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Properties
| Property Name | Value |
|---|
| Product | phosphatidylinositol-4-phosphate 5-kinase its3 |
| Orig transcript id | gnl|cribi|Naga_100007g20.6537.mrna |
| Orig protein id | gnl|cribi|Naga_100007g20.6537 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:920174..922938 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1552 ID=rna1552|Name=rna1552|organism=Nannochloropsis gaditana|type=mRNA|length=2385bp
ATGGATCTCGAGGCGCCTCCAAGCGAGCTCGAAATCCCTTCCGCGTCGCA
ATTTTTGGCGGCCTTCTACCCCGCCATCGCGACTGCAATTATATGCTTGG
TTGCTTTCCCATTACTGCGACCGCATTCCCCGGATGTTTACGACGCCAAA
CGGGAGCGCGTGCGTCTAGGTGGCTCCACGCACCAACGCGGAGACTTGGC
AAATATACCTCCCGAGCTGCCCAAATTTACCGTGGACTGGCTTCGGCTCT
TGGCTTCTTTTTCCGACGACGACATACTTCGCTTCGTGGGCGCGGACGGC
CTGATGTTTATCCGCTATCTGCGCGTATGCTTTCAAGCCTCCTGCCTCAT
GCTCGTGTACGGACTCTGCGTCCTCGTTCCTATCAACGCCTCTGGCACGA
ACAAAGCGACGCAGTTCGAGAGATTTTCAGCTTCTAATGTCGCAGACGGA
TCCCAAACACTGTGGGCTCACTTCGCGGGAGCCTATCTGTTCTCTTTCCT
CCTTATGTACCTTCTTTACCGGGAGTACCAGAGATACGTTGAACTGCGAC
AGCAGTACATGAAGTCCCCCACTGTGCAGTCCTACTCGATCGTGATCCGT
GACATTCCCAAGGACGTGGACCAAGACACGGTGGAGCGGTATCTGACAAG
CCTCCTTGGGGACGAGTCCATCGCGATCCACTTGGTGGAGGACCCCCGTC
CCTACGACAAGCTGATCGAGGAGAAGGACCGCGCGCTCTTCGGCCTGGAA
AGCGCGCGGGCCAAAATGGCGCGAAACCCAACAGCGCGGCCCATGCACAA
AGTGGGGTTTATGGGCTTGTGGGGGGAGAAGGTGGATAGCCTGGGGCACT
ACGAAAAGGAGGTAGCGGAGGTGAACGGGCGAATCAAGGAGCTGCGAAGC
AAGGAGCAGGGCTTCGCACACGCGGCCATCGTCACCTTCGAGACGATCCG
GGTAGCCACTGCCTTTCAGAACATACCCATGCAGCAGCAGGTGCGGTTCA
TGAAGGTCTTGCCCGCGCCCGCCCGCACGGACCTGCTTTGGGGGAACCTC
GGGGAGCCGGCCGTGGCCCGCTGGGTCCGAAGCCTCCTGGTGGCCGGCGT
CGTCTTCTTCGTGATCTTCTGCTACATCATCCCCATCACTTTCGTGGCCT
CCCTGGCGAACCTGAACGCGCTGGCTCGGACCAAGGGCCTGGGCTGGTTG
CAGCCTGTGGCCGACTACAACCCCGACTTCACCGCCTTTCTGCAGGGTTT
CGTGCCCCCCCTCATCACCTCCATCTTCTTCTCGATGGTCCCCACCCTGA
TGGCCTTTCTGGCGCGGCAGGAGAGCCTGCCTGCGGAGTCGGACGTGCAG
AGTACGGCTATCTGGTACGTATTCCTCTTCGTCCTCTTCGACTACTTCTT
AGTCTACACCATCGCAGGGTCCGTGGCCGCCAAGATGGACCTGCTCAAGC
ACTACGCCGAGTCCCCCGCCGAGATCGTCAACCTCTTCGCCACCTCCCTC
CCCGCTCAGTCCACCTTCTTCATGAATCTCATCATGCTTGCGGCCCTCTC
CATGCAGCCCATCGAGCTCCTGCGCGTAGGCCCCCTCTTTGTCACCAAAC
TCAAACGCCGCTTCCTCGCCTCCTCCATCTACGACCACCTGCGGGCCATG
ACCGACGACGTCTACTTCCACGAGCTCTACGCCTTCCCGATGCTCGTCTT
CCTCGTCATGTGCGCCTACGCCTCCCTGGCCCCCTTCCTCATGGTCTTCG
TCCTCGCCTACTACGGGATCAGCTACGTGGTCAGCCTGAACCAGCTCCTT
TACATCTACAACGTCCCCTTCCACACGGGCGCCAAGCAATTCCCGACCGT
CTTCCGCTGCTCCATGGTGGCCATCGTCATCTCCCAGCTCCTCATGATAG
GCGTGCTGGGCCTGAAGCGCATGGCCATCCCCTCCACCCTCATGATCCCC
CTGGTCGCCTTCACGGTCTGGTGGGGCTACGAAATGTCGCACCAGTTCCG
CTTCGTCGGCAACACGCTCACCCTCGAGAACCTCCTTGCCACGGATTCCG
CGGACATGCCGACCGACACCCGCGAGGCCCTCAAGCAGGCGTACCAGCTG
CACCAGGACGCGGGGGAGGGCATGGAGCTTTCGCACAAGGCCCTGCAGCC
TCTGACGGAGCCCTTCGCCATCACGCGCGACGGGCTGCTGGACAGCTTGG
TGGAGGGGTCGGACGATGTGGAGCTGGGGGAGGAGGCGAAGGAGGAAGGG
ATGCCGCGGCCCTTGGGGAGGGAAAGAAAGGGTGAAGAGGGAACGGGGGC
CGAGAAGGGACTGCTGGAGAAGCTGACAGCGAGGGGCAGCCAAATTTTGA
ACATGGCAAAACGCGAGAGTAACGGCGGGAAGTAA back to topprotein sequence of rna1552 >rna1552-protein ID=rna1552-protein|Name=rna1552|organism=Nannochloropsis gaditana|type=polypeptide|length=586bp
MGPDVSLGCRATCQNAKNLSCSHCVSATIAQEAVKALTTMDVQNLDLQLD
SRTEALHLKIENHKRSTLKQTAVPSQAFIHEQPTGASVGSMLREGAPCAE
VKEESLKDVGVEGGDEKGDSQYLVKGRTQGLRLAECEIIPSGGEAQSGNE
KPGVASFETQIEIGKLAKVDNHVSGNSTRKDLALERALSHSMTVALHHKS
TDSPATKHHQSAFTHVHATDVTLDGIAFSFQEFAPTIFFSIRGHFGVDHD
AYVHSMSELRTGHTGEGKSGMLFFSSADGRLIVKTVTGDETKLLDRDLKS
YYDYMVVNGATSLLPRFMGLYLLKLPDKPLVRMLVMNNVLKLPRATKLTS
SIELSEIYDLKGSLHMRLVGAEEQALGEVTVLKDLNFCSRHAGTDHHGHS
FPGIEGPCRRVYLGPIRKIELLANLQSDVEWLKQHNIMDYSLLLAVGFEV
SPDGGLIAPPVKPADPVGTLAVVEDPCVGAGHPQMAASQEVPGGQQGERR
SRGTDGGRWESAWSTDMGGVRGMNGDFTPRAEIYYMGLIDVLQEYNAKKR
AEHALKSITADSSKISSVDPSFYAERFLDWLQTHVG back to topmRNA from alignment at CM002457.1:920174..922938+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1552 ID=rna1552|Name=rna1552|organism=Nannochloropsis gaditana|type=mRNA|length=2765bp|location=Sequence derived from alignment at CM002457.1:920174..922938+ (Nannochloropsis gaditana)
TAAGGATCAGCATGGCATATCCTCGTGCAAAATTCCACATTTCGACCAAA
CTTTTTTTAGGTTTGGATTTCTGTTGTGGACCGGAGTGTTCTTGAGTGAA
TGCTCCATATTATCCGATACTGGAATTTTCTTTTGGTTGCTTTTGTCAGG
TGTTTGTCCTGTATTAGCGAGTGTCAGGGGTTGCGGGTTATAGAAGAAag
tcgggagggagatagTTCGCCTTGTTTTGTATATCCGGCACATGAACTTT
CATGTCGTGATATTTAGCGTGATTGACTGAACAAACCAAGATAGAAAATT
GAAAATTTCAAAACTTCAAAGTCGGTGACGTTACCCTACCTTAGATTCTT
GGAGTAGTATTAAGTATGACACACTCAACATCCTATAATACTAGACGATT
GTTTGGACACGGTCCTATCGTCCATATCTATGCCTTTCTTGTTTATATTT
GCGAACGAACGCGTGTTGTTCCAGTGAGCCTTTTCAATCAAATCTACTCA
ACGCATTCAGATAAGGACAAGGAAGCACGGGCCATCTCGATGAGCATGCC
TTCCTTGGCTGATGCATATGGCTTGAAGTACTGGAGAAAGTATTTCCCGT
AAAGAGGAACTCTAAAGTGAGTGTAAATATATTCTGCTTACCGTGGACAA
TTTACGATACACACTCCCAACGGGTACATTCACATCTGGCACACACAGTT
CCGAAGGAACAAGGATGGGACCAGACGTCTCTTTAGGATGTCGTGCGACT
TGCCAAAACGCCAAAAATCTAAGTTGCAGTCATTGTGTCAGCGCCACTAT
CGCACAAGAAGCTGTTAAAGCTTTGACAACTATGGATGTTCAGAATCTTG
ACCTACAGTTAGATTCTCGGACAGAAGCCTTGCACCTCAAGATCGAGAAC
CATAAACGCAGCACTTTGAAGCAGACCGCAGGTAAGGAAAGACAACGAGA
ACAATACAAGCTTCCGGAGTATTTGTGGATACTCAGTGCAACGCTCGGAT
GCTTCTGTGCCATTCAACAATCCAAACAAAGACCAAACCAAAGTTTTCTA
TCCTTTTACAGTACCATCCCAAGCCTTTATACACGAGCAACCGACAGGGG
CCTCTGTTGGTTCCATGCTGCGTGAAGGAGCACCATGTGCAGAAgtaaag
gaggaaagcctgaAGGATGTTGGGGTGGAAGGTGGAGATGAGAAGGGGGA
CTCGCAATACCTAGTTAAGGGCCGGACGCAAGGCTTGCGGCTAGCTGAGT
GTGAGATAATACCgtcgggtggggaggcgcaAAGCGGAAACGAAAAACCA
GGAGTCGCATCCTTTGAGACGCAAATAGAGATTGGTAAACTAGCGAAAGT
GGATAATCATGTGTCGGGGAACAGCACTCGGAAAGATTTGGCACTTGAGA
GGGCGCTCAGTCATTCTATGACAGTCGCTCTTCACCACAAATCTACCGAC
AGTCCCGCTACGAAACATCATCAGTCCGCTTTTACACACGTGCATGCTAC
AGACGTGACGCTTGACGGCATTGCCTTTTCATTCCAAGAATTCGCACCGA
CGATCTTTTTCTCAATCCGAGGGCATTTTGGTGTTGACCATGACGCATAT
GTGCATTCAATGTCGGAATTGAGGACCGGACACAccggagaagggaaaag
cggcatgctcttcttctcgaGCGCTGACGGACGCTTGATCGTGAAGACCG
TGACAGGGGACGAGACCAAGTTGTTGGACCGAGATCTCAAGTCGTACTAC
GACTACATGGTGGTGAATGGGGCTACCTCTCTTTTGCCTCGTTTTATGGG
GCTCTACTTGTTGAAACTGCCCGATAAGCCCCTCGTTCGCATGCTTGTGA
TGAACAACGTCCTTAAGCTGCCCCGTGCGACGAAGCTGACGTCGTCCATT
GAATTGTCCGAAATCTACGACTTAAAAGGCTCGCTCCATATGCGTCTCgt
tggggcggaggagcaggccctggGCGAGGTGACCGTCTTGAAAGACCTAA
ACTTCTGCAGCCGACATGCTGGTACGGATCATCACGGCCATTCCTTCCCT
GGCATCGAGGGGCCTTGTCGAAGGGTGTATCTGGGCCCGATTCGAAAGAT
TGAGCTGCTTGCGAATTTACAGTCCGACGTGGAGTGGCTGAAGCAGCATA
ATATCATGGATTACTCCCTCTTGCTCGCTGTGGGCTTCGAGGTCTCACCA
GATGGAGGCCTTATAGCTCCTCCGGTAAAGCCAGCCGATCCGGTCGGTAC
GCTTGCCGTGGTCGAGGACCCCTGCGTGGGAGCGGGCCACCCGCAGATGG
CGGCAAGCCAAGAAGTGCCGGGTGgacagcaaggagagaggcggagTAGG
GGgacggacggagggaggtgggaatCAGCGTGGAGTACGGACATGGGAGG
GGTCCGAGGGATGAACGGAGACTTCACCCCGAGGGCGGAGATCTACTACA
TGGGGCTAATCGACGTCTTGCAGGAATACAACGCCAAGAAACGGGCGGAG
CATGCCTTGAAGTCCATAACGGCTGACTCGAGCAAGATCTCCTCGGTGGA
TCCTTCCTTCTATGCCGAGCGCTTTCTGGATTGGTTGCAGACTCACGTTG
GCTAGGCTAGCGTTGTAACCATGTAGACTTTCCGGTCTCGGGACACGCAA
GGAAGTGCTGGAGAGCCTCAGATTTTAGAGGGCATTACACAAGCGCTAAA
ACTGCCCGGGGAGACGCCATGATTTTACATGGAGTGTAAATAATTATAAA
GATCTACTGATCGTC back to topCoding sequence (CDS) from alignment at CM002457.1:920174..922938+ >rna1552 ID=rna1552|Name=rna1552|organism=Nannochloropsis gaditana|type=CDS|length=3522bp|location=Sequence derived from alignment at CM002457.1:920174..922938+ (Nannochloropsis gaditana)
ATGGGACCAGACGTCTCTTTAGGATGTCGTGCGACTTGCCAAAACGCCAA
AAATCTAAGTTGCAGTCATTGTGTCAGCGCCACTATCGCACAAGAAGCTG
TTAAAGCTTTGACAACTATGGATGTTCAGAATCTTGACCTACAGTTAGAT
TCTCGGACAGAAGCCTTGCACCTCAAGATCGAGAACCATAAACGCAGCAC
TTTGAAGCAGACCGCAGTACCATCCCAAGCCTTTATACACGAGCAACCGA
CAGGGGCCTCTGTTGGTTCCATGCTGCGTGAAGGAGCACCATGTGCAGAA
gtaaaggaggaaagcctgaAGGATGTTGGGGTGGAAGGTGGAGATGAGAA
GGGGGACTCGCAATACCTAGTTAAGGGCCGGACGCAAGGCTTGCGGCTAG
CTGAGTGTGAGATAATACCgtcgggtggggaggcgcaAAGCGGAAACGAA
AAACCAGGAGTCGCATCCTTTGAGACGCAAATAGAGATTGGTAAACTAGC
GAAAGTGGATAATCATGTGTCGGGGAACAGCACTCGGAAAGATTTGGCAC
TTGAGAGGGCGCTCAGTCATTCTATGACAGTCGCTCTTCACCACAAATCT
ACCGACAGTCCCGCTACGAAACATCATCAGTCCGCTTTTACACACGTGCA
TGCTACAGACGTGACGCTTGACGGCATTGCCTTTTCATTCCAAGAATTCG
CACCGACGATCTTTTTCTCAATCCGAGGGCATTTTGGTGTTGACCATGAC
GCATATGTGCATTCAATGTCGGAATTGAGGACCGGACACAccggagaagg
gaaaagcggcatgctcttcttctcgaGCGCTGACGGACGCTTGATCGTGA
AGACCGTGACAGGGGACGAGACCAAGTTGTTGGACCGAGATCTCAAGTCG
TACTACGACTACATGGTGGTGAATGGGGCTACCTCTCTTTTGCCTCGTTT
TATGGGGCTCTACTTGTTGAAACTGCCCGATAAGCCCCTCGTTCGCATGC
TTGTGATGAACAACGTCCTTAAGCTGCCCCGTGCGACGAAGCTGACGTCG
TCCATTGAATTGTCCGAAATCTACGACTTAAAAGGCTCGCTCCATATGCG
TCTCgttggggcggaggagcaggccctggGCGAGGTGACCGTCTTGAAAG
ACCTAAACTTCTGCAGCCGACATGCTGGTACGGATCATCACGGCCATTCC
TTCCCTGGCATCGAGGGGCCTTGTCGAAGGGTGTATCTGGGCCCGATTCG
AAAGATTGAGCTGCTTGCGAATTTACAGTCCGACGTGGAGTGGCTGAAGC
AGCATAATATCATGGATTACTCCCTCTTGCTCGCTGTGGGCTTCGAGGTC
TCACCAGATGGAGGCCTTATAGCTCCTCCGGTAAAGCCAGCCGATCCGGT
CGGTACGCTTGCCGTGGTCGAGGACCCCTGCGTGGGAGCGGGCCACCCGC
AGATGGCGGCAAGCCAAGAAGTGCCGGGTGgacagcaaggagagaggcgg
agTAGGGGgacggacggagggaggtgggaatCAGCGTGGAGTACGGACAT
GGGAGGGGTCCGAGGGATGAACGGAGACTTCACCCCGAGGGCGGAGATCT
ACTACATGGGGCTAATCGACGTCTTGCAGGAATACAACGCCAAGAAACGG
GCGGAGCATGCCTTGAAGTCCATAACGGCTGACTCGAGCAAGATCTCCTC
GGTGGATCCTTCCTTCTATGCCGAGCGCTTTCTGGATTGGTTGCAGACTC
ACGTTGGCTAGATGGGACCAGACGTCTCTTTAGGATGTCGTGCGACTTGC
CAAAACGCCAAAAATCTAAGTTGCAGTCATTGTGTCAGCGCCACTATCGC
ACAAGAAGCTGTTAAAGCTTTGACAACTATGGATGTTCAGAATCTTGACC
TACAGTTAGATTCTCGGACAGAAGCCTTGCACCTCAAGATCGAGAACCAT
AAACGCAGCACTTTGAAGCAGACCGCAGTACCATCCCAAGCCTTTATACA
CGAGCAACCGACAGGGGCCTCTGTTGGTTCCATGCTGCGTGAAGGAGCAC
CATGTGCAGAAgtaaaggaggaaagcctgaAGGATGTTGGGGTGGAAGGT
GGAGATGAGAAGGGGGACTCGCAATACCTAGTTAAGGGCCGGACGCAAGG
CTTGCGGCTAGCTGAGTGTGAGATAATACCgtcgggtggggaggcgcaAA
GCGGAAACGAAAAACCAGGAGTCGCATCCTTTGAGACGCAAATAGAGATT
GGTAAACTAGCGAAAGTGGATAATCATGTGTCGGGGAACAGCACTCGGAA
AGATTTGGCACTTGAGAGGGCGCTCAGTCATTCTATGACAGTCGCTCTTC
ACCACAAATCTACCGACAGTCCCGCTACGAAACATCATCAGTCCGCTTTT
ACACACGTGCATGCTACAGACGTGACGCTTGACGGCATTGCCTTTTCATT
CCAAGAATTCGCACCGACGATCTTTTTCTCAATCCGAGGGCATTTTGGTG
TTGACCATGACGCATATGTGCATTCAATGTCGGAATTGAGGACCGGACAC
AccggagaagggaaaagcggcatgctcttcttctcgaGCGCTGACGGACG
CTTGATCGTGAAGACCGTGACAGGGGACGAGACCAAGTTGTTGGACCGAG
ATCTCAAGTCGTACTACGACTACATGGTGGTGAATGGGGCTACCTCTCTT
TTGCCTCGTTTTATGGGGCTCTACTTGTTGAAACTGCCCGATAAGCCCCT
CGTTCGCATGCTTGTGATGAACAACGTCCTTAAGCTGCCCCGTGCGACGA
AGCTGACGTCGTCCATTGAATTGTCCGAAATCTACGACTTAAAAGGCTCG
CTCCATATGCGTCTCgttggggcggaggagcaggccctggGCGAGGTGAC
CGTCTTGAAAGACCTAAACTTCTGCAGCCGACATGCTGGTACGGATCATC
ACGGCCATTCCTTCCCTGGCATCGAGGGGCCTTGTCGAAGGGTGTATCTG
GGCCCGATTCGAAAGATTGAGCTGCTTGCGAATTTACAGTCCGACGTGGA
GTGGCTGAAGCAGCATAATATCATGGATTACTCCCTCTTGCTCGCTGTGG
GCTTCGAGGTCTCACCAGATGGAGGCCTTATAGCTCCTCCGGTAAAGCCA
GCCGATCCGGTCGGTACGCTTGCCGTGGTCGAGGACCCCTGCGTGGGAGC
GGGCCACCCGCAGATGGCGGCAAGCCAAGAAGTGCCGGGTGgacagcaag
gagagaggcggagTAGGGGgacggacggagggaggtgggaatCAGCGTGG
AGTACGGACATGGGAGGGGTCCGAGGGATGAACGGAGACTTCACCCCGAG
GGCGGAGATCTACTACATGGGGCTAATCGACGTCTTGCAGGAATACAACG
CCAAGAAACGGGCGGAGCATGCCTTGAAGTCCATAACGGCTGACTCGAGC
AAGATCTCCTCGGTGGATCCTTCCTTCTATGCCGAGCGCTTTCTGGATTG
GTTGCAGACTCACGTTGGCTAG back to top
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