|
|
Properties
| Property Name | Value |
|---|
| Product | ectonucleoside triphosphate diphosphohydrolase 4 |
| Orig transcript id | gnl|cribi|Naga_100007g55.6547.mrna |
| Orig protein id | gnl|cribi|Naga_100007g55.6547 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:836126..838505 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1520 ID=rna1520|Name=rna1520|organism=Nannochloropsis gaditana|type=mRNA|length=4580bp
ATTTTTCTGGTCCTTTATCTTTAATCGCGAAACAGAAATCCTTGTTCTTC
CTCCTCTAACGAGAAATATTAATGCCTGTTCTCCCATCTCTCTCGAGAAA
TATCATTCCCGCTCGTACGAGAGACAGTACCCTTCGACACACCCCCTTGG
CGAGGCACGCCGTTTGTTCTTCGAGGTCATTTGACTTTTATCCCAGCTTC
ACTGCTGCTGCCACCTCCTGGCCCTGCCCACGATCAGCGCACAGGGAGTG
GAAACAGGTTTCCAGAAATAGCCCATCTGAAGGCCAAGCGGTCCCAAAAT
GCTGTGGGCAGCTATGTGCTGGGGCTGGGCCTTTGTCAAAGATTTGCCAT
ACACTTCTTGGCGTCTACTCTGCACATACCCTCGAACTATCAGCGTCATC
GCCGTGGGGTTTACTGTTATTGCTGTGGTGCTAGGACAGCGCCTGCTAGA
GAAGCTCGAGCAACCTCCTTCGAGGACCACGTCGCGATCATTGCCGAGCC
CCCTCATCCAGCGGCACTCCATGGGCGGCTCTGGGTCTGAGTACGACGAG
GTTGCGAATCGCGCGTATGGAGACGAGCTGCTACAAGACCGGAAGCTTCG
ACACCGTTACAGGAAGCTCAAACAAAATTGGCTGCACCACGGTCAGAATC
TCTTTCGCAAGATTCGGCGACGCGGTAGGGGGGCCACATCAAGAGATCGG
TGGAGTCGGAGGCTGGAGGACGGCTTGGAGTCGATCTATAGCCCCATGGA
GTTGCCAGTTCCTTCCAAGCTCTCGCGCGACGTGTCGTCGGGCATAGTGC
TGGACGGAGTCCGGCTGAATGGCGCCAGTCACCTCGCTTTCATGGCAATA
ATGGACTCGTGGAAGGTCTTTGGGGGCCGCGATGTGCCTCTACTCCTCAA
GATGTGCACCGGCGTGACGACCCTGTCCCTGCAGGCCGGCGACTGCCTGT
TTGAGGAGGGCAAGCCCTTGGAGCCTTGCCTCTACATCCTGGACGAGGGC
GAGTTGGAGATACTGGTGCGCTCAGATGTGACTGCCCAGGAAGCCTCCGC
ACGGGGCCACAAGAGAGAGGCGCCCCCGCCTCCGCCGACAGACTTCCTCG
AGCGCATCGACAAGCGGGGGACCATCATCTCGGGCATCTTGGACTTCGTC
GCTCTGCTGACGGAATCTGCCGTGGCGGAGAGTTGCGCGACGGCCCTCTG
TACCAAGGACTGCCGGGTGCTTCAGGTGCCTATCGTCCCTGTTGGCTCCG
AGGCGCGGCTCAGGAGCCCTAGTCTCTCGGGCATCGAGGAGGAGGACAGG
GATACGCCGCGGAACCCGGCCAGCGCGCATGCCCGCAGCAGGCTTATCCG
CAGCTGCCTTGTCCGCTCGTATCGGGTGACGTTTGCGACCGTGTACGCCT
ACCTGGGCGTCATCTACGACCTATACCCACGCTACCCCGTCTTCCCCGTC
GTGGGCTCGGCCCTGACCTCCCTCACCCCGGAGACCTCTCTGGGCGAGAA
GCATCAGCATGCTCTCAAGCGCCTCATCCGGCTCATACTAGCTTTGGACC
CTGATTACGAGATACCGGACTTGGACCGCTGTTCCGCCTTCTTTGCGTCC
TCTCCCACAGCAGGGGGCAACGGGACAGCACCGGGGGGTCCTGTCGGAGC
CACAGGCACCGACCCACGTCTCTACCGACGCGCCTCTGGGGCTGCCAGTC
CGAGGACACTCCGGGACAACGGGTCCCGAGGGCCTTCGTCCTCGCACCTG
CCCCGGTTGTACGTGCTTCGGGAGGGCGAGAGCCCCCACGAGCTGGACGA
CCAGTCCCGCACCAGCCTCCACATCCTCGTCACCGGCCGCCTCCAGGTCT
CCAAGCTGGACGCGCGGCTCTCGTCCGTCGATAGCAGCCAGGCACGAGGC
TTCGACCAGTCGACCTCCTTGGGTATCGGCAGGTCTATATTCAGCAGCCA
GTACGGGGCCGCTGCGATGGGCACTGCCCCGCCTCTCGTCAATCCCTTGG
GCTCTCCTGACGCGGGGGCGGCGGCAGCAGCCGCGGCAGCAGTGCGGGGC
GAGCATGGACCCGGCGCAGTTTTGGGCTACTCGTGCCTACTGACCGGTGC
CCCGGAAGACTGGTACTCGCCACGGGGTAAAAATCGCGCCCGTTTGCGCC
TAGAGGCATCTTGTGACTCCTTGGTGGTGCAGATCCCTTTGACCTTCGTG
GAACACGCCATGAAACCCAACATGCTGGCGACGCTGGCGTTGGCTGCTCG
AAAAACTCTCGAAACCATTCCGAGGGTGTTGCGGGTCATCGATTTTGGGG
TAAAATGGAAGCAACTGCAGGCGGGGGAGGTGTTGGTGAGGGAGGGCCAG
TCTAGCGATGGCTGCTTGTATGTGCTTCTCTACGGACGGGCACGGTCATC
CATACAGCAGAATGTGTCAGCTCCGTCATCACCCTCTCACAACAGATCGA
GTGAAGGCAGAGGGCTAGAGTCCCCTCACAAAGGAGGAGACCTAGACTTG
TCCGCCTCTCTACGGGAACACCGCGAGGAAAACGAGAACGTGGTGGTGGT
CGCAGACCACGGCCGTGGGACCTTAATTGGCGAGACAGAGATCTTGACGG
GCGGTGCACACAAAACGACGGTTCAAGCTGTGCGCTACACGAGTTTCGCC
ACCATTCCCTCCTCAGTGCTTAGCTTCTTGATTCGCCGGCATCCGCGCGT
GTTAGCCCACCTGGCCGAGCACGTGGTAGACAAAGCTGCTTTCAACAGCC
GGCACCATCTACCTCTTTATCGGGGGCGCACGCCAATGCGAATGTTTACG
TTGCCCACATCCAGTGCCGACGATGGTGAGAGGAGAAAGAGCGCGGGCTC
ACCTTTCTGGGCGTCTTCCCTCTCTTCTTCTACTACTGGGCGTCGCGTTG
TTGTGGGCGAGCCTGGGGCGAAGACAATCTTGGTGCTGCCTATCTCCACG
CACGTGCCCATCGAACGCTTCTCGAAAACGCTGGAGGCAGCATTGCTTCG
CGCTCGGCATTCAGTCCGAACCATTACGAGCGCATTGGCGGCGTCCGTTT
TGGGATTGGATGAAGACACGTATTACTCGGGGGCGTGGTGCCAGGACAAC
GTGCTGCTGCTGGAAAGTTGGCTGACGCAACAGGAAGAGCAGCACGAGAT
TGTCCTTTACCAGGCTGACTGGGAAGATTCCGAGTGGAATCGCATGGCAG
CCGGGATGGCAGACGTAGTGCTTTTGGTAGCCAATGCAGCAGACCAGCCG
GCGATCGTATACTTGGAGCAAAAGCTGGACCCCTTCATCCGCAACGCACA
GAAGCTGCTCATTCTCCTTCACATCAATCCTGGCCCATACCACACACCTA
CAGGCACGCGGCTTTGGATTGAGAGCCGCGTCGGCATCCAACAGCATTAC
CACGTACGGATGCACACGCAGTCTGTCCAATTCGACCAGCAGCATATCCG
CTCAGACTTCGCTCGGCTGGGCCGTATCTTGACGGGAACGGCCGTGGGAC
TTGTTCTGGGTGGGGGTGGCGCAAGAGGCATGGCACATTTGGGCTTGCTC
CGTGTGCTCGAAGAGGAAGGGATTCCGATTGACCACATAGTTGGGGTAAG
CATAGGCGCCTTCATAGGCGGACTCTACGCTAAACATAGTTCATATTTGG
AAATTCTCCCTTTTGCCAGCCGCTTTGCTCAAAACATGAGCAGCACCTGG
CTCTTCATCAAAGATTTTACCCTTCCCTTCACGTCATACTTTAATGGATA
TTCATTCGGGCGCGAGTTGGAGAAAGCGTTTGGAGACACTAAAATCGAAG
ACTGCTGGCTCTCCTTCGCTTGTCTGACAGTAGATCTTTCTGTCTCCCGC
GAGCGCGTTCATCAGAACGGCACTCTCTGGCGGTACGTGCGTGGGAGCAT
GACGTTGGCTGGGTTGCTTCCTCCGCTCTGTGACGTGGACCCCAAGGATG
ATGCGGTGCACTACCTGGTTGACGGCGGCTACGTGAACAATCTTCCTGCG
GACGTGATGAAAGAAGTTTTCTCTGCCGAGACCACCATTGCCTGCGACAT
CGGTGTGGACGTGACCATGACGGGGCGACAAGACTACGGCGACACTCTGA
CCGGCCTGCAGGTGCTGCTCCATGGCATGTCTCCCGCCTGGGCTCGGGGG
GGGATGGCGGGGACACTGAAGGCCCCGTCTATGGGCGAAATTTCGTCGCA
ACTCATGTACGTACACTCAGTGCAACAGCTGGAGAGGGCAAAGGAGACCA
TCGACTGCTACCTGAGACCTCCTGTGACTCATTTTGGCATCATGGACTGG
AAACGCCATGCGGAGCTTCAGTCTCTGGGTTACCTCTACTGCCGAGATAG
TATTAGGGCGTGGCGGGAGGCGCTTAAAAAGGAAAAAGATGGGAGAGGCG
CAAGCTCAGCGTTTCGGGTAGTTACGGGAGCCGCGGGAGATCACTTGATC
CGCGGACGCTCCCTTTCCGCTCTAGATGATTACAACTTGTCTTAGGACAA
CAATTTTGTCGAAGAGAAAGCATACATGAGAATAAAGTGCAACAAAAGGG
GAAAAGTCACAGCTCATCCCTCATTGGTCA back to topprotein sequence of rna1520 >rna1520-protein ID=rna1520-protein|Name=rna1520|organism=Nannochloropsis gaditana|type=polypeptide|length=646bp
MLIRAHTFTRHRPSGRLGRFNFSSSNDLVPNASVRIYISFVSSSASTPST
MHRLRSRERKHYFSASFAMLLLSTVASAQQAQPPSTPINPPDPPPPPPHT
SSPALNTEASRKTNMKITWPTQHGLIIDAGSTGSRMHVYQWDARRFDTVP
PPFSFPLTSNRWTNRLAPGISAFADCPQNVGTSLDSLISFAREVLAGKEH
QFKYFPIYLKATGGMRQLSPSKREAIIDEVRKYMMNKTTCPFYFEHDFAR
VVSGEEEGIYGWTAINFLLGKLLPASAGTGTVDANSSVGALDLGGASAQI
SFFVPDQDILANMFKLQIGAQKHWNVYVHSFLYFGINSARDRLHDTLTEE
AQANKDRTGKKKQVTDSMNAVVPSGSLRVTNPCLPKGYEESFRHQGKDYV
VEGATGSFSLCMDRVVPLLRKDLNSWCNFAHNHQCSFAGVYQPDLPPAPG
NFGEFYGFGTFKDIWKMLAMPDVKANMSVYKERTEAMCALDWDALQHMNK
QKKKKKREKSLPYLAHYCFVAAFGYALLTEGYGFEASRNLTVVSKIDGLK
VTWALGAMLYEINALPWEYAKPPTWITAFIGSFLLNILLFAGVIFFLRKS
HLSAAAIINRKRGISSTGLGSSDRSSDGIGGVSRSSYQSIPTSSQV back to topmRNA from alignment at CM002457.1:836126..838505- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1520 ID=rna1520|Name=rna1520|organism=Nannochloropsis gaditana|type=mRNA|length=2380bp|location=Sequence derived from alignment at CM002457.1:836126..838505- (Nannochloropsis gaditana)
ATGCTGATACGCGCACACACATTCACTCGCCACAGACCGTCCGGAAGATT
GGGCAGATTTAACTTTTCTTCTTCGAACGACTTGGTGCCCAACGCCTCCG
TCCGCATCTATATTTCCTTCGTTTCGTCTTCTGCCAGCACGCCATCAACC
ATGCATCGCCTGCGCTCGCGGGAACGAAAGCACTATTTCAGCGCGTCATT
TGCCATGCTGCTGCTGTCAACCGTCGCAAGCGCACAGCAGGCACAACCCC
CATCTACCCCTATCAACCCTCCAGATCCTCCTCCGCCTCCTCCTCACACG
AGTTCGCCCGCTCTCAATACGGAAGCAAGTCGGAAAACAAACATGAAAAT
CACTTGGCCTACACAACACGGCTTGATCATTGACGCCGGTAGCACGGGCA
GTCGCATGCACGTGTATCAATGGGACGCGCGTCGCTTTGACACGGTGCCT
CCCCCCTTCAGCTTCCCCCTCACCAGCAATCGATGGACAAACCGTCTGGC
GCCAGGCATATCGGCCTTCGCCGACTGCCCTCAAAATGTGGGCACCTCCT
TGGACTCGCTTATTTCTTTCGCGAGAGAGGTACTGGCGGGCAAAGAGCAC
CAGTTCAAGTACTTTCCCATCTACCTGAAGGCCACCGGTGGGATGCGTCA
GTTGTCGCCCTCCAAGCGCGAAGCCATCATAGATGAGGTCCGAAAATACA
TGATGAATAAGACCACTTGCCCGTTCTATTTTGAGCACGATTTTGCCCGC
GTCGTCTCAGGGGAAGAGGAAGGAATCTACGGGTGGACAGCCATCAATTT
CTTGCTCGGAAAGCTTTTGCCGGCGAGCGCGGGCACGGGGACGGTGGATG
CGAACTCCTCTGTGGGCGCGCTGGACCTGGGGGGCGCATCCGCTCAGATA
TCTTTCTTCGTCCCTGACCAGGACATCCTTGCCAACATGTTCAAGCTCCA
GATTGGGGCCCAGAAACACTGGAACGTGTACGTGCACTCTTTCCTCTACT
TCGGGATCAACTCCGCGCGCGACCGGCTGCACGATACGCTCACGGAGGAG
GCCCAGGCCAACAAAGACCGGACCGGGAAGAAGAAGCAGGTGACGGACAG
CATGAATGCCGTCGTGCCGTCTGGCTCCCTGCGCGTGACCAACCCCTGCC
TCCCCAAGGGTTACGAGGAGTCTTTCCGCCACCAGGGCAAGGACTACGTG
GTGGAGGGCGCCACGGGGTCCTTCAGCCTGTGCATGGACCGGGTGGTCCC
CCTCCTACGCAAGGACCTCAACTCCTGGTGCAACTTCGCACACAACCATC
AGTGCTCCTTTGCGGGGGTCTATCAGCCCGACCTGCCCCCTGCCCCCGGA
AATTTCGGGGAGTTCTACGGATTTGGGACTTTCAAGGACATATGGAAGAT
GTTGGCGATGCCGGACGTCAAAGCCAACATGAGCGTGTACAAGGAGCGGA
CCGAGGCCATGTGTGCCCTGGATTGGGATGCCTTACAGCACATGAACAAG
CAGAAAAAGAAGAAGAAGCGGGAGAAGAGTCTCCCTTATCTGGCGCACTA
CTGCTTTGTGGCCGCATTCGGATATGCGCTCCTCACAGAGGGGTACGGGT
TCGAAGCCTCACGCAATCTGACGGTAGTCAGCAAGATCGACGGACTCAAA
GTTACCTGGGCTCTGGGCGCCATGCTTTACGAGATAAATGCGCTGCCTTG
GGAATACGCCAAGCCCCCAACTTGGATTACAGCCTTCATCGGCTCTTTCC
TTCTCAACATATTGCTCTTTGCGGGTGTCATATTCTTCCTAAGAAAGAGC
CATTTGAGTGCTGCCGCTATCATCAATCGTAAGCGTGGGATCTCTTCCAC
AGGTTTAGGCAGTTCGGACAGGTCTTCTGATGGGATCGGGGGCGTTAGCA
GGTCCAGCTACCAAAGCATACCAACAAGCTCTCAAGTGTAGTGCATTTTA
CAAGGATTGCAATGTACTGGCTTGGGACTGAAATGAGTCTATGCATCAGA
CATTCGTACGAAATCGTTAAACCTGCCAAAAGAGACGGCATGGGAAAATA
TTGTAAGCATGCATTTCCACAGCAGACGGAGGTGCCCCACAGCCATCCGA
CTTTTCTACTTAGGTTGTTTTTTCTCTTGTTTTTCAAACATTAAGTCACT
GATTACATCATGTCTCCCCGACCGTGTTACAGCAGTACAATGAATAGACG
ACGTGACAAAGAATTGCGGCCATGCTATCATTCACCGCATGCGATAGTGT
AGTGATCTTCGTGTGTGCGAAACCAGCAGCGTACTCTTCAAGGGCGAAGC
AGACGACATTAAGAATCGGTGACTCCCTGAGTAAAAATCATCGGAAGAGT
CCGGAAGACAATTAAACAACGATCTAAGCA back to topCoding sequence (CDS) from alignment at CM002457.1:836126..838505- >rna1520 ID=rna1520|Name=rna1520|organism=Nannochloropsis gaditana|type=CDS|length=1941bp|location=Sequence derived from alignment at CM002457.1:836126..838505- (Nannochloropsis gaditana)
ATGCTGATACGCGCACACACATTCACTCGCCACAGACCGTCCGGAAGATT
GGGCAGATTTAACTTTTCTTCTTCGAACGACTTGGTGCCCAACGCCTCCG
TCCGCATCTATATTTCCTTCGTTTCGTCTTCTGCCAGCACGCCATCAACC
ATGCATCGCCTGCGCTCGCGGGAACGAAAGCACTATTTCAGCGCGTCATT
TGCCATGCTGCTGCTGTCAACCGTCGCAAGCGCACAGCAGGCACAACCCC
CATCTACCCCTATCAACCCTCCAGATCCTCCTCCGCCTCCTCCTCACACG
AGTTCGCCCGCTCTCAATACGGAAGCAAGTCGGAAAACAAACATGAAAAT
CACTTGGCCTACACAACACGGCTTGATCATTGACGCCGGTAGCACGGGCA
GTCGCATGCACGTGTATCAATGGGACGCGCGTCGCTTTGACACGGTGCCT
CCCCCCTTCAGCTTCCCCCTCACCAGCAATCGATGGACAAACCGTCTGGC
GCCAGGCATATCGGCCTTCGCCGACTGCCCTCAAAATGTGGGCACCTCCT
TGGACTCGCTTATTTCTTTCGCGAGAGAGGTACTGGCGGGCAAAGAGCAC
CAGTTCAAGTACTTTCCCATCTACCTGAAGGCCACCGGTGGGATGCGTCA
GTTGTCGCCCTCCAAGCGCGAAGCCATCATAGATGAGGTCCGAAAATACA
TGATGAATAAGACCACTTGCCCGTTCTATTTTGAGCACGATTTTGCCCGC
GTCGTCTCAGGGGAAGAGGAAGGAATCTACGGGTGGACAGCCATCAATTT
CTTGCTCGGAAAGCTTTTGCCGGCGAGCGCGGGCACGGGGACGGTGGATG
CGAACTCCTCTGTGGGCGCGCTGGACCTGGGGGGCGCATCCGCTCAGATA
TCTTTCTTCGTCCCTGACCAGGACATCCTTGCCAACATGTTCAAGCTCCA
GATTGGGGCCCAGAAACACTGGAACGTGTACGTGCACTCTTTCCTCTACT
TCGGGATCAACTCCGCGCGCGACCGGCTGCACGATACGCTCACGGAGGAG
GCCCAGGCCAACAAAGACCGGACCGGGAAGAAGAAGCAGGTGACGGACAG
CATGAATGCCGTCGTGCCGTCTGGCTCCCTGCGCGTGACCAACCCCTGCC
TCCCCAAGGGTTACGAGGAGTCTTTCCGCCACCAGGGCAAGGACTACGTG
GTGGAGGGCGCCACGGGGTCCTTCAGCCTGTGCATGGACCGGGTGGTCCC
CCTCCTACGCAAGGACCTCAACTCCTGGTGCAACTTCGCACACAACCATC
AGTGCTCCTTTGCGGGGGTCTATCAGCCCGACCTGCCCCCTGCCCCCGGA
AATTTCGGGGAGTTCTACGGATTTGGGACTTTCAAGGACATATGGAAGAT
GTTGGCGATGCCGGACGTCAAAGCCAACATGAGCGTGTACAAGGAGCGGA
CCGAGGCCATGTGTGCCCTGGATTGGGATGCCTTACAGCACATGAACAAG
CAGAAAAAGAAGAAGAAGCGGGAGAAGAGTCTCCCTTATCTGGCGCACTA
CTGCTTTGTGGCCGCATTCGGATATGCGCTCCTCACAGAGGGGTACGGGT
TCGAAGCCTCACGCAATCTGACGGTAGTCAGCAAGATCGACGGACTCAAA
GTTACCTGGGCTCTGGGCGCCATGCTTTACGAGATAAATGCGCTGCCTTG
GGAATACGCCAAGCCCCCAACTTGGATTACAGCCTTCATCGGCTCTTTCC
TTCTCAACATATTGCTCTTTGCGGGTGTCATATTCTTCCTAAGAAAGAGC
CATTTGAGTGCTGCCGCTATCATCAATCGTAAGCGTGGGATCTCTTCCAC
AGGTTTAGGCAGTTCGGACAGGTCTTCTGATGGGATCGGGGGCGTTAGCA
GGTCCAGCTACCAAAGCATACCAACAAGCTCTCAAGTGTAG back to top
|