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Properties
| Property Name | Value |
|---|
| Product | Nonaspanin (TM9SF) |
| Orig transcript id | gnl|cribi|Naga_100007g28.6463.mrna |
| Orig protein id | gnl|cribi|Naga_100007g28.6463 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:898039..901023 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of rna1543 >rna1543-protein ID=rna1543-protein|Name=rna1543|organism=Nannochloropsis gaditana|type=polypeptide|length=635bp
MRISVLVFLFSAVGTAQAGFYLPGVAPKSYDARENVPLKVNKVTSTKTQI
PYEYYDIPFCRPPKRRGEMENLGEVLAGDAITNSPYQLEMKVPKSCVKLC
AKSYTEKEMKLFRELIDDNYRVHWILDSLPAAVRNDKYNFVSRGFPIGFI
TPPNYNNPNVHCLFNHVRLVVLYNENPAHFKGSRIVGFEVIPFSVKHKWD
SKNKAVFDTEKTVLETCNDQRQVSHEVDAFQTVEGEGEVIFTYDVEWKES
DVPWSSRWDVYFSGNPDDEIHYFSIVNSLMIALFLTGVVAMIMLRTLRQD
ISNYNEMQTLEEAQEESGWKLVHGDVFRPPQTSPMLLAVLAGSGAQLLAM
STAILTFALLGFMSPANRGGLLTSLLLLFVFMGSVAGYSSARLYKLFGGK
DWRRNTILTATVFPGVIFVMFSILNVVAMLENSSTAVPFVWVLCLLVLWL
GVSSPLVFVGSYFGFKREVLGMPTRTNQIARHIPERQWWGHPLLCIAVGG
ILPFGAVCIELFFIMSALWLHQIYYVFGFLICVFFIMGITCAEIAIVLTY
FQLCNEDYQWWWRSFFTSGSTAVYLFIYSIWYFASKLQIDAAVSIFIYFT
YMGMISMAFFLMTGAIGLFACLWFTRTIYGAIKVD back to topmRNA from alignment at CM002457.1:898039..901023- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1543 ID=rna1543|Name=rna1543|organism=Nannochloropsis gaditana|type=mRNA|length=2985bp|location=Sequence derived from alignment at CM002457.1:898039..901023- (Nannochloropsis gaditana)
GCGTGCTCGATACTTATATCTTCGTGATTCTGTGCTGGTACAACCTCATA
TATTTTGCACGAAGTGGACTTGTACAGATCACTTCACAATCGGCAGGGTG
AAAACGCTGATGACGGCCCCGATACACACAAGCCCATAAGCAAGGAAGCT
AATCGCGACAAAAGAAAGTAGATGAAAGCTTCAAACTGTGCGTTGAAAAC
GTCTCTTTTTCTAAATTCTCAGAACAAAACTTTGGCGCCATAGCTCTTGG
CCGCAAGTTGCTATTTGCTGACAGCACTCGGGCGGAGTCATCAAGCTTCC
TTCTGCCCCTATATTTTGCACGTGCGGACAGCCATGCGGATCAGCGTCCT
CGTGTTCCTCTTCAGTGCAGTCGGCACGGCCCAAGCTGGTTTCTACCTAC
CTGGTGTCGCACCTAAGAGCTACGATGCCCGGGAAAATGTACGTGATGTA
GTAGGCTGAAAAGACGGGGGGGTAAATCGTATATTTCGCGTTGTGAAGAA
GCACTGAAATAGTATCTGACATGATACATACAGATGTACTTCTATTGTAA
GCGTCATGCATAAAAGTATTATCCTGAGCATCTCGCTGAGTCTTCTCAAG
ATAATACACCAGCTCACTCTTCGTAATTCTCGATCTCTAATTGCCTTTAA
TCATCAATACTCAAAACGCTTGAACGCCGGCGCGTATTTGATATTGCCAG
GTTCCCTTGAAAGTCAACAAGGTCACTTCGACGAAAACTCAGATCCCTTA
CGAATACTATGATATCCCCTTCTGCCGCCCCCCCAAACGTCGCGGCGAAA
TGGAAAACTTGGGCGAGGTTTTGGCTGGCGACGCCATCACCAATAGCCCT
TATCAGCTCGAAATGAAGGTACCGAAATCCTGCGTAAAACTCTGCGCCAA
AAGCTACACGGAGAAGGAGATGAAGCTTTTCCGGGAGCTGATCGACGACA
ACTACCGTGTCCATTGGATCTTGGATTCCTTGCCAGCGGCCGTGCGCAAC
GACAAGTACAATTTCGTTTCTCGGGGGTTTCCGATCGGTTTTATCACCCC
TCCGAATTACAATAACCCCAATGTCCACTGCTTGTTCAACCATGTGCGTC
TCGTGGTGCTTTATAATGAAAACCCGGCGCACTTCAAGGGATCGCGCATT
GTTGGGTTCGAAGTAATCCCTTTCTCAGTCAAGCACAAATGGGACAGTAA
AAACAAGGTAAGGAAGGCGTGGTGATGCACAAAAAAAGCTCCTTAGATTT
GGGAGTGTCCAACCGCTTCATCATCCTCGTCGCAGTCCGGACAAGAAGCA
CTGACCGAAATTCTTTCTCCCTCATCCGGCAGGCTGTCTTCGACACGGAA
AAAACCGTGCTGGAGACCTGCAACGACCAAAGGCAAGTCAGCCACGAGGT
AGACGCCTTTCAGACGGTGGAGGGGGAGGGGGAGGTCATTTTCACGTACG
ACGTGGAGTGGAAGGAGTCCGATGTGCCCTGGTCGAGCCGATGGGACGTG
TATTTCTCCGGGAATCCGGACGATGAAATCCACTATTTCTCCATCGTCAA
CTCCTTAATGATCGCCCTTTTCCTCACCGGAGTGGTGGCCATGATCATGC
TGCGGACCTTGCGCCAGGATATCAGCAACTACAACGAGATGCAAACGCTT
GAGGAGGCGCAGGAGGAAAGCGGATGGAAGCTGGTACATGGCGACGTCTT
TCGCCCCCCTCAGACATCTCCGATGCTCCTCGCGGTTCTGGCCGGTTCCG
GGGCCCAGCTCTTGGCCATGAGCACGGCCATCCTCACGTTCGCGTTGCTC
GGATTCATGTCTCCCGCCAATCGCGGCGGCCTCCTCACCTCTCTGCTCCT
GCTCTTCGTCTTCATGGGCTCCGTGGCCGGGTACTCGTCGGCGCGCCTGT
ACAAGCTATTTGGCGGAAAGGACTGGCGGCGGAACACGATCCTGACCGCC
ACTGTCTTCCCGGGTGTGATTTTCGTCATGTTTTCGATCCTAAATGTGGT
CGCTATGCTGGAGAATTCGTCCACGGCCGTGCCCTTCGTGTGGGTGCTTT
GCCTTCTCGTTCTCTGGCTCGGCGTCTCCAGCCCGCTTGTATTTGTAGGT
TCCTACTTTGGTTTTAAGCGGGAGGTGTTGGGAATGCCTACCCGGACAAA
CCAGATCGCGAGGCACATCCCAGAACGACAATGGTGGGGCCACCCTCTTC
TCTGCATTGCCGTCGGAGGCATTTTGCCCTTCGGTGCTGTATGCATCGAG
CTGTTCTTCATCATGTCGGCGTTGTGGCTCCATCAAATTTACTACGTTTT
TGGGTTTCTCATCTGTGTCTTCTTCATTATGGGCATCACTTGCGCGGAGA
TTGCCATTGTTTTGACTTACTTCCAGCTCTGCAACGAAGACTACCAGTGG
TGGTGGAGGTCTTTTTTCACATCTGGGTCAACGGCGGTGTATTTGTTCAT
CTACTCCATCTGGTACTTTGCAAGTAAGCTGCAGATTGATGCAGCTGTCT
CCATATTTATTTACTTCACGTACATGGGCATGATTTCAATGGCTTTTTTC
CTCATGACTGGAGCCATAGGCCTTTTTGCCTGTCTATGGTTTACCCGAAC
GATCTACGGAGCCATTAAAGTCGATTAAAGGGATCAATGTGTATGCGTAT
GATTGTGGAGGGAGCAAGAGGTAGATATGTATCGGACGTGCACGAACTGG
TGTGCGAACGATGGTAGGAAAATATATGAAGTATACGCGCGATCAAGAGG
GAAACACATCGAAGGGGGGGAAAAGAAACATGCACTGTTGTTCAGGAAAG
CCCATGATATTTTTCCAGCTGTGATATAACGAGTGTTCGGTTCCCACATT
TCGACAAGGTCTTGGTTTTCTTCTCCATAATCGGCCCATTTCCCCCGAAT
ACATTTCGGTGGAAAAGAGACATCTCCTTGCGAAGCCTGGTGTGTCTCGG
GGTAGGTAAAGAATAACAATATCCTGCAAGCTTGC back to topCoding sequence (CDS) from alignment at CM002457.1:898039..901023- >rna1543 ID=rna1543|Name=rna1543|organism=Nannochloropsis gaditana|type=CDS|length=5724bp|location=Sequence derived from alignment at CM002457.1:898039..901023- (Nannochloropsis gaditana)
GCTGTCTTCGACACGGAAAAAACCGTGCTGGAGACCTGCAACGACCAAAG
GCAAGTCAGCCACGAGGTAGACGCCTTTCAGACGGTGGAGGGGGAGGGGG
AGGTCATTTTCACGTACGACGTGGAGTGGAAGGAGTCCGATGTGCCCTGG
TCGAGCCGATGGGACGTGTATTTCTCCGGGAATCCGGACGATGAAATCCA
CTATTTCTCCATCGTCAACTCCTTAATGATCGCCCTTTTCCTCACCGGAG
TGGTGGCCATGATCATGCTGCGGACCTTGCGCCAGGATATCAGCAACTAC
AACGAGATGCAAACGCTTGAGGAGGCGCAGGAGGAAAGCGGATGGAAGCT
GGTACATGGCGACGTCTTTCGCCCCCCTCAGACATCTCCGATGCTCCTCG
CGGTTCTGGCCGGTTCCGGGGCCCAGCTCTTGGCCATGAGCACGGCCATC
CTCACGTTCGCGTTGCTCGGATTCATGTCTCCCGCCAATCGCGGCGGCCT
CCTCACCTCTCTGCTCCTGCTCTTCGTCTTCATGGGCTCCGTGGCCGGGT
ACTCGTCGGCGCGCCTGTACAAGCTATTTGGCGGAAAGGACTGGCGGCGG
AACACGATCCTGACCGCCACTGTCTTCCCGGGTGTGATTTTCGTCATGTT
TTCGATCCTAAATGTGGTCGCTATGCTGGAGAATTCGTCCACGGCCGTGC
CCTTCGTGTGGGTGCTTTGCCTTCTCGTTCTCTGGCTCGGCGTCTCCAGC
CCGCTTGTATTTGTAGGTTCCTACTTTGGTTTTAAGCGGGAGGTGTTGGG
AATGCCTACCCGGACAAACCAGATCGCGAGGCACATCCCAGAACGACAAT
GGTGGGGCCACCCTCTTCTCTGCATTGCCGTCGGAGGCATTTTGCCCTTC
GGTGCTGTATGCATCGAGCTGTTCTTCATCATGTCGGCGTTGTGGCTCCA
TCAAATTTACTACGTTTTTGGGTTTCTCATCTGTGTCTTCTTCATTATGG
GCATCACTTGCGCGGAGATTGCCATTGTTTTGACTTACTTCCAGCTCTGC
AACGAAGACTACCAGTGGTGGTGGAGGTCTTTTTTCACATCTGGGTCAAC
GGCGGTGTATTTGTTCATCTACTCCATCTGGTACTTTGCAAGTAAGCTGC
AGATTGATGCAGCTGTCTCCATATTTATTTACTTCACGTACATGGGCATG
ATTTCAATGGCTTTTTTCCTCATGACTGGAGCCATAGGCCTTTTTGCCTG
TCTATGGTTTACCCGAACGATCTACGGAGCCATTAAAGTCGATTAAGTTC
CCTTGAAAGTCAACAAGGTCACTTCGACGAAAACTCAGATCCCTTACGAA
TACTATGATATCCCCTTCTGCCGCCCCCCCAAACGTCGCGGCGAAATGGA
AAACTTGGGCGAGGTTTTGGCTGGCGACGCCATCACCAATAGCCCTTATC
AGCTCGAAATGAAGGTACCGAAATCCTGCGTAAAACTCTGCGCCAAAAGC
TACACGGAGAAGGAGATGAAGCTTTTCCGGGAGCTGATCGACGACAACTA
CCGTGTCCATTGGATCTTGGATTCCTTGCCAGCGGCCGTGCGCAACGACA
AGTACAATTTCGTTTCTCGGGGGTTTCCGATCGGTTTTATCACCCCTCCG
AATTACAATAACCCCAATGTCCACTGCTTGTTCAACCATGTGCGTCTCGT
GGTGCTTTATAATGAAAACCCGGCGCACTTCAAGGGATCGCGCATTGTTG
GGTTCGAAGTAATCCCTTTCTCAGTCAAGCACAAATGGGACAGTAAAAAC
AAGATGCGGATCAGCGTCCTCGTGTTCCTCTTCAGTGCAGTCGGCACGGC
CCAAGCTGGTTTCTACCTACCTGGTGTCGCACCTAAGAGCTACGATGCCC
GGGAAAATGCTGTCTTCGACACGGAAAAAACCGTGCTGGAGACCTGCAAC
GACCAAAGGCAAGTCAGCCACGAGGTAGACGCCTTTCAGACGGTGGAGGG
GGAGGGGGAGGTCATTTTCACGTACGACGTGGAGTGGAAGGAGTCCGATG
TGCCCTGGTCGAGCCGATGGGACGTGTATTTCTCCGGGAATCCGGACGAT
GAAATCCACTATTTCTCCATCGTCAACTCCTTAATGATCGCCCTTTTCCT
CACCGGAGTGGTGGCCATGATCATGCTGCGGACCTTGCGCCAGGATATCA
GCAACTACAACGAGATGCAAACGCTTGAGGAGGCGCAGGAGGAAAGCGGA
TGGAAGCTGGTACATGGCGACGTCTTTCGCCCCCCTCAGACATCTCCGAT
GCTCCTCGCGGTTCTGGCCGGTTCCGGGGCCCAGCTCTTGGCCATGAGCA
CGGCCATCCTCACGTTCGCGTTGCTCGGATTCATGTCTCCCGCCAATCGC
GGCGGCCTCCTCACCTCTCTGCTCCTGCTCTTCGTCTTCATGGGCTCCGT
GGCCGGGTACTCGTCGGCGCGCCTGTACAAGCTATTTGGCGGAAAGGACT
GGCGGCGGAACACGATCCTGACCGCCACTGTCTTCCCGGGTGTGATTTTC
GTCATGTTTTCGATCCTAAATGTGGTCGCTATGCTGGAGAATTCGTCCAC
GGCCGTGCCCTTCGTGTGGGTGCTTTGCCTTCTCGTTCTCTGGCTCGGCG
TCTCCAGCCCGCTTGTATTTGTAGGTTCCTACTTTGGTTTTAAGCGGGAG
GTGTTGGGAATGCCTACCCGGACAAACCAGATCGCGAGGCACATCCCAGA
ACGACAATGGTGGGGCCACCCTCTTCTCTGCATTGCCGTCGGAGGCATTT
TGCCCTTCGGTGCTGTATGCATCGAGCTGTTCTTCATCATGTCGGCGTTG
TGGCTCCATCAAATTTACTACGTTTTTGGGTTTCTCATCTGTGTCTTCTT
CATTATGGGCATCACTTGCGCGGAGATTGCCATTGTTTTGACTTACTTCC
AGCTCTGCAACGAAGACTACCAGTGGTGGTGGAGGTCTTTTTTCACATCT
GGGTCAACGGCGGTGTATTTGTTCATCTACTCCATCTGGTACTTTGCAAG
TAAGCTGCAGATTGATGCAGCTGTCTCCATATTTATTTACTTCACGTACA
TGGGCATGATTTCAATGGCTTTTTTCCTCATGACTGGAGCCATAGGCCTT
TTTGCCTGTCTATGGTTTACCCGAACGATCTACGGAGCCATTAAAGTCGA
TTAAGTTCCCTTGAAAGTCAACAAGGTCACTTCGACGAAAACTCAGATCC
CTTACGAATACTATGATATCCCCTTCTGCCGCCCCCCCAAACGTCGCGGC
GAAATGGAAAACTTGGGCGAGGTTTTGGCTGGCGACGCCATCACCAATAG
CCCTTATCAGCTCGAAATGAAGGTACCGAAATCCTGCGTAAAACTCTGCG
CCAAAAGCTACACGGAGAAGGAGATGAAGCTTTTCCGGGAGCTGATCGAC
GACAACTACCGTGTCCATTGGATCTTGGATTCCTTGCCAGCGGCCGTGCG
CAACGACAAGTACAATTTCGTTTCTCGGGGGTTTCCGATCGGTTTTATCA
CCCCTCCGAATTACAATAACCCCAATGTCCACTGCTTGTTCAACCATGTG
CGTCTCGTGGTGCTTTATAATGAAAACCCGGCGCACTTCAAGGGATCGCG
CATTGTTGGGTTCGAAGTAATCCCTTTCTCAGTCAAGCACAAATGGGACA
GTAAAAACAAGATGCGGATCAGCGTCCTCGTGTTCCTCTTCAGTGCAGTC
GGCACGGCCCAAGCTGGTTTCTACCTACCTGGTGTCGCACCTAAGAGCTA
CGATGCCCGGGAAAATGCTGTCTTCGACACGGAAAAAACCGTGCTGGAGA
CCTGCAACGACCAAAGGCAAGTCAGCCACGAGGTAGACGCCTTTCAGACG
GTGGAGGGGGAGGGGGAGGTCATTTTCACGTACGACGTGGAGTGGAAGGA
GTCCGATGTGCCCTGGTCGAGCCGATGGGACGTGTATTTCTCCGGGAATC
CGGACGATGAAATCCACTATTTCTCCATCGTCAACTCCTTAATGATCGCC
CTTTTCCTCACCGGAGTGGTGGCCATGATCATGCTGCGGACCTTGCGCCA
GGATATCAGCAACTACAACGAGATGCAAACGCTTGAGGAGGCGCAGGAGG
AAAGCGGATGGAAGCTGGTACATGGCGACGTCTTTCGCCCCCCTCAGACA
TCTCCGATGCTCCTCGCGGTTCTGGCCGGTTCCGGGGCCCAGCTCTTGGC
CATGAGCACGGCCATCCTCACGTTCGCGTTGCTCGGATTCATGTCTCCCG
CCAATCGCGGCGGCCTCCTCACCTCTCTGCTCCTGCTCTTCGTCTTCATG
GGCTCCGTGGCCGGGTACTCGTCGGCGCGCCTGTACAAGCTATTTGGCGG
AAAGGACTGGCGGCGGAACACGATCCTGACCGCCACTGTCTTCCCGGGTG
TGATTTTCGTCATGTTTTCGATCCTAAATGTGGTCGCTATGCTGGAGAAT
TCGTCCACGGCCGTGCCCTTCGTGTGGGTGCTTTGCCTTCTCGTTCTCTG
GCTCGGCGTCTCCAGCCCGCTTGTATTTGTAGGTTCCTACTTTGGTTTTA
AGCGGGAGGTGTTGGGAATGCCTACCCGGACAAACCAGATCGCGAGGCAC
ATCCCAGAACGACAATGGTGGGGCCACCCTCTTCTCTGCATTGCCGTCGG
AGGCATTTTGCCCTTCGGTGCTGTATGCATCGAGCTGTTCTTCATCATGT
CGGCGTTGTGGCTCCATCAAATTTACTACGTTTTTGGGTTTCTCATCTGT
GTCTTCTTCATTATGGGCATCACTTGCGCGGAGATTGCCATTGTTTTGAC
TTACTTCCAGCTCTGCAACGAAGACTACCAGTGGTGGTGGAGGTCTTTTT
TCACATCTGGGTCAACGGCGGTGTATTTGTTCATCTACTCCATCTGGTAC
TTTGCAAGTAAGCTGCAGATTGATGCAGCTGTCTCCATATTTATTTACTT
CACGTACATGGGCATGATTTCAATGGCTTTTTTCCTCATGACTGGAGCCA
TAGGCCTTTTTGCCTGTCTATGGTTTACCCGAACGATCTACGGAGCCATT
AAAGTCGATTAAGTTCCCTTGAAAGTCAACAAGGTCACTTCGACGAAAAC
TCAGATCCCTTACGAATACTATGATATCCCCTTCTGCCGCCCCCCCAAAC
GTCGCGGCGAAATGGAAAACTTGGGCGAGGTTTTGGCTGGCGACGCCATC
ACCAATAGCCCTTATCAGCTCGAAATGAAGGTACCGAAATCCTGCGTAAA
ACTCTGCGCCAAAAGCTACACGGAGAAGGAGATGAAGCTTTTCCGGGAGC
TGATCGACGACAACTACCGTGTCCATTGGATCTTGGATTCCTTGCCAGCG
GCCGTGCGCAACGACAAGTACAATTTCGTTTCTCGGGGGTTTCCGATCGG
TTTTATCACCCCTCCGAATTACAATAACCCCAATGTCCACTGCTTGTTCA
ACCATGTGCGTCTCGTGGTGCTTTATAATGAAAACCCGGCGCACTTCAAG
GGATCGCGCATTGTTGGGTTCGAAGTAATCCCTTTCTCAGTCAAGCACAA
ATGGGACAGTAAAAACAAGATGCGGATCAGCGTCCTCGTGTTCCTCTTCA
GTGCAGTCGGCACGGCCCAAGCTGGTTTCTACCTACCTGGTGTCGCACCT
AAGAGCTACGATGCCCGGGAAAAT back to top
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