|
|
Properties
| Property Name | Value |
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100024g42.4322.mrna |
| Orig protein id | gnl|cribi|Naga_100024g42.4322 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002457.1 | supercontig | CM002457.1:1015770..1019365 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1593 ID=rna1593|Name=rna1593|organism=Nannochloropsis gaditana|type=mRNA|length=2639bp AAGATAATCCCATCGAACTACCACACTAGCAGCTCGATTCTTCAACGAAT GCTTTTTATCAAAGATAGAACTTCCCGCTCTTACACCAGTAGCACCTTTT ATGCTATAATCACAGGTAGTGTTACGCAAAGAAAGCCTGACAAACTCCTG TGATATCATCACGCTGGGATGATCAACAGCACTTCCCTCTGCTGCTGCGA GCTCGTCCGCACCACGTACCGTACTCAAAGTCTAGCGAATGAAAGTAGGG AAATTAGCCTTTTTGCTCTGCCTCTTAATTTTTTGGTATTTTCCTCGGCC TTTCACCTCTGTCGAGACACCCGAGACGCATGACGTAAACGGTGCTATGA ATCTTGACATGAAAGACGAGCGACGCCCTCCTTCAGCAAAACTCGCCATT GGCGGCAAAGATGAGCAGGTGGAAGGATGCTTCAACAATTTTATTGCGAA ATTCGCTGTCTCACTGGCACAGAATAATTTTAGCAACCTACGATGTCAAG CCATTTGCACTGAGCGCGGGTACGCGTTAGCAGCAACGGGTGGAGGATCA CAAAGCATATGCTGGTGTGGAAATGACTACCCAGGTTTGCCACACGAAGT AGACACATTTCGTTGTGATCGTCCCTGTAGTCTAGACAAGAAAACATGCC ATTTATTTACATGTTGTGGAGACCGGAACGGATCGCTCTTCACCATCAGT TGGAATGGAGAGGTAAACCCAGTAAAACATCTTCTGGGACGTTTGTCGGA AGAATACAGGAGCAGCACTATTTTTCGTCAGAATATAATCAATGACTATT TACTATCTGACAACAGATCTTCTTTTCAACTTTGCGCGTCGGATAAGCTA CCTGAGAATCCACCGCTGTACCTCAGCGTCGGCAACGGTTGCCCTGTAGG ATGGTGCAAGCGAGACGGTTGGTGCTACAAACAGCATTGGGCCGACCCAT CAACCTACGACGAAGCTCAAGACAAATGCCAGCTTGAGGGAGGGGAGTTG GTGAATGTCAGATCGAGTGTACAGAACGCCTTTGTCTTGAGTCTTTATGC TGGCTGTCTAGGGTGGCTGCATATCGAATCCTATTATGAAGGGGCCACTT TGCACATCGATCAAAACTTTGGAGAAATATCACACCTACAATTGAAACCT GACGGCTCTTGGATCGCACTTCCGGGCTATGACAGCGATAGGCGGGTCGC TTGTTTCGCATGTCAAAAGGCCTGTACGCCACCCTTCCCCGCGCTGCGTC CCCACGAGGCTGACGAGTGGGACATCGAGATCTCGGCGTATCCATCAAGC ACCTACGCTTGGTGTACGGATTGTGCTGACAGCTACTTGAAAAACGTAAA TACACATTTATATCTCTGTGTGGACGATCAGTATCATCTATATTTATCGA TGCAGCCAGAATCCTCATGGTGCATTTGGACCATAAAAATAGACCCCGAC ACCGGCGCTATAACCTTTCTTTCTCATCACAATGCAATTTTGACGTACCA AGCTGAAAGAAATGAGCTCACATGTCGTTCGTTGCCGTCGATGTATCATG TATCACGATCATTTGTGTCGCGGAACCATCTCATGTTCGATGGGTCATTC CTGAACGCTCCGGACGGCCTGGCTATCTTCAATCCTAGCAGCCTGCCGCT CTCGATTAAAGAGCACTACCTACGTATTGCTGTCCACAGCCTCAATCGAC GATCGAAGTCTGCATTCATCGCGCCAAGGGGTTTACAGGAATGTTCCATG GCTGTCTGGGATATGAGCCCACAAAGCGATACATTTATGTGCAGACCACT AGTTGTAGACAACGCCGACATCGGAGTCCTTGGTAGTGCAGCCACTATCT CGCCGCTTGTATTCAAGCAAAAAGCTTTACATGTGTATGATCAGAGTTCC TACGTCACAGCACGTGAGCCTTTGCCGAACGGACGGGTAACCTGCTTGAA TCAAAACCCCACTGAGACTGTCAGCTGTGTTTTGGCCTACGGACGGGCAA TAATCCTTATCCGGCGATTTCGGACGAATTTTGGGATTCTTTTATTTGAT ACCGTTGCAGATCTTTTTCAAGTTTCGTCTGAACAAAAGCAAAGGTTCCG GTTTCAGACGGACCTTAAGACTAGAAGACCGGAAGGAAATGTTGTCGCAG GCAAAGAAAGAAGACGTTCCCGACCCAATGAAGTCGATTTCTTGAGTGAG CAAGGGAAGCTTGTCCAGAACGCGCTGACCGGCTCGTTTAATACATTCTA CCAATTTCTATTTTTCAAGGAATTGGTGGATGTCCGGACATGGCAACTTG GCATCAACGTGGCGCCCCTTACAGCTCTCACTATCCAATTATGGATGACA ACCCAATATTTAAAATATCGGTGGCGGGCCGTATTTCAACCGCGGGGCGG ATTTACCCTTACATTGTTCGGTCGGAGGCTGAGCGGCCAGAAAGGAGCAA CATTTTCCTTGGGAGACTTGGTTGTCTCCAATGATATTCTGTATTCAATG TACGGGTCCTATGAGGAGCCTGTAGAGGTAGCTTTAACTATGACTGACAG CGAGCATATTGAGCTATCGTACCTTGGTTTGCCTTTGCATCCTTGGAGCG ACAACGAGATGTGAAAGAAACAAAAGTGAGCTCCATAGC back to topprotein sequence of rna1593 >rna1593-protein ID=rna1593-protein|Name=rna1593|organism=Nannochloropsis gaditana|type=polypeptide|length=1057bp MATVRVAASASQSTSTSRTTRKRRRPPWRTMVFAASAILCPISAGVDAFV RSGVDPSFYQGSRLRSWHTLTFPRRSPPSERHCQFLFLREALLTLTASKE SNDGDDFKQESSARMSGRGVSSYFLTHSTLAPPHASLHPPLLLDDERQAA IVSKLAKEGYLKQAVKLLSNLKAPSPLLVRTLLMACVNAESLPLALAVVK MPHVHPSVQQYTLVIQICARQERWFEAVRLLRDMRTRGAPPDLVAYTAVM DCCAKAGQWEAALTLIPEMKEAGVRPDRITYNTAIDACAKGGQWQRALEF LRGMEEPNLISYNSALDSCAKTGRWKEAVGLLEEMRQAGRRKDGRGSTVS DQTQEVGANQGNTTNTIPGNRGSKPSIRPNIISYNTAIEACAKRGRFEEA LAILRSMQVPDTEKAGGHVPLPSASKKRNGASHHRRHQRLVPEPDLVTYH SAIKACGHAGQWEHALSLLAEVRAARWIELEPSTYNAAIAACAKSGRFNE ALDLLKECGDASNVVTYNSAMQACSSGGRPDLAFQLLQVMKANGVEPDVV SYTTVMQRSSVDVATSVLNRMRAAGVSVGVMTYNALLNACAREGDWRTSL AMLEEMDHQSVAPNVVTYTLAMEACGRGGQWQAALEVLNEMTVRGVPLDS KACQTAIDVCAKVQDWNKALSLLRDVSAQGRDGIGDQGSGKGGTKELYEK AMAAFGRAGEWEKVLWLLEGMDRPDQKVTNLAMRACAQAGRWEEAVGLLQ NMTSKGIAPDQWSYNTAIHACAQAGNAEKALKLLKEMGQEGVVPDVVSYT TAMDACASVGDVETSLRLLEEMVKKGVHPNHRSFNAIMSAHGNAGQATEA IAVLGLMTEHGLTPDVKSYTLAMDICLRQGLWQVALKIVERMHATRVRFD AISYGKAIHAAHLGEQWEVAVGFLDEMVESGWLPSHKSYTLVVEACRRAG ESRLAEEVSRRWARDKESLARANRRRGGKGLADTRRRDNRGKSNSEGRKH GTSPIENQPESSRGNKDSARVDTTRGSSSATVSITNHVSHPPPSSGLGPQ FPFQTKR back to topmRNA from alignment at CM002457.1:1015770..1019365- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1593 ID=rna1593|Name=rna1593|organism=Nannochloropsis gaditana|type=mRNA|length=3596bp|location=Sequence derived from alignment at CM002457.1:1015770..1019365- (Nannochloropsis gaditana) AAATGCCACTCACGTATTGTAACACCCTAAAACAGATACAATTTAGACGA
CCATGACATGGTCATGAAGACACGCGGAGTTAGTGGGGATGCTCTTCGAT
CGTAAACTTCGTGTGTGAACTTTGATGGCCACTGTCAGGGTTGCAGCCTC
GGCGTCTCAGTCAACATCAACCAGCCGCACAACCCGGAAACGCCGCCGTC
CCCCATGGCGCACAATGGTTTTCGCAGCTTCAGCCATACTATGTCCTATT
TCAGCGGGTGTGGATGCATTTGTCCGGTCAGGAGTTGATCCATCATTTTA
CCAAGGCTCACGGCTCAGGTCTTGGCACACCCTCACATTCCCGCGACGAT
CTCCTCCAAGTGAACGACATTGCCAATTTCTTTTCCTGCGTGAGGCTTTG
CTAACGCTGACTGCATCCAAAGAGTCGAATGATGGCGATGATTTCAAGCA
GGAATCAAGTGCAAGGATGTCGGGTCGAGGTGTATCATCGTATTTTCTCA
CTCACAGCACGCTCGCCCCGCCGCACGCCTCGTTGCATCCTCCTTTGCTT
CTCGACGACGAGCGTCAAGCCGCCATAGTGAGCAAGCTGGCAAAAGAAGG
ATATCTCAAGCAAGCTGTCAAGCTTTTGTCCAATTTAAAGGCTCCATCTC
CCCTCCTTGTGCGAACCCTTTTGATGGCATGTGTAAATGCGGAGAGCTTA
CCCTTGGCCCTTGCTGTGGTGAAAATGCCGCACGTGCATCCCTCCGTGCA
GCAATACACCTTAGTCATCCAAATTTGTGCTCGGCAGGAGAGATGGTTTG
AGGCCGTGCGCCTTCTGCGCGACATGCGGACCCGAGGGGCACCGCCCGAC
CTGGTCGCTTACACCGCCGTGATGGATTGTTGCGCCAAGGCGGGCCAGTG
GGAGGCAGCCCTGACGCTCATCCCTGAAATGAAGGAAGCGGGTGTTCGGC
CTGATCGTATCACGTATAACACGGCCATTGATGCATGCGCGAAGGGGGGG
CAATGGCAGAGAGCTTTGGAATTTTTGCGTGGGATGGAGGAACCTAATTT
GATCAGCTACAACAGTGCGTTGGATTCTTGCGCTAAGACAGGCCGATGGA
AGGAGGCAGTAGGGCTGTTGGAGGAAATGCGGCAGGCAGGCAGGAGGAAA
GACGGTAGGGGGAGCACGGTCAGCGACCAGACGCAAGAAGTCGGCGCCAA
CCAGGGCAACACCACCAACACCATCCCCGGCAATCGAGGTAGCAAGCCGT
CCATCCGGCCCAACATTATCTCCTACAACACCGCAATAGAGGCCTGCGCT
AAAAGGGGCCGCTTCGAAGAAGCCCTGGCCATCCTGAGATCCATGCAGGT
CCCCGACACGGAGAAGGCGGGGGGGCATGTGCCTCTCCCCAGCGCGAGTA
AGAAGCGCAACGGAGCCTCCCATCACCGCCGCCACCAACGTCTTGTGCCA
GAACCGGACCTGGTCACGTACCATTCCGCGATCAAAGCATGTGGACATGC
TGGGCAGTGGGAACATGCCTTAAGCCTCCTTGCCGAGGTGCGTGCCGCTC
GATGGATTGAGCTGGAGCCCTCCACCTATAATGCTGCCATCGCGGCTTGC
GCCAAATCTGGTCGATTCAACGAGGCGCTGGACTTGTTGAAGGAATGTGG
AGATGCCAGCAATGTCGTGACTTACAACTCAGCCATGCAGGCTTGCTCCT
CGGGTGGGCGGCCGGACCTCGCCTTCCAGCTGTTGCAGGTGATGAAGGCC
AATGGAGTGGAGCCCGACGTGGTAAGTTACACTACCGTCATGCAACGTTC
CTCGGTCGACGTAGCTACAAGTGTCCTCAATCGTATGCGTGCAGCGGGCG
TGAGCGTGGGGGTTATGACCTACAACGCGCTTTTGAATGCCTGTGCTCGG
GAGGGCGATTGGCGGACGAGCCTCGCGATGCTGGAGGAGATGGATCATCA
GTCTGTGGCCCCCAACGTCGTGACTTACACCCTGGCCATGGAAGCGTGTG
GCCGAGGGGGGCAATGGCAAGCGGCACTGGAGGTATTGAACGAGATGACC
GTGCGTGGCGTCCCGTTGGACTCGAAGGCTTGCCAGACGGCCATCGACGT
GTGCGCCAAGGTCCAGGACTGGAACAAGGCACTGAGTCTCCTCAGGGACG
TGAGTGCGCAGGGCAGAGATGGAATAGGAGACCAGGGCAGCGGCAAAGGG
GGTACGAAGGAATTGTACGAGAAAGCCATGGCTGCGTTCGGGCGGGCGGG
GGAATGGGAGAAAGTCTTGTGGCTGCTTGAAGGAATGGATCGTCCTGATC
AGAAAGTGACCAACCTGGCAATGCGAGCATGTGCTCAGGCGGGAAGATGG
GAGGAAGCTGTCGGCCTTCTGCAGAATATGACGAGCAAGGGCATTGCTCC
AGACCAATGGAGCTACAACACGGCCATCCATGCCTGTGCACAGGCCGGAA
ATGCCGAAAAAGCCTTGAAACTGTTGAAGGAAATGGGCCAAGAAGGCGTC
GTTCCTGACGTGGTAAGCTATACGACTGCCATGGATGCATGTGCCTCGGT
AGGAGACGTGGAAACAAGTCTCCGGCTTTTGGAAGAGATGGTGAAGAAGG
GTGTCCACCCCAACCATCGGAGCTTCAATGCCATTATGAGTGCGCATGGG
AATGCAGGCCAGGCCACCGAAGCCATTGCTGTGCTGGGTCTGATGACTGA
GCATGGGCTGACCCCGGACGTGAAGAGCTACACTCTGGCCATGGACATAT
GTCTGCGTCAAGGCCTGTGGCAAGTTGCTCTCAAAATCGTGGAACGCATG
CATGCAACGCGGGTGCGCTTTGATGCGATTTCTTACGGCAAGGCTATCCA
CGCGGCCCATTTGGGCGAACAATGGGAGGTCGCGGTGGGGTTTTTGGATG
AAATGGTGGAAAGTGGTTGGCTTCCGAGTCATAAAAGCTATACCCTAGTG
GTCGAGGCATGCCGGCGAGCGGGAGAGTCGAGGCTGGCCGAAGAGGTAAG
TAGACGCTGGGCGCGTGATAAAGAAAGCTTGGCGCGAGCGAATCGTCGGC
GTGGGGGAAAAGGATTGGCAGACACTCGGCGACGCGATAACCGAGGAAAG
TCTAATTCTGAGGGACGAAAACATGGGACAAGTCCGATTGAAAATCAGCC
CGAAAGCAGCCGTGGAAACAAGGATAGCGCGCGAGTGGACACAACGAGAG
GCTCTTCTTCTGCCACAGTGAGCATCACCAACCATGTGAGCCATCCACCA
CCATCCTCGGGCCTGGGTCCGCAATTTCCGTTTCAAACGAAACGATGACA
TGAATCGAGATGCGCTGGCTTGGCAAAGGGATGCATGATATCTCAGAGGG
GTAAAGTACAAACATAGATAACCGAAAATCGTAGAAGATGACAATTTTAT
CGACGAAAACTTTCACGGCAACTGGAGGTAATAAGCTATAAAATGGCAAA
AAATCGAAAGATAAGTGAAAAACCGTTTGTGTACGATTTAAGCTGGTGGA
GATCAGAGAAATGTGTGGTCATGCGACAGGAATTCAACATGCTGGTTTGT
TCTCGCTAATTAACATAAATGAAGAATTCTGGCCGCTCAGATTTTC back to topCoding sequence (CDS) from alignment at CM002457.1:1015770..1019365- >rna1593 ID=rna1593|Name=rna1593|organism=Nannochloropsis gaditana|type=CDS|length=3174bp|location=Sequence derived from alignment at CM002457.1:1015770..1019365- (Nannochloropsis gaditana) ATGGCCACTGTCAGGGTTGCAGCCTCGGCGTCTCAGTCAACATCAACCAG CCGCACAACCCGGAAACGCCGCCGTCCCCCATGGCGCACAATGGTTTTCG CAGCTTCAGCCATACTATGTCCTATTTCAGCGGGTGTGGATGCATTTGTC CGGTCAGGAGTTGATCCATCATTTTACCAAGGCTCACGGCTCAGGTCTTG GCACACCCTCACATTCCCGCGACGATCTCCTCCAAGTGAACGACATTGCC AATTTCTTTTCCTGCGTGAGGCTTTGCTAACGCTGACTGCATCCAAAGAG TCGAATGATGGCGATGATTTCAAGCAGGAATCAAGTGCAAGGATGTCGGG TCGAGGTGTATCATCGTATTTTCTCACTCACAGCACGCTCGCCCCGCCGC ACGCCTCGTTGCATCCTCCTTTGCTTCTCGACGACGAGCGTCAAGCCGCC ATAGTGAGCAAGCTGGCAAAAGAAGGATATCTCAAGCAAGCTGTCAAGCT TTTGTCCAATTTAAAGGCTCCATCTCCCCTCCTTGTGCGAACCCTTTTGA TGGCATGTGTAAATGCGGAGAGCTTACCCTTGGCCCTTGCTGTGGTGAAA ATGCCGCACGTGCATCCCTCCGTGCAGCAATACACCTTAGTCATCCAAAT TTGTGCTCGGCAGGAGAGATGGTTTGAGGCCGTGCGCCTTCTGCGCGACA TGCGGACCCGAGGGGCACCGCCCGACCTGGTCGCTTACACCGCCGTGATG GATTGTTGCGCCAAGGCGGGCCAGTGGGAGGCAGCCCTGACGCTCATCCC TGAAATGAAGGAAGCGGGTGTTCGGCCTGATCGTATCACGTATAACACGG CCATTGATGCATGCGCGAAGGGGGGGCAATGGCAGAGAGCTTTGGAATTT TTGCGTGGGATGGAGGAACCTAATTTGATCAGCTACAACAGTGCGTTGGA TTCTTGCGCTAAGACAGGCCGATGGAAGGAGGCAGTAGGGCTGTTGGAGG AAATGCGGCAGGCAGGCAGGAGGAAAGACGGTAGGGGGAGCACGGTCAGC GACCAGACGCAAGAAGTCGGCGCCAACCAGGGCAACACCACCAACACCAT CCCCGGCAATCGAGGTAGCAAGCCGTCCATCCGGCCCAACATTATCTCCT ACAACACCGCAATAGAGGCCTGCGCTAAAAGGGGCCGCTTCGAAGAAGCC CTGGCCATCCTGAGATCCATGCAGGTCCCCGACACGGAGAAGGCGGGGGG GCATGTGCCTCTCCCCAGCGCGAGTAAGAAGCGCAACGGAGCCTCCCATC ACCGCCGCCACCAACGTCTTGTGCCAGAACCGGACCTGGTCACGTACCAT TCCGCGATCAAAGCATGTGGACATGCTGGGCAGTGGGAACATGCCTTAAG CCTCCTTGCCGAGGTGCGTGCCGCTCGATGGATTGAGCTGGAGCCCTCCA CCTATAATGCTGCCATCGCGGCTTGCGCCAAATCTGGTCGATTCAACGAG GCGCTGGACTTGTTGAAGGAATGTGGAGATGCCAGCAATGTCGTGACTTA CAACTCAGCCATGCAGGCTTGCTCCTCGGGTGGGCGGCCGGACCTCGCCT TCCAGCTGTTGCAGGTGATGAAGGCCAATGGAGTGGAGCCCGACGTGGTA AGTTACACTACCGTCATGCAACGTTCCTCGGTCGACGTAGCTACAAGTGT CCTCAATCGTATGCGTGCAGCGGGCGTGAGCGTGGGGGTTATGACCTACA ACGCGCTTTTGAATGCCTGTGCTCGGGAGGGCGATTGGCGGACGAGCCTC GCGATGCTGGAGGAGATGGATCATCAGTCTGTGGCCCCCAACGTCGTGAC TTACACCCTGGCCATGGAAGCGTGTGGCCGAGGGGGGCAATGGCAAGCGG CACTGGAGGTATTGAACGAGATGACCGTGCGTGGCGTCCCGTTGGACTCG AAGGCTTGCCAGACGGCCATCGACGTGTGCGCCAAGGTCCAGGACTGGAA CAAGGCACTGAGTCTCCTCAGGGACGTGAGTGCGCAGGGCAGAGATGGAA TAGGAGACCAGGGCAGCGGCAAAGGGGGTACGAAGGAATTGTACGAGAAA GCCATGGCTGCGTTCGGGCGGGCGGGGGAATGGGAGAAAGTCTTGTGGCT GCTTGAAGGAATGGATCGTCCTGATCAGAAAGTGACCAACCTGGCAATGC GAGCATGTGCTCAGGCGGGAAGATGGGAGGAAGCTGTCGGCCTTCTGCAG AATATGACGAGCAAGGGCATTGCTCCAGACCAATGGAGCTACAACACGGC CATCCATGCCTGTGCACAGGCCGGAAATGCCGAAAAAGCCTTGAAACTGT TGAAGGAAATGGGCCAAGAAGGCGTCGTTCCTGACGTGGTAAGCTATACG ACTGCCATGGATGCATGTGCCTCGGTAGGAGACGTGGAAACAAGTCTCCG GCTTTTGGAAGAGATGGTGAAGAAGGGTGTCCACCCCAACCATCGGAGCT TCAATGCCATTATGAGTGCGCATGGGAATGCAGGCCAGGCCACCGAAGCC ATTGCTGTGCTGGGTCTGATGACTGAGCATGGGCTGACCCCGGACGTGAA GAGCTACACTCTGGCCATGGACATATGTCTGCGTCAAGGCCTGTGGCAAG TTGCTCTCAAAATCGTGGAACGCATGCATGCAACGCGGGTGCGCTTTGAT GCGATTTCTTACGGCAAGGCTATCCACGCGGCCCATTTGGGCGAACAATG GGAGGTCGCGGTGGGGTTTTTGGATGAAATGGTGGAAAGTGGTTGGCTTC CGAGTCATAAAAGCTATACCCTAGTGGTCGAGGCATGCCGGCGAGCGGGA GAGTCGAGGCTGGCCGAAGAGGTAAGTAGACGCTGGGCGCGTGATAAAGA AAGCTTGGCGCGAGCGAATCGTCGGCGTGGGGGAAAAGGATTGGCAGACA CTCGGCGACGCGATAACCGAGGAAAGTCTAATTCTGAGGGACGAAAACAT GGGACAAGTCCGATTGAAAATCAGCCCGAAAGCAGCCGTGGAAACAAGGA TAGCGCGCGAGTGGACACAACGAGAGGCTCTTCTTCTGCCACAGTGAGCA TCACCAACCATGTGAGCCATCCACCACCATCCTCGGGCCTGGGTCCGCAA TTTCCGTTTCAAACGAAACGATGA back to top
|