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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100024g34.4363.mrna |
| Orig protein id | gnl|cribi|Naga_100024g34.4363 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:1038449..1041698 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1603 ID=rna1603|Name=rna1603|organism=Nannochloropsis gaditana|type=mRNA|length=1342bp
TTGCTCGCTTAATCCCTCGTCCTCCGTATCAATGTTTACTTCCTCTTCTT
CTTCAACCTCGATATCGTCCTCCGAGGACAGTAGCCGTCGCGGGGGCCTC
AAACTTCGCATTGTTCTTCAAGCTGATCGCTTTGACAAGACCCCGGCTCG
GTCATCAAATGACCAATATCATAGCGCTACCGACTAGTGCCTCTCCAAAG
CGCATCCATCAGCATTCTTGGTGCCCTAACCCGGAACTCCTGTGCGGGAG
AGCTTGCCAAAAGAGTAAGAAAGACCGTTGAACGGTACCGTGGATCATGT
ATTATGGTGGTATGGCCATACTATTTTTGTTCCTTCTCCCACTGGTTTCC
GCCTTCAGCCCTCCCCTCAGCACGGCAAGACCTCGAATCAGCACGATCAC
GAAGGCGGTAGCTTTACCCGCTTCGGATCAGTCCACTTTGAACAAAAGCC
CCATTGTTATCTTCCCGGCACAATTTGGCGTCGCAAAAGATTACGAGGAA
ATGATTGCGGAGCTAAATTCGCGAGGTCATCCGGCGTATGCGGTAGATCT
CTCCCGTTTTGATTGGCTCAAAATAACCAAGTCTGCCATTACGCAAGACT
ACTGGAGAGGCACGCTGAAACCCTCGGGAACTTTGGATTTTTATTTCGAT
GCCGCCGCAGCCATAATCGAGCGCGTGAAGTTCGAATATCCCGATCGCAA
AATTCACCTTGTGGCTCATTCCATCGGAGGCTGGGTTGCAAGGGCATACT
GCGGCGAGGTAGCTGACCCAGAGGACGTCAACAAGCGATTCATCTCCCTT
ACCACGCTCGGCTCTCCGAATTACCCTCCTCCCGCCGGGGAAGGCATCTG
GGGTTCGATCGATCAGACACGCGGATTGCTAGAGTATGTGAATCTAAGAT
TTCCCGGAGCCTTTCACAAGGGAATGAAATACGTATCGGTTGGAGGGGTA
GGAACCAAGGGTAGGTTTGGTGGGGGCCTCGAAGAGAGCATCGCGTACAT
AAGTTATCTACCTTTGTGTGGTAAAGGGGATGCTGAGGGTGATGGTATTA
TACCCGAATCGGTGGCATTTTTGGAGGGCTCCACGCACGTCCGTGTGATG
GAGGCGAAGCACTCTGGATTTATCCCGACGGCAGGCCCGAGCATCAAAAT
TCCGGGGTACGTCTGGTATGGAACGCCGGAGATCGTGGATCAGTGGTTGG
TGCATTTACCGGAATCAAAAAAGGTCGGGCTCAGGGGGTGGAATTGAGAA
TCGCAGCATGCGACAGTGTAGAATCGGAACATGTGATGGTGTAAGTGCAT
GTGAAAATGTGATGTCGATTTGCTCGAGGCCCTACTGACGAT back to topprotein sequence of rna1603 >rna1603-protein ID=rna1603-protein|Name=rna1603|organism=Nannochloropsis gaditana|type=polypeptide|length=916bp
MRSLRPPRRLLSSEDDIEVEEEEEVNIDTEDEGLSEQELPSRELAAERNG
DNDGKLDAFKTKALPRRTSSSSPYYSTTQATHPRLFEGFLASATSAARSA
HAHPAQLPVHPPLMSSPPHVSSTAFGRSAASVISAASNVTSVASKKGLHE
EISRLHQVLGLQAQELEMVHESLRAKDDTLRRAQGQSDDLLQEARQARVD
LKRCRKSKLETEEALEEAQKRVLVLQEKVKILEMAVRRTGEVGNSSPGSP
QGPLEEAGSVARTKARAEAKAREAAELVDGMRARLDDGMEQLRECLATIE
TLETSLHRSEREKIQAQGEVRRLTLSLSSQDAGGSEVTAWKARATAAEAR
AKAMEEELSSLRERESQTPAAARTIMELEARCQNLEEVLRKSKEVDREAL
EAAQRATARLESERDAWRGKEMRRRQEVTDAKSQAETYRRKALKLEDMLE
SRRAAEEGGGKRRGGARGHDQAKAAEGVARAAERALRSQQEELKARQTEA
ADLRSKCRDYLQAMNGVMDDLERMKAQQEEEQQRTKSRKESLDKERREKS
REALSKAQARCLAFEKESLEARRIVKAEQEKARELEMAVSEAAARIVAYE
EEMAGTRAEMSRTVHQLEELQAVLRQQEELAGQNGEQGESRPRGQPGRSP
QPMASKAPQRQEEEALPTSAHASTFHLHPHNGLGEMSQKIIPRKPSQGPP
EIREDRLTEVLMRTTQQVQRATRSTHTVFPATSDGTTAVSPSTVVASHVP
PIGPPAFAASSASSALAAFQRLRDQLRRSHRDHGLPIPVSEHQEQEGGIP
FSSLFPSSAGREEERTQEHGEHRADKQDAGGKGGAGGLQAALGDEESEGE
EGNERVLPESLEQILQRCRSLKADLLTAVDCEEERELSLGETPQKKREVS
KTAKRTKRKVPRKETA back to topmRNA from alignment at CM002457.1:1038449..1041698+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1603 ID=rna1603|Name=rna1603|organism=Nannochloropsis gaditana|type=mRNA|length=3250bp|location=Sequence derived from alignment at CM002457.1:1038449..1041698+ (Nannochloropsis gaditana)
CGCACAGGAGTTCCGGGTTAGGGCACCAAGAATGCTGATGGATGCGCTTT
GGAGAGGCACTAGTCGGTAGCGCTATGATATTGGTCATTTGATGACCGAG
CCGGGGTCTTGTCAAAGCGATCAGCTTGAAGAACAATGCGAAGTTTGAGG
CCCCCGCGACGGCTACTGTCCTCGGAGGACGATATCGaggttgaagaaga
agaggaagtaaACATTGatacggaggacgagggattAAGCGAGCAAGAAC
TGCCGTCCCGCGAGCTTGCGGCGGAACGCAATGGCGACAACGACGGCAAG
TTGGACGCCTTCAAGACCAAAGCCCTTCCACGTCGcacttcatcctcctc
tccataTTACAGTACAACACAAGCAACACATCCACGACTGTTTGAAGGAT
TCTTGGCCTCGGCAACGTCGGCTGCGAGGTCCGCTCACGCTCATCCAGCG
CAGTTACCTGTGCACCCACCCCTcatgtcttcccccccccacgtctcATC
CACCGCATTCGGTCGAAGCGCCGCAAGCGTCATCAGTGCCGCCAGTAATG
TGACAAGTGTTGCAAGCAAAAAGGGCCTGCACGAAGAGATCTCCCGTTTG
CACCAAGTGCTGGGGCTCCAGGCACAGGAACTCGAGATGGTCCACGAGTC
ATTGCGGGCCAAGGACGACACTCTCAGGCGCGCCCAGGGTCAAAGCGATG
ATCTTCTTCAGGAAGCTAGACAGGCACGGGTAGATCTGAAACGATGTCGA
AAGAGTAAATTGGAGACCGAAGAAGCCCTGGAAGAGGCACAGAAAAGGGT
GCTTGTTTTGCAAGAGAAAGTGAAAATACTGGAGATGGCGGTGCGGCGGA
CGGGCGAGGTTGGCAACAGCTCCCCGGGAAGTCCCCAAGGACCattggag
gaggccgggTCCGTGGCCCGTACAAAGGCCAGAGCAGAAGCAAAGGCcag
agaggcggcggagctggtggaTGGGATGAGAGCGAGGCTGGACGACGGGA
TGGAGCAGCTCCGGGAGTGCCTGGCGACGATCGAGACGCTCGAAACGTCC
TTGCACAGGTCGGAACGCGAGAAGATCCAGGCGCAAGGGGAGGTGCGAAG
ACTGACATTATCTTTGTCGTCCCAAGACGCCGGCGGCAGCGAAGTGACTG
CATGGAAGGCCAGGGCGACGGCAGCAGAGGCGCGAGccaaggcgatggag
gaggagttaTCGTCGCTACGGGAGCGAGAATCCCAAACCCCGGCGGCGGC
TCGTACAATCATGGAGCTGGAGGCCCGGTGTCAGAACCTGGAGGAAGTCT
TGCGCAAATCGAAAGAGGTGGATCGGGAGGCTCTGGAAGCGGCCCAGAGG
GCCACCGCGCGGTTGGAGAGTGAGCGAGACGCCTggcgtgggaaggagat
gcgGCGGCGACAGGAGGTCACAGACGCCAAGTCTCAAGCGGAGACATACC
GGCGCAAAGCGCTTAAGCTAGAGGACATGTTGGAGTCGCGGAGagcggcg
gaagaaggaggcgggaagcgtCGCGGTGGGGCCAGGGGCCACGACCAGGC
CAAGGCGGCAGAAGGCGTCGCCCGTGCTGCGGAGCGAGCACTGAGGAGTC
AGCAAGAAGAGCTAAAAGCTAGGCAGACGGAGGCCGCTGACCTGAGGTCC
AAGTGCCGGGATTACCTGCAGGCTATGAACGGCGTGATGGACGATTTGGA
GCGGATGAAAGcgcagcaggaggaagagcagcagcggaCCAAGTCAAGGA
AGGAATccctggacaaggaaaggagagagaaaagtcGGGAGGCGCTGAGC
AAGGCTCAAGCCCGCTGCCTTGCGTTCGAGAAAGAGAGCTTGGAGGCACG
GAGGATCGTGAAGGCCGAGCAAGAGAAGGCGCGGGAGCTTGAAATGGCGG
TGTCCGAAGCAGCGGCTCGGATCGTGGCCtacgaagaggagatggcagGA
ACGCGGGCAGAGATGTCGAGGACCGTCCACCAGCTCgaggagctgcaggc
ggTATTGAGGCAGCAAGAGGAGCTGGCCGGCCAAAAtggagaacaaggag
aatCGCGACCGAGGGGGCAGCCAGGACGAAGTCCACAGCCGATGGCGTCC
AAGGCGCCACaaagacaagaggaagaggcactACCAACGTCAGCACATGC
CTCTACCTTTCATTTACACCCGCATAACGGGCTCGGAGAAATGTCACAGA
AAATCATCCCGAGGAAGCCGAGCCAGGGGCCTCCGGAGATCAGGGAGGAC
CGATTGACAGAGGTACTGATGCGCACTACCCAGCAAGTTCAAAGGGCGAC
TCGTAGCACACACACCGTGTTCCCCGCGACGTCCGATGGCACTACTGCAG
TGTCTCCCTCCACAGTTGTGGCCAGccacgtccctcccatcGGGCCGCCC
GCTTTCGCCGCCTCGTCCGCTTCgtcggccttggcggccttcCAAAGGCT
GCGGGACCAACTCCGACGATCCCACAGGGACCACGGCCTTCCCATACCCG
TTTCCGAACACcaagaacaagaaggaggcattCCTTTTTCGTCCTTGTTT
CCGAGCtcggcgggaagggaagaggagcggacGCAGGAGCACGGTGAGCA
TCGGGCTGACAAGCAGGACGCGGGCGGCAAAGGCGGTGCGGGGGGGCTCC
AGGCAGCGCTGGGAGATGAAGAgtcagagggagaggagggaaacgaaagg
GTCTTGCCTGAATCGTTGGAGCAAATCCTGCAGCGCTGTCGTTCCCTCAA
GGCCGATCTGCTGACGGCCGTAGAttgtgaagaggaaagagagctATCCC
TGGGAGAAACGCCGCAGAAGAAACGCGAGGTCTCCAAGACGGCGAAgcgg
acaaagaggaaggtgccAAGGAAGGAAACAGCATGATCAACTGATGGATG
GGCTGTCACTGGATcgaagaagatgaagcaGCTTCCGTGTACGTGACCTC
GACAAGTAATTGCCAGcctaagggggggggcatgtcgGCTGCCGGGGCCT
GGCTACCCACTGTTAACCAGAGACATGAGAAGAGCGTAAGCGGAGACTCT
GGTTTTATTTCTTTGTTCGCGTCGTCCCCTACATTCTTAAGATTTGACTC
ACGAAAGGATCCGTTAGTGACGATGATAGTCGTAGACACACAAGAGCTGC
TTCGGTATGTATGTAGCTTTCCATCCCTAGGTTTCCCATTCCGaccattt
tctttcttcccctgcatCCCAGAAATTGGAAAATGAAACACAAGGCGGTT
back to topCoding sequence (CDS) from alignment at CM002457.1:1038449..1041698+ >rna1603 ID=rna1603|Name=rna1603|organism=Nannochloropsis gaditana|type=CDS|length=2751bp|location=Sequence derived from alignment at CM002457.1:1038449..1041698+ (Nannochloropsis gaditana)
ATGCGAAGTTTGAGGCCCCCGCGACGGCTACTGTCCTCGGAGGACGATAT
CGaggttgaagaagaagaggaagtaaACATTGatacggaggacgagggat
tAAGCGAGCAAGAACTGCCGTCCCGCGAGCTTGCGGCGGAACGCAATGGC
GACAACGACGGCAAGTTGGACGCCTTCAAGACCAAAGCCCTTCCACGTCG
cacttcatcctcctctccataTTACAGTACAACACAAGCAACACATCCAC
GACTGTTTGAAGGATTCTTGGCCTCGGCAACGTCGGCTGCGAGGTCCGCT
CACGCTCATCCAGCGCAGTTACCTGTGCACCCACCCCTcatgtcttcccc
cccccacgtctcATCCACCGCATTCGGTCGAAGCGCCGCAAGCGTCATCA
GTGCCGCCAGTAATGTGACAAGTGTTGCAAGCAAAAAGGGCCTGCACGAA
GAGATCTCCCGTTTGCACCAAGTGCTGGGGCTCCAGGCACAGGAACTCGA
GATGGTCCACGAGTCATTGCGGGCCAAGGACGACACTCTCAGGCGCGCCC
AGGGTCAAAGCGATGATCTTCTTCAGGAAGCTAGACAGGCACGGGTAGAT
CTGAAACGATGTCGAAAGAGTAAATTGGAGACCGAAGAAGCCCTGGAAGA
GGCACAGAAAAGGGTGCTTGTTTTGCAAGAGAAAGTGAAAATACTGGAGA
TGGCGGTGCGGCGGACGGGCGAGGTTGGCAACAGCTCCCCGGGAAGTCCC
CAAGGACCattggaggaggccgggTCCGTGGCCCGTACAAAGGCCAGAGC
AGAAGCAAAGGCcagagaggcggcggagctggtggaTGGGATGAGAGCGA
GGCTGGACGACGGGATGGAGCAGCTCCGGGAGTGCCTGGCGACGATCGAG
ACGCTCGAAACGTCCTTGCACAGGTCGGAACGCGAGAAGATCCAGGCGCA
AGGGGAGGTGCGAAGACTGACATTATCTTTGTCGTCCCAAGACGCCGGCG
GCAGCGAAGTGACTGCATGGAAGGCCAGGGCGACGGCAGCAGAGGCGCGA
GccaaggcgatggaggaggagttaTCGTCGCTACGGGAGCGAGAATCCCA
AACCCCGGCGGCGGCTCGTACAATCATGGAGCTGGAGGCCCGGTGTCAGA
ACCTGGAGGAAGTCTTGCGCAAATCGAAAGAGGTGGATCGGGAGGCTCTG
GAAGCGGCCCAGAGGGCCACCGCGCGGTTGGAGAGTGAGCGAGACGCCTg
gcgtgggaaggagatgcgGCGGCGACAGGAGGTCACAGACGCCAAGTCTC
AAGCGGAGACATACCGGCGCAAAGCGCTTAAGCTAGAGGACATGTTGGAG
TCGCGGAGagcggcggaagaaggaggcgggaagcgtCGCGGTGGGGCCAG
GGGCCACGACCAGGCCAAGGCGGCAGAAGGCGTCGCCCGTGCTGCGGAGC
GAGCACTGAGGAGTCAGCAAGAAGAGCTAAAAGCTAGGCAGACGGAGGCC
GCTGACCTGAGGTCCAAGTGCCGGGATTACCTGCAGGCTATGAACGGCGT
GATGGACGATTTGGAGCGGATGAAAGcgcagcaggaggaagagcagcagc
ggaCCAAGTCAAGGAAGGAATccctggacaaggaaaggagagagaaaagt
cGGGAGGCGCTGAGCAAGGCTCAAGCCCGCTGCCTTGCGTTCGAGAAAGA
GAGCTTGGAGGCACGGAGGATCGTGAAGGCCGAGCAAGAGAAGGCGCGGG
AGCTTGAAATGGCGGTGTCCGAAGCAGCGGCTCGGATCGTGGCCtacgaa
gaggagatggcagGAACGCGGGCAGAGATGTCGAGGACCGTCCACCAGCT
CgaggagctgcaggcggTATTGAGGCAGCAAGAGGAGCTGGCCGGCCAAA
AtggagaacaaggagaatCGCGACCGAGGGGGCAGCCAGGACGAAGTCCA
CAGCCGATGGCGTCCAAGGCGCCACaaagacaagaggaagaggcactACC
AACGTCAGCACATGCCTCTACCTTTCATTTACACCCGCATAACGGGCTCG
GAGAAATGTCACAGAAAATCATCCCGAGGAAGCCGAGCCAGGGGCCTCCG
GAGATCAGGGAGGACCGATTGACAGAGGTACTGATGCGCACTACCCAGCA
AGTTCAAAGGGCGACTCGTAGCACACACACCGTGTTCCCCGCGACGTCCG
ATGGCACTACTGCAGTGTCTCCCTCCACAGTTGTGGCCAGccacgtccct
cccatcGGGCCGCCCGCTTTCGCCGCCTCGTCCGCTTCgtcggccttggc
ggccttcCAAAGGCTGCGGGACCAACTCCGACGATCCCACAGGGACCACG
GCCTTCCCATACCCGTTTCCGAACACcaagaacaagaaggaggcattCCT
TTTTCGTCCTTGTTTCCGAGCtcggcgggaagggaagaggagcggacGCA
GGAGCACGGTGAGCATCGGGCTGACAAGCAGGACGCGGGCGGCAAAGGCG
GTGCGGGGGGGCTCCAGGCAGCGCTGGGAGATGAAGAgtcagagggagag
gagggaaacgaaaggGTCTTGCCTGAATCGTTGGAGCAAATCCTGCAGCG
CTGTCGTTCCCTCAAGGCCGATCTGCTGACGGCCGTAGAttgtgaagagg
aaagagagctATCCCTGGGAGAAACGCCGCAGAAGAAACGCGAGGTCTCC
AAGACGGCGAAgcggacaaagaggaaggtgccAAGGAAGGAAACAGCATG
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