAGAGCGAGGCCAGTAGTGCCAAGTCAGGATCCTGGGCGTCCCCCTT
CTCACGACTGAAATTTGCCGTCAACGTCGCAcgggccacctcctcccacg
cttcCTCTTTACCTGCGCCTCTCCGTACCCCCGTTTTCCCGCTATTTCCG
ACTTGACGAGGCTCCAGTCGCGCCAAGACTGCGCTTCGAAGCGGCGCCAC
CTGCtcgaccaggaggaaggagggaacccGGCCCTTGCCGGCCGCGGCCG
TGTTCTCGGGCACCTCCATGAGGGCGAGCTCGTCAAGGTAGCGTCGTACG
TtgatgaggacggggagCTGGTCGAGAAGGACGTCGCTTAGGTACTTGCG
CACGCGCAGGAGTTGGTGCTTCCGGAAGCGGTTCAGGGGGTAGCGTTGAC
GGACCTGGGGGCTGGttaggaggtggaagagcatCAGCCAAGCTTGCGCT
TCGTGTTTGGAGAGCAAAAGCAGATCTGCGGGGGCCACGGCGTGCCACAG
GAGGTCAGGACCAAGCTTTTCCCACGTGTGCTGAGGGGAAGCGCCTCCAT
ACTGGCGACCCTCCCTGGTTTCGGTCTCCCGACTGCTCCATGGGCGCTTC
CTCACCCAGGGCGGATTCTCAAGGAGGGGCACCAGGGCCAGTGGGACATC
GTGGGTGTGGACAAGTCGAGTGCTGACACTCAGAGGCAAGTCGTCGAGGT
GGCCACacacgaggcggaggatgccGACAGCCGTGACTGCGACTTGGAAG
TCAACGGTCCGTGCCTGCTCTTCCAAGCTCTCCTGAGGATCGCGCTTGGC
CAGCGCTGCAGCACGCGAGATTGCATTATCGTCTGCATTGTCTTTCTCAG
CAGGACCTTGGATCGTTCCGGGAGTGGAGCCTATCGCAAAGGCCCCTCCA
TTAAGGAGAGTCAGTTTTCCTGCGCAATAGTCAACAAGATCAACCAGGGC
GTCCCCGGCGGCCTCGCAGGCTTTGAGATGGTAGAGCaagacttggagga
ggttTACCAGGGTGGCCTCATGGAATAA back to topCoding sequence (CDS) from alignment at CM002457.1:1064989..1066816+ >rna1614 ID=rna1614|Name=rna1614|organism=Nannochloropsis gaditana|type=CDS|length=6030bp|location=Sequence derived from alignment at CM002457.1:1064989..1066816+ (Nannochloropsis gaditana)
ATGAccgtgccctcctccagtgcTGCCAATGTCGCATCTGCAGCAGCCTC
ACACGCACGAAAAGGCCGCCTTGCTCAAGTTTTTGGTAGAATGACCGTGG
CTTGTCCAGGAGAGATTCGTGCTTATGGCGCTTGTATTGCGGCCAGGCAC
TTCGGAAAGGACACGGAGGCTCACAGTGACCCTCTGGAAAGGCATGACAT
TGCGACGAGCAACAAAAACTGTACGAGCAACTCAACAATCATGCCACGCC
ATGCCCTCCGGGTTTGCAAGCATGGCacccgggagggaggattgtGCGGA
GGTCGCCTGTCTACGTGCCTGCTCTCACTCGGACAGGGGGCTGCCTACTG
TTTTCACCGCGGCGTCACACACAGGCTTGTGAGACTTCCACATTGTCACC
TGGCAATCCCGACTGCAGTACCACTCCGACCTTTTGCATCGTCCGCAGCG
TTTCGTGGCTCTCTTCCCACAAGCGAGGCCAGTAGTGCCAAGTCAGGATC
CTGGGCGTCCCCCTTCTCACGACTGAAATTTGCCGTCAACGTCGCAcggg
ccacctcctcccacgcttcCTCTTTACCTGCGCCTCTCCGTACCCCCgag
gtggaagagcatCAGCCAAGCTTGCGCTTCGTGTTTGGAGAGCAAAAGCA
GATCTGCGGGGGCCACGGCGTGCCACAGGAGGTCAGGACCAAGCTTTTCC
CACGTGTGCTGAGGGGAAGCGCCTCCATACTGGCGACCCTCCCTGGTTTC
GGTCTCCCGACTGCTCCATGGGCGCTTCCTCACCCAGGGCGGATTCTCAA
GGAGGGGCACCAGGGCCAGTGGGACATCGTGGGTGTGGACAAGTCGAGTG
CTGACACTCAGAGGCAAGTCGTCGAGGTGGCCACacacgaggcggaggat
gccGACAGCCGTGACTGCGACTTGGAAGTCAACGGTCCGTGCCTGCTCTT
CCAAGCTCTCCTGAGGATCGCGCTTGGCCAGCGCTGCAGCACGCGAGATT
GCATTATCGTCTGCATTGTCTTTCTCAGCAGGACCTTGGATCGTTCCGGG
AGTGGAGCCTATCGCAAAGGCCCCTCCATTAAGGAGAGTCAGTTTTCCTG
CGCAATAGTCAACAAGATCAACCAGGGCGTCCCCGGCGGCCTCGCAGGCT
TTGAGATGGTAGAGCaagacttggaggaggttTACCAGGGTGGCCTCATG
GAATAAATGAccgtgccctcctccagtgcTGCCAATGTCGCATCTGCAGC
AGCCTCACACGCACGAAAAGGCCGCCTTGCTCAAGTTTTTGGTAGAATGA
CCGTGGCTTGTCCAGGAGAGATTCGTGCTTATGGCGCTTGTATTGCGGCC
AGGCACTTCGGAAAGGACACGGAGGCTCACAGTGACCCTCTGGAAAGGCA
TGACATTGCGACGAGCAACAAAAACTGTACGAGCAACTCAACAATCATGC
CACGCCATGCCCTCCGGGTTTGCAAGCATGGCacccgggagggaggattg
tGCGGAGGTCGCCTGTCTACGTGCCTGCTCTCACTCGGACAGGGGGCTGC
CTACTGTTTTCACCGCGGCGTCACACACAGGCTTGTGAGACTTCCACATT
GTCACCTGGCAATCCCGACTGCAGTACCACTCCGACCTTTTGCATCGTCC
GCAGCGTTTCGTGGCTCTCTTCCCACAAGCGAGGCCAGTAGTGCCAAGTC
AGGATCCTGGGCGTCCCCCTTCTCACGACTGAAATTTGCCGTCAACGTCG
CAcgggccacctcctcccacgcttcCTCTTTACCTGCGCCTCTCCGTACC
CCCgaggtggaagagcatCAGCCAAGCTTGCGCTTCGTGTTTGGAGAGCA
AAAGCAGATCTGCGGGGGCCACGGCGTGCCACAGGAGGTCAGGACCAAGC
TTTTCCCACGTGTGCTGAGGGGAAGCGCCTCCATACTGGCGACCCTCCCT
GGTTTCGGTCTCCCGACTGCTCCATGGGCGCTTCCTCACCCAGGGCGGAT
TCTCAAGGAGGGGCACCAGGGCCAGTGGGACATCGTGGGTGTGGACAAGT
CGAGTGCTGACACTCAGAGGCAAGTCGTCGAGGTGGCCACacacgaggcg
gaggatgccGACAGCCGTGACTGCGACTTGGAAGTCAACGGTCCGTGCCT
GCTCTTCCAAGCTCTCCTGAGGATCGCGCTTGGCCAGCGCTGCAGCACGC
GAGATTGCATTATCGTCTGCATTGTCTTTCTCAGCAGGACCTTGGATCGT
TCCGGGAGTGGAGCCTATCGCAAAGGCCCCTCCATTAAGGAGAGTCAGTT
TTCCTGCGCAATAGTCAACAAGATCAACCAGGGCGTCCCCGGCGGCCTCG
CAGGCTTTGAGATGGTAGAGCaagacttggaggaggttTACCAGGGTGGC
CTCATGGAATAAATGAccgtgccctcctccagtgcTGCCAATGTCGCATC
TGCAGCAGCCTCACACGCACGAAAAGGCCGCCTTGCTCAAGTTTTTGGTA
GAATGACCGTGGCTTGTCCAGGAGAGATTCGTGCTTATGGCGCTTGTATT
GCGGCCAGGCACTTCGGAAAGGACACGGAGGCTCACAGTGACCCTCTGGA
AAGGCATGACATTGCGACGAGCAACAAAAACTGTACGAGCAACTCAACAA
TCATGCCACGCCATGCCCTCCGGGTTTGCAAGCATGGCacccgggaggga
ggattgtGCGGAGGTCGCCTGTCTACGTGCCTGCTCTCACTCGGACAGGG
GGCTGCCTACTGTTTTCACCGCGGCGTCACACACAGGCTTGTGAGACTTC
CACATTGTCACCTGGCAATCCCGACTGCAGTACCACTCCGACCTTTTGCA
TCGTCCGCAGCGTTTCGTGGCTCTCTTCCCACAAGCGAGGCCAGTAGTGC
CAAGTCAGGATCCTGGGCGTCCCCCTTCTCACGACTGAAATTTGCCGTCA
ACGTCGCAcgggccacctcctcccacgcttcCTCTTTACCTGCGCCTCTC
CGTACCCCCgaggtggaagagcatCAGCCAAGCTTGCGCTTCGTGTTTGG
AGAGCAAAAGCAGATCTGCGGGGGCCACGGCGTGCCACAGGAGGTCAGGA
CCAAGCTTTTCCCACGTGTGCTGAGGGGAAGCGCCTCCATACTGGCGACC
CTCCCTGGTTTCGGTCTCCCGACTGCTCCATGGGCGCTTCCTCACCCAGG
GCGGATTCTCAAGGAGGGGCACCAGGGCCAGTGGGACATCGTGGGTGTGG
ACAAGTCGAGTGCTGACACTCAGAGGCAAGTCGTCGAGGTGGCCACacac
gaggcggaggatgccGACAGCCGTGACTGCGACTTGGAAGTCAACGGTCC
GTGCCTGCTCTTCCAAGCTCTCCTGAGGATCGCGCTTGGCCAGCGCTGCA
GCACGCGAGATTGCATTATCGTCTGCATTGTCTTTCTCAGCAGGACCTTG
GATCGTTCCGGGAGTGGAGCCTATCGCAAAGGCCCCTCCATTAAGGAGAG
TCAGTTTTCCTGCGCAATAGTCAACAAGATCAACCAGGGCGTCCCCGGCG
GCCTCGCAGGCTTTGAGATGGTAGAGCaagacttggaggaggttTACCAG
GGTGGCCTCATGGAATAAATGAccgtgccctcctccagtgcTGCCAATGT
CGCATCTGCAGCAGCCTCACACGCACGAAAAGGCCGCCTTGCTCAAGTTT
TTGGTAGAATGACCGTGGCTTGTCCAGGAGAGATTCGTGCTTATGGCGCT
TGTATTGCGGCCAGGCACTTCGGAAAGGACACGGAGGCTCACAGTGACCC
TCTGGAAAGGCATGACATTGCGACGAGCAACAAAAACTGTACGAGCAACT
CAACAATCATGCCACGCCATGCCCTCCGGGTTTGCAAGCATGGCacccgg
gagggaggattgtGCGGAGGTCGCCTGTCTACGTGCCTGCTCTCACTCGG
ACAGGGGGCTGCCTACTGTTTTCACCGCGGCGTCACACACAGGCTTGTGA
GACTTCCACATTGTCACCTGGCAATCCCGACTGCAGTACCACTCCGACCT
TTTGCATCGTCCGCAGCGTTTCGTGGCTCTCTTCCCACAAGCGAGGCCAG
TAGTGCCAAGTCAGGATCCTGGGCGTCCCCCTTCTCACGACTGAAATTTG
CCGTCAACGTCGCAcgggccacctcctcccacgcttcCTCTTTACCTGCG
CCTCTCCGTACCCCCgaggtggaagagcatCAGCCAAGCTTGCGCTTCGT
GTTTGGAGAGCAAAAGCAGATCTGCGGGGGCCACGGCGTGCCACAGGAGG
TCAGGACCAAGCTTTTCCCACGTGTGCTGAGGGGAAGCGCCTCCATACTG
GCGACCCTCCCTGGTTTCGGTCTCCCGACTGCTCCATGGGCGCTTCCTCA
CCCAGGGCGGATTCTCAAGGAGGGGCACCAGGGCCAGTGGGACATCGTGG
GTGTGGACAAGTCGAGTGCTGACACTCAGAGGCAAGTCGTCGAGGTGGCC
ACacacgaggcggaggatgccGACAGCCGTGACTGCGACTTGGAAGTCAA
CGGTCCGTGCCTGCTCTTCCAAGCTCTCCTGAGGATCGCGCTTGGCCAGC
GCTGCAGCACGCGAGATTGCATTATCGTCTGCATTGTCTTTCTCAGCAGG
ACCTTGGATCGTTCCGGGAGTGGAGCCTATCGCAAAGGCCCCTCCATTAA
GGAGAGTCAGTTTTCCTGCGCAATAGTCAACAAGATCAACCAGGGCGTCC
CCGGCGGCCTCGCAGGCTTTGAGATGGTAGAGCaagacttggaggaggtt
TACCAGGGTGGCCTCATGGAATAAATGAccgtgccctcctccagtgcTGC
CAATGTCGCATCTGCAGCAGCCTCACACGCACGAAAAGGCCGCCTTGCTC
AAGTTTTTGGTAGAATGACCGTGGCTTGTCCAGGAGAGATTCGTGCTTAT
GGCGCTTGTATTGCGGCCAGGCACTTCGGAAAGGACACGGAGGCTCACAG
TGACCCTCTGGAAAGGCATGACATTGCGACGAGCAACAAAAACTGTACGA
GCAACTCAACAATCATGCCACGCCATGCCCTCCGGGTTTGCAAGCATGGC
acccgggagggaggattgtGCGGAGGTCGCCTGTCTACGTGCCTGCTCTC
ACTCGGACAGGGGGCTGCCTACTGTTTTCACCGCGGCGTCACACACAGGC
TTGTGAGACTTCCACATTGTCACCTGGCAATCCCGACTGCAGTACCACTC
CGACCTTTTGCATCGTCCGCAGCGTTTCGTGGCTCTCTTCCCACAAGCGA
GGCCAGTAGTGCCAAGTCAGGATCCTGGGCGTCCCCCTTCTCACGACTGA
AATTTGCCGTCAACGTCGCAcgggccacctcctcccacgcttcCTCTTTA
CCTGCGCCTCTCCGTACCCCCgaggtggaagagcatCAGCCAAGCTTGCG
CTTCGTGTTTGGAGAGCAAAAGCAGATCTGCGGGGGCCACGGCGTGCCAC
AGGAGGTCAGGACCAAGCTTTTCCCACGTGTGCTGAGGGGAAGCGCCTCC
ATACTGGCGACCCTCCCTGGTTTCGGTCTCCCGACTGCTCCATGGGCGCT
TCCTCACCCAGGGCGGATTCTCAAGGAGGGGCACCAGGGCCAGTGGGACA
TCGTGGGTGTGGACAAGTCGAGTGCTGACACTCAGAGGCAAGTCGTCGAG
GTGGCCACacacgaggcggaggatgccGACAGCCGTGACTGCGACTTGGA
AGTCAACGGTCCGTGCCTGCTCTTCCAAGCTCTCCTGAGGATCGCGCTTG
GCCAGCGCTGCAGCACGCGAGATTGCATTATCGTCTGCATTGTCTTTCTC
AGCAGGACCTTGGATCGTTCCGGGAGTGGAGCCTATCGCAAAGGCCCCTC
CATTAAGGAGAGTCAGTTTTCCTGCGCAATAGTCAACAAGATCAACCAGG
GCGTCCCCGGCGGCCTCGCAGGCTTTGAGATGGTAGAGCaagacttggag
gaggttTACCAGGGTGGCCTCATGGAATAA back to top
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