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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g53.6437.mrna |
| Orig protein id | gnl|cribi|Naga_100007g53.6437 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:840512..842728 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1522 ID=rna1522|Name=rna1522|organism=Nannochloropsis gaditana|type=mRNA|length=1727bp
CGGGAACATGATGCTTGTATGTGAACGATTTCTCAACCGTTATCCACATG
CGTCGTATTTTATCTTCTTCTTTCAATTAAGGACCGTCCAGGACATCCTA
GGGACGGAGACGATCGCGTTAGGGAAGAGGGGGACAGCGGATATCAATTT
AGGCGTACCAAGCTATCATGGCTGCCACAGCGGACGATAAACGAATCAAG
TTGCTGCTGGAGCAGATCCGTCGCCTTCCACACAACAAAAGTTGTGTTAA
TTGCGGCAAAGTAAGCATCGCAGGTCATGGAGACATTTGCATTAAGTTCC
TGACATTTTTGTGCCATACTTGCAAGAGTGCGCATCAATCATTTTCCCAT
CGATGCAAAAATGTCACCCTGTCCAACTGGACCCTGGCTGAAGTGCAGCA
GCTCTCTGATCAGGCAGGTGGAGGAAATCAAAATGCACGCCAGACATGGC
TGGGCAAGCTCGATGGAACACTGCTGCTGCGACCCGGCGACTCCTTACAA
GATGTTAAAAATTTCGTGAACGACGCCTACAACCACAAACGATATTGGAA
AGATCCTCAAATGATCGCTAAGAGCACTTCGGTGGCTGCCGAAGGCACCC
AATCGGCTTCGGCAAGCACCGCATCCCTCCCTCGACAGAGCATAGGGGGG
ATCGGCTCACGGCTTGAGGGGCCCATGTCTGAGATCCCGGACGCATCTAC
TGTAAAAAATCTGCTTGATCTTGAGTCTGATTGCATACCCACGGGGCCTG
CGCGATCCTTCCCCACCCTGCTGGAGCCCGCAACAGTCACATCCTGCACG
CAGTTCTCAGAGAGGGTTGCACGCAACGGCTTGAGCGACCGTTGCCCTCT
GACTGGAAGCGTCGGTCAGACTGGTGCTCCAAAGTCCTCGTCCTCCTTAA
TGTGCACGTCAACAATTGCAGCGCCTCAACCTCAGGACATGCAGTTTGGG
GATTTCTTGGGCGCTTTTTCCCCCTCGAACCCTACCCCCGGCCGGACGCC
TGCCGCACTCGCTCAACCCGGAAGTCACAGCAATCAAGCCTTGAATCTCA
ATGACGACTTCGGCGAGTTTATGTCCTCTCCTCCATCCCAGGGGCTCTCC
ATGTCGACTCAGTCAATGCGTCCCGTGCCGCTCACGGCCCCTCAACCTCG
GCCTTCCATGGTGGCCCCCCGTGTGCAACCCGAAGATCCCTTTGCCATGC
TCGCTCCGGATCGACCCACCCTTGCATCCATCCCACTCTCGCATTTGCAT
GCACAAAAAATGCATCCCGTAGGGCTTGCGCCTGCGTGCGTGATAGGCAG
CGGAGTACTTGCACCGCAGGTTTTCAGTATCAACGCGCCGCATTCGAGCT
TTCAGCCTGGGCAAGTGCCCTTGCATATGGTTATGAATGCGACAGGCGCG
CACGGCTGGAAAGCAGGGCAACAATGTACATCCCAAGAACCTGATCCTTT
CGCGGATTTGGATTGGCGGAAGTAGGCTGCGACAAGAAGCTACTCTTGAA
ACATACATGTAGCGCGGTCGAGTGCAGATATTGGCATGTAGAGAAGCGAC
AGATGAATGGCATAAGAGGGGAGCGGGTGCGAGCGAAAAGAATTAACAAC
AGCTCGCCGCTTCCTTTCTCCTGTACATCGAAAATGATGACATCGTGCTA
GGGCCCTAGGCCAAGCCTGAAAACGTTCTCAATTTTGTCAGGTCTAGCAA
CATGCCAACCCTACTTCACCCTCAAGC back to topprotein sequence of rna1522 >rna1522-protein ID=rna1522-protein|Name=rna1522|organism=Nannochloropsis gaditana|type=polypeptide|length=582bp
MTKATILFLFSLLLSGNASVTAARSSGYGAMDAKDSIIQTVASEEDGIVC
DTTGAKRHKVLAQALGTLFDQYEIHEGNLSFHMGGNPAGKYGVVKFDEAL
IPKALKRAAKATAGFPVPIEVSFLMGPQDAVFWYGCTPPPTRYFSIRSYL
AYRFPGEGRNISGYMPGAELGDPVNNAVIRTTGGPTDPFGKTTLFVSTGD
KVAFHRVREAFAQAGLPGEAANLDVLPSELVRFRDTTLPWAVDRSDTIAW
QFRVNEFINPAEGSAYLDKVWPVFLLRAKPSEGGRGDGGVAPAMPLTAPP
LKTRGTGESEEWLRSALEKLVEAVKTRMEVDRGLVLTHSFPLAPCMPDAI
RCISDLDYCPVAMPIPQWNLTACNPTCDWFTRDSLYSTPPADSDFINFMI
PRDRVLIVVGVNHVLLGKAAFTNFLVTGIRNPERPGHTPNFSSSHLAGSG
QYYLPGVRPESDFLYAQELSRDCGFPPRPFCELVTEDNIAYDEYLFFAER
AYLEMQTTVGPSPDEVISPFILAFDPAADPLLTAVDVPEPRVKPEGGLGT
GRRHGAAATLRGQRLSSMMAENGDKEGGTVEQ back to topmRNA from alignment at CM002457.1:840512..842728- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1522 ID=rna1522|Name=rna1522|organism=Nannochloropsis gaditana|type=mRNA|length=2217bp|location=Sequence derived from alignment at CM002457.1:840512..842728- (Nannochloropsis gaditana)
CATGTGTGGCACGCTGATGTACAACGTAGCATAGCTGGGGAACTTGGGTC
GACTTTTTGGCCTAACTGCGTCACGTCACAGCTCAGTTTCGCACACATTA
CCACGCACAGTGCCCAAGAATGACCAAAGCGACGATCCTCTTTTTGTTTT
CACTCCTTTTGAGCGGCAATGCGAGCGTTACGGCGGCCAGATCTTCGGGC
TATGGTGCGATGGACGCTAAGGATTCCATAATTCAGACAGTGGCGTCAGA
GGAGGATGGAATCGTCTGCGATACCACGGGTGCGAAGCGTCATAAAGTCC
TTGCGCAAGCGCTAGGAACGTTATTCGATCAATATGAGATCCATGAGGGT
AATCTTTCTTTCCATATGGGAGGTAATCCTGCCGGTAAATACGGAGTTGT
CAAATTCGACGAGGCCCTGATCCCCAAAGCTCTCAAGCGGGCGGCCAAGG
CCACGGCCGGCTTTCCGGTTCCCATAGAGGTCTCCTTCCTCATGGGACCA
CAAGACGCTGTATTTTGGTATGGATGTACGCCACCACCCACGCGATATTT
CTCTATCCGCTCTTACCTGGCGTACCGGTTCCCAGGTGAGGGCCGCAACA
TCAGTGGGTACATGCCGGGCGCCGAGTTGGGGGATCCCGTGAACAATGCC
GTGATCCGAACGACCGGCGGGCCCACGGATCCTTTCGGGAAGACCACCCT
CTTCGTTTCTACTGGGGACAAGGTCGCGTTTCATCGTGTGCGCGAGGCCT
TCGCGCAGGCGGGGTTGCCCGGGGAGGCGGCGAACCTCGACGTGCTGCCC
TCGGAGCTCGTTCGCTTCCGGGACACGACCCTTCCATGGGCCGTCGACCG
CAGCGATACCATTGCTTGGCAGTTCCGCGTCAACGAGTTCATTAACCCGG
CGGAAGGCTCCGCATACCTGGACAAGGTCTGGCCGGTCTTCTTGCTGCGA
GCCAAACCGAGCGAGGGCGGGCGGGGAGACGGGGGCGTCGCGCCAGCCAT
GCCGCTCACGGCCCCGCCTCTGAAAACGCGAGGGACAGGGGAGAGCGAGG
AATGGCTCAGGTCGGCGTTGGAAAAGCTGGTGGAGGCCGTGAAGACACGC
ATGGAGGTGGACCGAGGTCTGGTTCTGACGCATTCCTTCCCCCTCGCCCC
CTGCATGCCGGACGCGATCCGCTGCATCTCGGACTTGGACTACTGCCCCG
TTGCCATGCCTATTCCTCAGTGGAATCTCACCGCCTGCAACCCCACGTGC
GACTGGTTCACTCGGGACTCTCTGTACTCCACGCCGCCCGCCGACTCGGA
CTTCATCAACTTCATGATTCCCAGGGACAGGGTCCTCATCGTCGTCGGAG
TCAATCACGTGCTGCTCGGCAAAGCGGCTTTTACCAACTTTCTGGTCACG
GGCATCAGGAATCCTGAGCGCCCGGGGCACACTCCGAATTTCAGCAGCAG
CCATCTGGCTGGCTCTGGTCAGTATTATTTGCCGGGAGTGCGGCCCGAGA
GCGACTTCTTGTACGCCCAGGAGCTGTCCCGGGACTGTGGCTTTCCGCCC
CGGCCGTTCTGTGAGCTAGTCACGGAGGACAACATCGCCTACGACGAATA
CCTCTTCTTTGCCGAGCGAGTAAGGACGCGTAGAAGTCGGTCACCGTTTC
GGGGAAAGGAGGGAAGATTAGGTACGTGATTGCCAGAATTCTCACGCTCT
GCCTGTTCCACGGAATGATTCACCTCACAGGCATACTTGGAGATGCAGAC
CACGGTGGGACCCAGCCCTGACGAGGTCATCTCCCCCTTCATCCTGGCCT
TCGACCCCGCTGCAGACCCTCTTCTCACTGCCGTCGACGTCCCTGAACCG
AGAGTAAAGCCCGAGGGGGGATTGGGGACGGGAAGAAGGCATGGAGCGGC
AGCTACATTGCGGGGACAGAGGTTGTCTTCCATGATGGCGGAGAACGGTG
ACAAGGAGGGAGGTACTGTCGAACAATAGACCAACGATGTGTAAAGCAGA
GGCATGAATGTAAACTAATAAAAGAATTTCGGGTATTGTGGGCGTCGGTG
GGGTCGATATTGCGAGATTTTGTTGTTGCCTCGCAAACCTGAAAGTAAAA
GACAAGGAGCTTGAGGGTGAAGTAGGGTTGGCATGTTGCTAGACCTGACA
AAATTGAGAACGTTTTCAGGCTTGGCCTAGGGCCCTAGCACGATGTCATC
ATTTTCGATGTACAGGA back to topCoding sequence (CDS) from alignment at CM002457.1:840512..842728- >rna1522 ID=rna1522|Name=rna1522|organism=Nannochloropsis gaditana|type=CDS|length=3498bp|location=Sequence derived from alignment at CM002457.1:840512..842728- (Nannochloropsis gaditana)
GCATACTTGGAGATGCAGACCACGGTGGGACCCAGCCCTGACGAGGTCAT
CTCCCCCTTCATCCTGGCCTTCGACCCCGCTGCAGACCCTCTTCTCACTG
CCGTCGACGTCCCTGAACCGAGAGTAAAGCCCGAGGGGGGATTGGGGACG
GGAAGAAGGCATGGAGCGGCAGCTACATTGCGGGGACAGAGGTTGTCTTC
CATGATGGCGGAGAACGGTGACAAGGAGGGAGGTACTGTCGAACAATAGA
TGACCAAAGCGACGATCCTCTTTTTGTTTTCACTCCTTTTGAGCGGCAAT
GCGAGCGTTACGGCGGCCAGATCTTCGGGCTATGGTGCGATGGACGCTAA
GGATTCCATAATTCAGACAGTGGCGTCAGAGGAGGATGGAATCGTCTGCG
ATACCACGGGTGCGAAGCGTCATAAAGTCCTTGCGCAAGCGCTAGGAACG
TTATTCGATCAATATGAGATCCATGAGGGTAATCTTTCTTTCCATATGGG
AGGTAATCCTGCCGGTAAATACGGAGTTGTCAAATTCGACGAGGCCCTGA
TCCCCAAAGCTCTCAAGCGGGCGGCCAAGGCCACGGCCGGCTTTCCGGTT
CCCATAGAGGTCTCCTTCCTCATGGGACCACAAGACGCTGTATTTTGGTA
TGGATGTACGCCACCACCCACGCGATATTTCTCTATCCGCTCTTACCTGG
CGTACCGGTTCCCAGGTGAGGGCCGCAACATCAGTGGGTACATGCCGGGC
GCCGAGTTGGGGGATCCCGTGAACAATGCCGTGATCCGAACGACCGGCGG
GCCCACGGATCCTTTCGGGAAGACCACCCTCTTCGTTTCTACTGGGGACA
AGGTCGCGTTTCATCGTGTGCGCGAGGCCTTCGCGCAGGCGGGGTTGCCC
GGGGAGGCGGCGAACCTCGACGTGCTGCCCTCGGAGCTCGTTCGCTTCCG
GGACACGACCCTTCCATGGGCCGTCGACCGCAGCGATACCATTGCTTGGC
AGTTCCGCGTCAACGAGTTCATTAACCCGGCGGAAGGCTCCGCATACCTG
GACAAGGTCTGGCCGGTCTTCTTGCTGCGAGCCAAACCGAGCGAGGGCGG
GCGGGGAGACGGGGGCGTCGCGCCAGCCATGCCGCTCACGGCCCCGCCTC
TGAAAACGCGAGGGACAGGGGAGAGCGAGGAATGGCTCAGGTCGGCGTTG
GAAAAGCTGGTGGAGGCCGTGAAGACACGCATGGAGGTGGACCGAGGTCT
GGTTCTGACGCATTCCTTCCCCCTCGCCCCCTGCATGCCGGACGCGATCC
GCTGCATCTCGGACTTGGACTACTGCCCCGTTGCCATGCCTATTCCTCAG
TGGAATCTCACCGCCTGCAACCCCACGTGCGACTGGTTCACTCGGGACTC
TCTGTACTCCACGCCGCCCGCCGACTCGGACTTCATCAACTTCATGATTC
CCAGGGACAGGGTCCTCATCGTCGTCGGAGTCAATCACGTGCTGCTCGGC
AAAGCGGCTTTTACCAACTTTCTGGTCACGGGCATCAGGAATCCTGAGCG
CCCGGGGCACACTCCGAATTTCAGCAGCAGCCATCTGGCTGGCTCTGGTC
AGTATTATTTGCCGGGAGTGCGGCCCGAGAGCGACTTCTTGTACGCCCAG
GAGCTGTCCCGGGACTGTGGCTTTCCGCCCCGGCCGTTCTGTGAGCTAGT
CACGGAGGACAACATCGCCTACGACGAATACCTCTTCTTTGCCGAGCGAG
CATACTTGGAGATGCAGACCACGGTGGGACCCAGCCCTGACGAGGTCATC
TCCCCCTTCATCCTGGCCTTCGACCCCGCTGCAGACCCTCTTCTCACTGC
CGTCGACGTCCCTGAACCGAGAGTAAAGCCCGAGGGGGGATTGGGGACGG
GAAGAAGGCATGGAGCGGCAGCTACATTGCGGGGACAGAGGTTGTCTTCC
ATGATGGCGGAGAACGGTGACAAGGAGGGAGGTACTGTCGAACAATAGAT
GACCAAAGCGACGATCCTCTTTTTGTTTTCACTCCTTTTGAGCGGCAATG
CGAGCGTTACGGCGGCCAGATCTTCGGGCTATGGTGCGATGGACGCTAAG
GATTCCATAATTCAGACAGTGGCGTCAGAGGAGGATGGAATCGTCTGCGA
TACCACGGGTGCGAAGCGTCATAAAGTCCTTGCGCAAGCGCTAGGAACGT
TATTCGATCAATATGAGATCCATGAGGGTAATCTTTCTTTCCATATGGGA
GGTAATCCTGCCGGTAAATACGGAGTTGTCAAATTCGACGAGGCCCTGAT
CCCCAAAGCTCTCAAGCGGGCGGCCAAGGCCACGGCCGGCTTTCCGGTTC
CCATAGAGGTCTCCTTCCTCATGGGACCACAAGACGCTGTATTTTGGTAT
GGATGTACGCCACCACCCACGCGATATTTCTCTATCCGCTCTTACCTGGC
GTACCGGTTCCCAGGTGAGGGCCGCAACATCAGTGGGTACATGCCGGGCG
CCGAGTTGGGGGATCCCGTGAACAATGCCGTGATCCGAACGACCGGCGGG
CCCACGGATCCTTTCGGGAAGACCACCCTCTTCGTTTCTACTGGGGACAA
GGTCGCGTTTCATCGTGTGCGCGAGGCCTTCGCGCAGGCGGGGTTGCCCG
GGGAGGCGGCGAACCTCGACGTGCTGCCCTCGGAGCTCGTTCGCTTCCGG
GACACGACCCTTCCATGGGCCGTCGACCGCAGCGATACCATTGCTTGGCA
GTTCCGCGTCAACGAGTTCATTAACCCGGCGGAAGGCTCCGCATACCTGG
ACAAGGTCTGGCCGGTCTTCTTGCTGCGAGCCAAACCGAGCGAGGGCGGG
CGGGGAGACGGGGGCGTCGCGCCAGCCATGCCGCTCACGGCCCCGCCTCT
GAAAACGCGAGGGACAGGGGAGAGCGAGGAATGGCTCAGGTCGGCGTTGG
AAAAGCTGGTGGAGGCCGTGAAGACACGCATGGAGGTGGACCGAGGTCTG
GTTCTGACGCATTCCTTCCCCCTCGCCCCCTGCATGCCGGACGCGATCCG
CTGCATCTCGGACTTGGACTACTGCCCCGTTGCCATGCCTATTCCTCAGT
GGAATCTCACCGCCTGCAACCCCACGTGCGACTGGTTCACTCGGGACTCT
CTGTACTCCACGCCGCCCGCCGACTCGGACTTCATCAACTTCATGATTCC
CAGGGACAGGGTCCTCATCGTCGTCGGAGTCAATCACGTGCTGCTCGGCA
AAGCGGCTTTTACCAACTTTCTGGTCACGGGCATCAGGAATCCTGAGCGC
CCGGGGCACACTCCGAATTTCAGCAGCAGCCATCTGGCTGGCTCTGGTCA
GTATTATTTGCCGGGAGTGCGGCCCGAGAGCGACTTCTTGTACGCCCAGG
AGCTGTCCCGGGACTGTGGCTTTCCGCCCCGGCCGTTCTGTGAGCTAGTC
ACGGAGGACAACATCGCCTACGACGAATACCTCTTCTTTGCCGAGCGA back to top
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