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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g27.6454.mrna |
| Orig protein id | gnl|cribi|Naga_100007g27.6454 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:901499..902059 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1544 ID=rna1544|Name=rna1544|organism=Nannochloropsis gaditana|type=mRNA|length=2598bp
GCGTGCTCGATACTTATATCTTCGTGATTCTGTGCTGGTACAACCTCATA
TATTTTGCACGAAGTGGACTTGTACAGATCACTTCACAATCGGCAGGGTG
AAAACGCTGATGACGGCCCCGATACACACAAGCCCATAAGCAAGGAAGCT
AATCGCGACAAAAGAAAGTAGATGAAAGCTTCAAACTGTGCGTTGAAAAC
GTCTCTTTTTCTAAATTCTCAGAACAAAACTTTGGCGCCATAGCTCTTGG
CCGCAAGTTGCTATTTGCTGACAGCACTCGGGCGGAGTCATCAAGCTTCC
TTCTGCCCCTATATTTTGCACGTGCGGACAGCCATGCGGATCAGCGTCCT
CGTGTTCCTCTTCAGTGCAGTCGGCACGGCCCAAGCTGGTTTCTACCTAC
CTGGTGTCGCACCTAAGAGCTACGATGCCCGGGAAAATGTTCCCTTGAAA
GTCAACAAGGTCACTTCGACGAAAACTCAGATCCCTTACGAATACTATGA
TATCCCCTTCTGCCGCCCCCCCAAACGTCGCGGCGAAATGGAAAACTTGG
GCGAGGTTTTGGCTGGCGACGCCATCACCAATAGCCCTTATCAGCTCGAA
ATGAAGGTACCGAAATCCTGCGTAAAACTCTGCGCCAAAAGCTACACGGA
GAAGGAGATGAAGCTTTTCCGGGAGCTGATCGACGACAACTACCGTGTCC
ATTGGATCTTGGATTCCTTGCCAGCGGCCGTGCGCAACGACAAGTACAAT
TTCGTTTCTCGGGGGTTTCCGATCGGTTTTATCACCCCTCCGAATTACAA
TAACCCCAATGTCCACTGCTTGTTCAACCATGTGCGTCTCGTGGTGCTTT
ATAATGAAAACCCGGCGCACTTCAAGGGATCGCGCATTGTTGGGTTCGAA
GTAATCCCTTTCTCAGTCAAGCACAAATGGGACAGTAAAAACAAGGCTGT
CTTCGACACGGAAAAAACCGTGCTGGAGACCTGCAACGACCAAAGGCAAG
TCAGCCACGAGGTAGACGCCTTTCAGACGGTGGAGGGGGAGGGGGAGGTC
ATTTTCACGTACGACGTGGAGTGGAAGGAGTCCGATGTGCCCTGGTCGAG
CCGATGGGACGTGTATTTCTCCGGGAATCCGGACGATGAAATCCACTATT
TCTCCATCGTCAACTCCTTAATGATCGCCCTTTTCCTCACCGGAGTGGTG
GCCATGATCATGCTGCGGACCTTGCGCCAGGATATCAGCAACTACAACGA
GATGCAAACGCTTGAGGAGGCGCAGGAGGAAAGCGGATGGAAGCTGGTAC
ATGGCGACGTCTTTCGCCCCCCTCAGACATCTCCGATGCTCCTCGCGGTT
CTGGCCGGTTCCGGGGCCCAGCTCTTGGCCATGAGCACGGCCATCCTCAC
GTTCGCGTTGCTCGGATTCATGTCTCCCGCCAATCGCGGCGGCCTCCTCA
CCTCTCTGCTCCTGCTCTTCGTCTTCATGGGCTCCGTGGCCGGGTACTCG
TCGGCGCGCCTGTACAAGCTATTTGGCGGAAAGGACTGGCGGCGGAACAC
GATCCTGACCGCCACTGTCTTCCCGGGTGTGATTTTCGTCATGTTTTCGA
TCCTAAATGTGGTCGCTATGCTGGAGAATTCGTCCACGGCCGTGCCCTTC
GTGTGGGTGCTTTGCCTTCTCGTTCTCTGGCTCGGCGTCTCCAGCCCGCT
TGTATTTGTAGGTTCCTACTTTGGTTTTAAGCGGGAGGTGTTGGGAATGC
CTACCCGGACAAACCAGATCGCGAGGCACATCCCAGAACGACAATGGTGG
GGCCACCCTCTTCTCTGCATTGCCGTCGGAGGCATTTTGCCCTTCGGTGC
TGTATGCATCGAGCTGTTCTTCATCATGTCGGCGTTGTGGCTCCATCAAA
TTTACTACGTTTTTGGGTTTCTCATCTGTGTCTTCTTCATTATGGGCATC
ACTTGCGCGGAGATTGCCATTGTTTTGACTTACTTCCAGCTCTGCAACGA
AGACTACCAGTGGTGGTGGAGGTCTTTTTTCACATCTGGGTCAACGGCGG
TGTATTTGTTCATCTACTCCATCTGGTACTTTGCAAGTAAGCTGCAGATT
GATGCAGCTGTCTCCATATTTATTTACTTCACGTACATGGGCATGATTTC
AATGGCTTTTTTCCTCATGACTGGAGCCATAGGCCTTTTTGCCTGTCTAT
GGTTTACCCGAACGATCTACGGAGCCATTAAAGTCGATTAAAGGGATCAA
TGTGTATGCGTATGATTGTGGAGGGAGCAAGAGGTAGATATGTATCGGAC
GTGCACGAACTGGTGTGCGAACGATGGTAGGAAAATATATGAAGTATACG
CGCGATCAAGAGGGAAACACATCGAAGGGGGGGAAAAGAAACATGCACTG
TTGTTCAGGAAAGCCCATGATATTTTTCCAGCTGTGATATAACGAGTGTT
CGGTTCCCACATTTCGACAAGGTCTTGGTTTTCTTCTCCATAATCGGCCC
ATTTCCCCCGAATACATTTCGGTGGAAAAGAGACATCTCCTTGCGAAGCC
TGGTGTGTCTCGGGGTAGGTAAAGAATAACAATATCCTGCAAGCTTGC back to topprotein sequence of rna1544 >rna1544-protein ID=rna1544-protein|Name=rna1544|organism=Nannochloropsis gaditana|type=polypeptide|length=186bp
MEAKLYDGTVVALQSAGARVLRPPAVETHDGNLSYTIRARHGIDLYEIHL
SSQRNFVLVRATQCPSAFDKGGSAANERLCTALDLTVPLIGQVYTLMLDI
NRYVVHLADGSTALVNETLLLANLNENIFGKFGLEALTTDLKLLESHALG
RRGLWGTGLSLPTTILYGGVAITVLAIVYLRFRRKK back to topmRNA from alignment at CM002457.1:901499..902059+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1544 ID=rna1544|Name=rna1544|organism=Nannochloropsis gaditana|type=mRNA|length=561bp|location=Sequence derived from alignment at CM002457.1:901499..902059+ (Nannochloropsis gaditana)
atggaggcgaagcTATATGACGGGACTGTCGTGGCATTGCAATCCGCGGG
AGCTCGCGTGCTGCGGCCGCCAGCAGTCGAGACTCATGACGGAAATCTCT
CCTACACCATTCGAGCGCGTCACGGGATAGATTTGTATGAAATTCATTTG
TCATCTCAGCGAAATTTCGTCCTCGTGCGCGCAACTCAGTGTCCATCTGC
ATTTGATAAAGGAGGGTCGGCGGCCAATGAGCGACTATGTACAGCTTTAG
ACTTGACAGTCCCTCTTATTGGCCAGGTGTATACGCTCATGTTGGACATA
AATCGGTATGTGGTACATTTAGCAGACGGTTCCACAGCCTTGGTCAACGA
GACATTACTTCTAGCGAATCTGAACGAGAACATTTTTGGCAAATTTGGCT
TAGAAGCGTTGACAACAGACCTTAAGCTGCTAGAATCACATGCCCTCGGA
AGACGAGGACTTTGGGGCACCGGATTGAGTTTGCCGACGACCATACTGTA
TGGAGGGGTCGCCATCACTGTGCTCGCTATAGTATATTTACGTTTTCGAC
GGAAGAAATGA back to topCoding sequence (CDS) from alignment at CM002457.1:901499..902059+ >rna1544 ID=rna1544|Name=rna1544|organism=Nannochloropsis gaditana|type=CDS|length=561bp|location=Sequence derived from alignment at CM002457.1:901499..902059+ (Nannochloropsis gaditana)
atggaggcgaagcTATATGACGGGACTGTCGTGGCATTGCAATCCGCGGG
AGCTCGCGTGCTGCGGCCGCCAGCAGTCGAGACTCATGACGGAAATCTCT
CCTACACCATTCGAGCGCGTCACGGGATAGATTTGTATGAAATTCATTTG
TCATCTCAGCGAAATTTCGTCCTCGTGCGCGCAACTCAGTGTCCATCTGC
ATTTGATAAAGGAGGGTCGGCGGCCAATGAGCGACTATGTACAGCTTTAG
ACTTGACAGTCCCTCTTATTGGCCAGGTGTATACGCTCATGTTGGACATA
AATCGGTATGTGGTACATTTAGCAGACGGTTCCACAGCCTTGGTCAACGA
GACATTACTTCTAGCGAATCTGAACGAGAACATTTTTGGCAAATTTGGCT
TAGAAGCGTTGACAACAGACCTTAAGCTGCTAGAATCACATGCCCTCGGA
AGACGAGGACTTTGGGGCACCGGATTGAGTTTGCCGACGACCATACTGTA
TGGAGGGGTCGCCATCACTGTGCTCGCTATAGTATATTTACGTTTTCGAC
GGAAGAAATGA back to top
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