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Properties
| Property Name | Value |
|---|
| Product | threonine synthase |
| Orig transcript id | gnl|cribi|Naga_100024g31.4338.mrna |
| Orig protein id | gnl|cribi|Naga_100024g31.4338 |
| Gene | TS |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1043565..1046389 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1606 ID=rna1606|Name=rna1606|organism=Nannochloropsis gaditana|type=mRNA|length=762bp
ATGATGGAAGGGCACGCCCAAGGAGACGACGAATTACAGTTTATCAGGGT
CCCTGAGACCTCAGTTTCGAACCAAGCCTCAGGACAGACCCCGTATGCCC
CCATGGGCGCCGCCCCGGCCTCCGGGCCGCCTCCTCCCCCCGCCGGCGAC
GCCCTGGCTTTCATCAAACAGTCCAGGCATCCCGTCGCGGCAGCATTTCA
CTTCGTCTTCAAGGCTCTAGCCATTTTTTTCTACCTTTTCGGTGGCTTTT
TCTCTTCCAATTTCGTCTTTATCTGCGTGGTTTGCATCTTGTTGCTGGCT
TTCGATTTCTGGACAGTTAAGAATGTCACGGGGCGCCTCCTCGTCGGCCT
CCGGTGGTGGAACAACGTGCGGGACGATGGCAGCAATGAGTGGGTGTTCG
AATCGGTCGAGAACCCGGGAGAAATCCACCCCGCGGATGCTCGCCTGTTT
TGGACTGGATTGTACGTGACGCCCATTGTATGGTCGGTCTTCTTCTTGGT
GGCCCTCCTTAAATTCTCCGTGCAATGGTTGGTGATCGTTTTCGTGGCTT
TGGTTCTGAGCGGGGCGAATATTGTCGGATACTACAAATGCAGCAACGAC
CAAAAGAAGAAGGTACAAAACGTGGTGCAAGGCGCGGCTTTCAAGACGGC
TTTCGGTCTGGGAACGTCGGCGGTGCAAAGCTTCATTTCATCGACGTTTG
GGCAGCAGCAACAGGGGGGGGGGAACGCAGAGGGGCCACACGGACCCCCT
TCGCACGTGTAG back to topprotein sequence of rna1606 >rna1606-protein ID=rna1606-protein|Name=rna1606|organism=Nannochloropsis gaditana|type=polypeptide|length=713bp
MIVNSGTGADGRSGGGIGSGGNGEEQQAASLSHPRQGYQMSSPSVSSTPQ
SQPHSYGHGAGQSSQSSHHYQPHQHPSGPQYPPTHRGVLYCSTRGGCRDV
TFEEVVMGGLAPDKGLYVPQELPYIPPEQLEKLRDASFVELANYIMRLVV
GPEDIPPENLRVLIECSTKNFRVHEVAPVRKVGPTWVLELFHGPTFAFKD
VALQFLGNVFEYFMAKKKGDPDVKLTVLGATSGDTGSAAIEGLRGKKNVN
VFVLYPKGRVSEVQERQMTTVLDKNVHCIAVENATFDDCQSIIKSAFQDK
EFREKVCLGAVNSINWARVLAQVTYYFFAYFRVLAQNERAMRKEQQQQQQ
QQREGNEGGRGGVSPVTESKATGSGGSGKDGGASDGGEEGGAPATSSGGM
PNSGGGGREGGREGHTGSKRSRSLPKMSFSVPTGNFGDALAGYYAKAMGL
PIDKILIATNENDILHRFFSNGKYWRREVHPTLSPSMDIAISSNFERLLY
HLAGRDPDLLREWMEEFERTGRLTLPPPTLAKAREDFVSCRVDEPVMLET
MLSFLREHHYLLCPHSAVGVAAAKGLDMLDAHTVCLATAHPGKFLDATLK
HLPVEVAEVEEIEEDMPTQLRELDHLPTRSVTLPASAFYVQKYILQTLEG
KDNQALLRWLEMAGLIWGYGDGKLGRRRRRWSMAVAVAVLGTAVGVWVGA
RRAAAGGGRGVLS back to topmRNA from alignment at CM002457.1:1043565..1046389+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1606 ID=rna1606|Name=rna1606|organism=Nannochloropsis gaditana|type=mRNA|length=2825bp|location=Sequence derived from alignment at CM002457.1:1043565..1046389+ (Nannochloropsis gaditana)
TGCGCAAAGGGTCGTTCATGGCCTTGGACCACAGCCATCCTGTGCTTTGA
TTTCTCCCGTCCCGTTGTCTTCTTGCACAAGCTCCTCTCAGCCCTGATTA
TTTTTTATTCACAGGGCACTTGCCCCGTTTGCCTTCAGGTTGCCTTGTTC
AGTGCGGTTGCAACGTGGGCAAGAGTATCGAAGGCCGAGGCCCTGCTTGT
CagcgccccttcctctttgagACAGTCTCTTTACGCATTCCGCGATAAGA
CGGTGTAGAGCGGACAATGATAGTTAACAGCGGCACAGGTGCTGATGGTC
GTAGTGGCGGCGGcattggcagcggcggcaatGGGGAAGAACAACAAGCG
GCCTCGCTCAGTCACCCACGTCAAGGGTATCAAATGTCCAGCCCATCCGT
GTCTTCCACACCGCAAAGCCAGCCTCATTCCTATGGTCACGGAGCTGGAC
AGTCTTCACAGTCCTCGCACCACTACCAGCCGCATCAGCACCCCTCCGGT
CCTCAATACCCACCCACGCACAGGGGCGTGCTCTATTGTTCCACACGAGG
GGGGTGTCGGGATGTGACATTTGAGGAGGTCGTCATGGGCGGTCTGGCTC
CCGACAAAGGACTGTATGTGCCCCAGGAACTCCCTTACATACCTCCTGAA
CAGCTTGAAAAGCTTCGTGACGCTTCTTTCGTGGAATTGGCAAATTACAT
CATGCGCCTTGTCGTCGGGCCTGAGGACATCCCCCCGGAAAACTTGCGAG
TCTTGATCGAGTGCAGCACCAAAAATTTCCGGGTGCACGAAGTGGCCCCT
GTGCGGAAGGTGGGCCCCACTTGGGTGCTTGAGCTCTTCCACGGTCCCAC
ATTTGCGTTCAAGGACGTGGCATTGCAGTTCCTCGGCAATGTCTTCGAGT
ACTTcatggcgaagaagaaaggcgacCCGGACGTAAAGCTGACGGTCTTG
GGGGCCACATCGGGGGACACAGGATCGGCGGCGATCGAAGGCTTGAGGGG
TAAGAAGAATGTGAATGTCTTCGTGCTCTACCCCAAAGGAAGGGTGAGTG
AGGTCCAGGAACGTCAGATGACAACAGTCTTGGACAAGAACGTGCATTGC
ATCGCGGTTGAGAACGCCACCTTTGACGACTGCCAAAGCATCATCAAGTC
CGCTTTCCAGGATAAAGAGTTCCGCGAGAAAGTCTGTCTTGGGGCGGTCA
ATTCGATCAACTGGGCCCGGGTCCTGGCGCAGGTCACCTATTATTTCTTT
GCCTACTTCCGCGTTTTGGCTCAAAACGAGCGGGCCATGCggaaagagca
gcagcagcaacaacaacagcaacggGAAGGTAATgagggtgggcgaggag
gcgtcTCGCCGGTGACAGAGAGCAAAGCGACGGGGAGCGGCGGGtctggg
aaggacgggggtgCGTCggatggaggtgaggagggtggcgccCCCGCCAC
GAGCTCCGGTGGGATGCCCAAcagcgggggtggagggagggaagggggaa
gggagggacataCTGGGAGTAAGCGGTCGAGGAGCCTCCCCAAGATGTCT
TTCTCCGTGCCGACGGGCAATTTCGGCGACGCCTTGGCTGGATACTACGC
CAAGGCCATGGGGCTTCCCATCGACAAAATTCTGATCGCCACCAACGAGA
ACGATATCTTGCACCGGTTCTTTTCCAACGGCAAGTActggcggagggag
gtgcacCCGACGTTGTCGCCCTCGATGGATATCGCCATCAGCAGCAATTT
TGAACGTCTCCTCTATCACTTGGCGGGGCGGGACCCGGACTTGCTGCGGG
AATGGATGGAGGAGTTCGAGCGCACCGGCCGACTCaccttgcccccgccc
accctcgcCAAGGCACGCGAAGACTTCGTATCGTGCCGGGTGGACGAGCC
GGTTATGTTGGAGACCATGCTGTCTTTCCTCCGCGAGCACCATTACCTCC
TCTGCCCGCACAGTGCGGTGGGCGTCGCCGCGGCGAAGGGACTGGATATG
TTGGATGCGCACACCGTTTGTCTGGCCACAGCCCACCCGGGAAAATTCCT
GGACGCCACATTGAAGCACTTGCCAGTGGAGGTggcagaggtggaggaga
tcgaggaaGATATGCCCACCCAATTGAGAGAGCTCGatcacctccccacc
cgatCTGTAACCTTGCCGGCGAGCGCATTTTATGTGCAGAAATACATCCT
GCAAACCcttgaagggaaggacaacCAAGCCTTGTTGCGGTGGCTGGAGA
TGGCCGGCTTGATCTGGGGGTACGGAGACGGAAAACTCGGACGGAGAAGA
CGACGGTGGTcgatggcggtggcggtCGCGGTGCTTGGGACCGCGGTGGG
GGTCTGGgtgggggcgagaagggcggccgcgggcggtgggagaggagtcc
TCTCCTAGGGAGGGTGGGTGTGGGAAGAGATAGGGAAGGCCTTGAGGCAT
GTATGAGTAGACAAGCAGGAGGCGTCCGGCAATCGTCGCATTTGACCATG
CGTAAGCGCGTgaggggcggacgggagAGATGTTTTCGAGGGGGGACCAG
AGGTGGGATGTGGGGCGTGCAGGTCGTATtagcctccctgtcctcatGTC
TGTGCTTTATGCAAATATTTGAAATCTTGGTggcgacgggagggcggcgg
agatAGGCCGGAGCGGACAGCATTGAGGTGGTGGAAGTAATTACGTGGTA
TTAGCACGAAGGCTGCGCCGTGGATCGTGGGGTCAGTCTGATGCGAGCCC
ACGCCTGTCATTCCACGGGCAATGCGAGTAATATGACTGCATACAAAAAA
TAAGCGAGTGGAGGACACGAAACAG back to topCoding sequence (CDS) from alignment at CM002457.1:1043565..1046389+ >rna1606 ID=rna1606|Name=rna1606|organism=Nannochloropsis gaditana|type=CDS|length=2142bp|location=Sequence derived from alignment at CM002457.1:1043565..1046389+ (Nannochloropsis gaditana)
ATGATAGTTAACAGCGGCACAGGTGCTGATGGTCGTAGTGGCGGCGGcat
tggcagcggcggcaatGGGGAAGAACAACAAGCGGCCTCGCTCAGTCACC
CACGTCAAGGGTATCAAATGTCCAGCCCATCCGTGTCTTCCACACCGCAA
AGCCAGCCTCATTCCTATGGTCACGGAGCTGGACAGTCTTCACAGTCCTC
GCACCACTACCAGCCGCATCAGCACCCCTCCGGTCCTCAATACCCACCCA
CGCACAGGGGCGTGCTCTATTGTTCCACACGAGGGGGGTGTCGGGATGTG
ACATTTGAGGAGGTCGTCATGGGCGGTCTGGCTCCCGACAAAGGACTGTA
TGTGCCCCAGGAACTCCCTTACATACCTCCTGAACAGCTTGAAAAGCTTC
GTGACGCTTCTTTCGTGGAATTGGCAAATTACATCATGCGCCTTGTCGTC
GGGCCTGAGGACATCCCCCCGGAAAACTTGCGAGTCTTGATCGAGTGCAG
CACCAAAAATTTCCGGGTGCACGAAGTGGCCCCTGTGCGGAAGGTGGGCC
CCACTTGGGTGCTTGAGCTCTTCCACGGTCCCACATTTGCGTTCAAGGAC
GTGGCATTGCAGTTCCTCGGCAATGTCTTCGAGTACTTcatggcgaagaa
gaaaggcgacCCGGACGTAAAGCTGACGGTCTTGGGGGCCACATCGGGGG
ACACAGGATCGGCGGCGATCGAAGGCTTGAGGGGTAAGAAGAATGTGAAT
GTCTTCGTGCTCTACCCCAAAGGAAGGGTGAGTGAGGTCCAGGAACGTCA
GATGACAACAGTCTTGGACAAGAACGTGCATTGCATCGCGGTTGAGAACG
CCACCTTTGACGACTGCCAAAGCATCATCAAGTCCGCTTTCCAGGATAAA
GAGTTCCGCGAGAAAGTCTGTCTTGGGGCGGTCAATTCGATCAACTGGGC
CCGGGTCCTGGCGCAGGTCACCTATTATTTCTTTGCCTACTTCCGCGTTT
TGGCTCAAAACGAGCGGGCCATGCggaaagagcagcagcagcaacaacaa
cagcaacggGAAGGTAATgagggtgggcgaggaggcgtcTCGCCGGTGAC
AGAGAGCAAAGCGACGGGGAGCGGCGGGtctgggaaggacgggggtgCGT
CggatggaggtgaggagggtggcgccCCCGCCACGAGCTCCGGTGGGATG
CCCAAcagcgggggtggagggagggaagggggaagggagggacataCTGG
GAGTAAGCGGTCGAGGAGCCTCCCCAAGATGTCTTTCTCCGTGCCGACGG
GCAATTTCGGCGACGCCTTGGCTGGATACTACGCCAAGGCCATGGGGCTT
CCCATCGACAAAATTCTGATCGCCACCAACGAGAACGATATCTTGCACCG
GTTCTTTTCCAACGGCAAGTActggcggagggaggtgcacCCGACGTTGT
CGCCCTCGATGGATATCGCCATCAGCAGCAATTTTGAACGTCTCCTCTAT
CACTTGGCGGGGCGGGACCCGGACTTGCTGCGGGAATGGATGGAGGAGTT
CGAGCGCACCGGCCGACTCaccttgcccccgcccaccctcgcCAAGGCAC
GCGAAGACTTCGTATCGTGCCGGGTGGACGAGCCGGTTATGTTGGAGACC
ATGCTGTCTTTCCTCCGCGAGCACCATTACCTCCTCTGCCCGCACAGTGC
GGTGGGCGTCGCCGCGGCGAAGGGACTGGATATGTTGGATGCGCACACCG
TTTGTCTGGCCACAGCCCACCCGGGAAAATTCCTGGACGCCACATTGAAG
CACTTGCCAGTGGAGGTggcagaggtggaggagatcgaggaaGATATGCC
CACCCAATTGAGAGAGCTCGatcacctccccacccgatCTGTAACCTTGC
CGGCGAGCGCATTTTATGTGCAGAAATACATCCTGCAAACCcttgaaggg
aaggacaacCAAGCCTTGTTGCGGTGGCTGGAGATGGCCGGCTTGATCTG
GGGGTACGGAGACGGAAAACTCGGACGGAGAAGACGACGGTGGTcgatgg
cggtggcggtCGCGGTGCTTGGGACCGCGGTGGGGGTCTGGgtgggggcg
agaagggcggccgcgggcggtgggagaggagtccTCTCCTAG back to top
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