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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g62.6503.mrna |
| Orig protein id | gnl|cribi|Naga_100007g62.6503 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:822362..824126 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1513 ID=rna1513|Name=rna1513|organism=Nannochloropsis gaditana|type=mRNA|length=2798bp
TGCAATTAATCGTAACGCGCTAACTCGAGGCCGTCTCCAATCTTCTTTCA
TCTTTCCCGTAGCAATTTTAAGGCCTTTTTCAGTCTCAGGGATTGCTTCA
AGAACGCGTTGGGAGGACGGCGACGGCAAGTCTTCTTGGTGTCAAGGCGC
AGACACAAATTTTGGAACAATGGGAAATTTGAGTTCAACGACGAACACAG
TGCGATCTACCTCACCAAGGAGGAACGCCCAAAAGGAAGTGGCAATAGCT
GGACATGGACGAGTTGAATCGAATATATTGCCAGCTCAAAGTGCATCTCC
ACCTCTTCCTGTGACAGCCGCGCCCGCGCAGGCATTGCACCTGGCGTCGC
CAGCTATCGGTGTGGACAGCACAAATTCAACTCCATGTTTTTCTGACCTA
GCGCCGACGATAGCTGTATCGGTGAGCACGAGTCCACCGTCCTCTACGGC
CGATTCTCTCATTTTCTCGGGACGCGCCGCAACATCTTCCCCATTGCCCT
TATCCCCGCGGTCAAATTTGTCTGATGGGAGCAGTGTAAGCTCAACAGAA
GGCCGAGACAACAGTTTTTTTTGGAATCTACAAGAGCAGTACAATAAGTA
CAAAATGGCACGGCGTCAAAGTCTGCTAGAAAGCGCGGGTCATCTGGGTC
GACCATGCCGACTTGTTTTGCACTCTATTACGGTACAAGGCGCTTTCGCG
TCAACCGCTCGAATACAAGCAGAAGTGTGTGTTTTGCGCGAGAAGCCGCA
CCAGGGCCTCGTCCCCGATGCTCCTCCCGTCCGCACCCCGCCTCGCTCCC
CCCTCAGGCCCGGGCAAGCCAACTTTGGTGGAGAATCCGATATCATCATC
CTCCCTTCAATCACGACCACTTCCACACTTAGCATCACAGTCCTCCTCCA
GGATGTGCCTATCGGAACTGTATACTACCCAGTGGCCGAAGTGACGGCAA
CCTTACGGCCCACAGAGCTTCGCCTTATGCCTGGGAGGACATCCCCGCGA
TCCCCCTCTAATTTTCCGCTTCGTCGCAGGAAGGGATCTCCGACGCTTCG
CCGCACGGGCGACACAGAGGCATCAGAGTGTCGAGGTAGGCTTTCTCCAC
CTCATTCCGTGAGCTTTCTGTCATCACCGCCTACCCCGCAAGCCATAGCA
GCACAAGGAAAGGATACGAACGGGGGGATACAAGCCGCAGAAGGGCCTCC
CAGGTTGTGCACCGTCTGGGGAGATCTCACATTTTACAATAACAGGAGTT
CAGCCGTGGGCTGGGTGGATGTCATAGAGGAAGCGGGCCAGCCGGTGAAT
GAGCCCAGGCTTCTTGTGGTCACTCCGCAGTCTTTTGGCTTGCTTGTAAC
CCCGCAGTGCGTTGTGGGAAATCTTGGGTTCAACATGAATCAGGTCAGGC
ACGTGGAGCCTGGAGGCCGTTCTCAACGACTGCCAGAACGAGAGGATGAG
ACAAGCCTCCAAAACATGAGCGTGAACGACAAAGGGGGAGGCTCATTGAC
TCTATCCGTCTCTCGTCCAGATGGTGGGGAGAAAGACATGATATTGGCTG
TTGATAGCGAGCAGGATGCACGCCGATGGACTCAGCTTCTCAGACGTGGA
TCTCACGATGCAGCTTTCGGGTCTGGGATTTAATTTCTGTAGTTTTGAGG
CGTCCCGTACTCCCCTTCCCCTCGTAGAATCAATTGTCCACTCACATTAT
GGCGCAGGGCGGCACGGAAGCCGTCAACTAGTAATGTGAATTCTTCTGCA
GTCAAGGCCTCCAGGTCTAACGAGCGTGCACTTGTTATAAGCGAAAAAGC
ACGTGGAATGGGTTGTTGACCGTGATGATTACCTGCCGTCGCGAGAAGTA
CAGGAAGAATCGCGGAGGAACAGCGACGACGTAAAGTTGCAGTGCCCAAC
AGACCGGGGTGCTCGGGATCAGGAGCCGTACTTTTCCGCACATCTCTCAA
GTCGGTAATAGCAAGGGAAGATAGGTTTCTGTGCTTGCCCTGGTTGCGAT
CTGACGCCCAGTAAAGGCGTGTACAGTCCTCATTGCAAAAAATGAGTCTT
TTTTTGGGTACCCCACGACGGCCGTGCTTTCCGAAATATGAATTGATTTG
ATCGAAATGATTAGAATCATACATTAAAAAATCAACAATTTGAGTAACGC
ATAATCTAGAGTCGGAGTCCGCCAAAAAGTGGTAGTGACCTGCCAGTCAA
AAATCAGTCCCTACGGAGCAAGTGACGGTAATCCTTCGCTTACCTTTATA
ACACATATTCCTTTCTTGAGGGTCAACATTAGACGATCAAGAGCTGCCTT
TTCTTGAGCGGGAAACGATGCAGGTAGAAAAACGTGATCGCTAGTTCCGA
GCAGAAAAATGCCAGCTGCCGGAGCCTGTATTCTCACATCTGTGCGCATT
CCTGCTTCGACAGAGCTTCCTCGCTCTCCCTTCTCGTCGTGCGAGAAAGA
AAGGGAGACAGTTTCTAGTTCACAGTTGGAGCTATCCACGGCCTGGAAAA
AATCAAGAATATCTCGCTTGCGGGGTTCGTTGACCACTTTATGTGCTAGT
TCGTTGATGTAGTAGGCAAGCCGGCTCTGGCGAGTCTCCAGAACACAAGC
CAGTCCAGCTGTCAAATATAGACGAAACATAAATAAAATATAAACATACA
GATGCTAATATTGTTACTATGCACGGCATAGAAGTAAATAGTTAAGTAAA
TCTCAAGCTTTACAACGATTGCAGAGAAAATGCTTGATAGGATTGTATCG
AACAATTTTACGCCTTCATATCGATATATAATAAGAAAATACACCACG back to topprotein sequence of rna1513 >rna1513-protein ID=rna1513-protein|Name=rna1513|organism=Nannochloropsis gaditana|type=polypeptide|length=417bp
MYDADVGENVKNCAEGGPSHVLKSVSSHVKEGQRKASTSPVRPDASRSEN
CVDGKSHANFDIGRSGTHVEKPNASIDSVPDKDQHSVGILFLAHDGVTNP
LLWEKWRASDKVFASRIRFFVFRNTKISHPSFFTTKYDLKLRLRTKWCSS
SIVHATIKSLQAVLEGDTSVGMIYIVSGYDIPIQPPSALFTTRSVITEGV
FKNVVPFRSVIAFTPGEDMDLKEASGWGKRNEKLRQSAVSHVQWCGLTRG
HARLIVAYPDLKQLFKLGNKISSACCPDEWVLGTALLLQLRCQATPTKAN
KCGTNGHDDGKEYWRGAEGVRHSPREADVPTTTASDTSIPNPSGCLESFD
VIDWPITDQYRSGRQAQSPLLWEDMEATSHKLLSLLAQHGCQGMPQKSKS
KGQLTLQWRPTRKSTPA back to topmRNA from alignment at CM002457.1:822362..824126+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1513 ID=rna1513|Name=rna1513|organism=Nannochloropsis gaditana|type=mRNA|length=1765bp|location=Sequence derived from alignment at CM002457.1:822362..824126+ (Nannochloropsis gaditana)
ATGTATGATGCTGATGTCGGCGAAAATGTTAAAAATTGCGCTGAAGGCGG
CCCGAGCCACGTCCTTAAATCGGTCTCTTCCCACGTCAAGGAAGGCCAAC
GAAAGGCATCAACATCCCCTGTTAGGCCAGATGCTTCAAGAAGTGAAAAT
TGCGTCGACGGAAAATCACACGCCAATTTTGATATCGGTAGAAGTGGGAC
ACATGTTGAAAAGCCGAATGCTAGTATAGATAGTGTTCCTGATAAGGACC
AGCACAGCGTGGGGATTCTTTTTTTAGCTCACGATGGAGTGACGAATCCC
CTATTATGGGAAAAATGGCGAGCAAGTGATAAAGTAAGTCATGTGTTTAA
GACACGGGTTTACCTTTTACGAATACAATGGTGTTTCGCTCGATGAGGCA
GGGCGACATGGGACCCGCAGTTCGGGTAGTCCCATACAGCGTGACGTGAA
CACTACCATCCTCTTTTCAACTCATTAGTATACACAATTGAGAAGTGCTA
CGGAAGAACTAGCTCTCAGTTCCGATGACTCTGCATAATCGACATTTTGA
CCTTTTCTGTGGCCGTTACACACAGGTATTTGCGTCTCGTATtcgcttct
tcgtcttccgcaACACAAAAATCAGCCATCCCAGCTTCTTTACAACTAAG
TATGACTTAAAACTTCGGCTTCGCACAAAATGGTGCTCGTCAAGTATCGT
GCATGCAACTATTAAATCTCTTCAGGCGGTGCTTGAAGGAGATACATCGG
TGGGCATGATATACATCGTATCCGGGTATGACATACCCATTCAGCCACCG
TCTGCCCTCTTTACAACTCGATCTGTGATAACGGAGGGAGTGTTCAAGAA
TGTAGTACCTTTTAGGAGCGTAATAGCCTTCACGCCCGGAGAAGACATGG
ACTTGAAAGGTATGGAGCCGGAAGGTAATGATTTCGCGATTTTCATGGTT
ACAGAGTCCGAGTCTTTTCTCCTCGATTTCATCGCTCACAAGCCATACAT
TTTGACATACAGAAGCGTCTGGGTGGGGCAAACGGAATGAGAAACTGCGG
CAAAGCGCTGTGAGTCATGTGCAATGGTGTGGATTGACCCGGGGCCACGC
CCGCTTGATTGTTGCGTACCCGGACCTCAAGCAGCTCTTCAAACTCGGCA
ACAAAATATCCAGCGCTTGCTGTCCGGATGAATGGGTCCTAGGGACGGCT
CTCTTGCTCCAGTTGCGGTGCCAGGCAACTCCTACAAAAGCAAACAAGTG
TGGAACAAACGGGCACGATGATGGAAAGGAATACTGGCGTGGAGCGGAAG
GCGTCAGGCATAGTCCGAGAGAGGCGGACGTACCCACCACTACGGCCTCA
GATACAAGTATTCCCAATCCATCCGGGTGTTTGGAGTCGTTCGATGTGAT
AGACTGGCCGATTACGGATCAATACCGGAGTGGGCGGCAGGCGCAGTCGC
CTCTTCTCTGGGAAGATATGGAGGCTACCTCGCACAAGGTCTTGTGGGCG
CCGCCTAGGACCTATCGGTCATTTACTCTGGCGACAGTGATTGAGCGCGT
TTCTCGTCAAGAAGGAAATCTCTTTTTCCGCAAAGTGGGTCCGttgaagg
aggcagagatcGGGGCTTTGTTCCGACTTATCACGGACGTTGAACGCGCC
ACAgctcctctcgctccttgcTCAGCACGGGTGTCAGGGTATGCCACAAA
AATCAAAGAGCAAAGGTCAACTGACATTGCAGTGGCGCCCAACTCGGAAA
TCCACTCCTGCGTGA back to topCoding sequence (CDS) from alignment at CM002457.1:822362..824126+ >rna1513 ID=rna1513|Name=rna1513|organism=Nannochloropsis gaditana|type=CDS|length=5016bp|location=Sequence derived from alignment at CM002457.1:822362..824126+ (Nannochloropsis gaditana)
ATGTATGATGCTGATGTCGGCGAAAATGTTAAAAATTGCGCTGAAGGCGG
CCCGAGCCACGTCCTTAAATCGGTCTCTTCCCACGTCAAGGAAGGCCAAC
GAAAGGCATCAACATCCCCTGTTAGGCCAGATGCTTCAAGAAGTGAAAAT
TGCGTCGACGGAAAATCACACGCCAATTTTGATATCGGTAGAAGTGGGAC
ACATGTTGAAAAGCCGAATGCTAGTATAGATAGTGTTCCTGATAAGGACC
AGCACAGCGTGGGGATTCTTTTTTTAGCTCACGATGGAGTGACGAATCCC
CTATTATGGGAAAAATGGCGAGCAAGTGATAAAGTATTTGCGTCTCGTAT
tcgcttcttcgtcttccgcaACACAAAAATCAGCCATCCCAGCTTCTTTA
CAACTAAGTATGACTTAAAACTTCGGCTTCGCACAAAATGGTGCTCGTCA
AGTATCGTGCATGCAACTATTAAATCTCTTCAGGCGGTGCTTGAAGGAGA
TACATCGGTGGGCATGATATACATCGTATCCGGGTATGACATACCCATTC
AGCCACCGTCTGCCCTCTTTACAACTCGATCTGTGATAACGGAGGGAGTG
TTCAAGAATGTAGTACCTTTTAGGAGCGTAATAGCCTTCACGCCCGGAGA
AGACATGGACTTGAAAGAAGCGTCTGGGTGGGGCAAACGGAATGAGAAAC
TGCGGCAAAGCGCTGTGAGTCATGTGCAATGGTGTGGATTGACCCGGGGC
CACGCCCGCTTGATTGTTGCGTACCCGGACCTCAAGCAGCTCTTCAAACT
CGGCAACAAAATATCCAGCGCTTGCTGTCCGGATGAATGGGTCCTAGGGA
CGGCTCTCTTGCTCCAGTTGCGGTGCCAGGCAACTCCTACAAAAGCAAAC
AAGTGTGGAACAAACGGGCACGATGATGGAAAGGAATACTGGCGTGGAGC
GGAAGGCGTCAGGCATAGTCCGAGAGAGGCGGACGTACCCACCACTACGG
CCTCAGATACAAGTATTCCCAATCCATCCGGGTGTTTGGAGTCGTTCGAT
GTGATAGACTGGCCGATTACGGATCAATACCGGAGTGGGCGGCAGGCGCA
GTCGCCTCTTCTCTGGGAAGATATGGAGGCTACCTCGCACAAGctcctct
cgctccttgcTCAGCACGGGTGTCAGGGTATGCCACAAAAATCAAAGAGC
AAAGGTCAACTGACATTGCAGTGGCGCCCAACTCGGAAATCCACTCCTGC
GTGAATGTATGATGCTGATGTCGGCGAAAATGTTAAAAATTGCGCTGAAG
GCGGCCCGAGCCACGTCCTTAAATCGGTCTCTTCCCACGTCAAGGAAGGC
CAACGAAAGGCATCAACATCCCCTGTTAGGCCAGATGCTTCAAGAAGTGA
AAATTGCGTCGACGGAAAATCACACGCCAATTTTGATATCGGTAGAAGTG
GGACACATGTTGAAAAGCCGAATGCTAGTATAGATAGTGTTCCTGATAAG
GACCAGCACAGCGTGGGGATTCTTTTTTTAGCTCACGATGGAGTGACGAA
TCCCCTATTATGGGAAAAATGGCGAGCAAGTGATAAAGTATTTGCGTCTC
GTATtcgcttcttcgtcttccgcaACACAAAAATCAGCCATCCCAGCTTC
TTTACAACTAAGTATGACTTAAAACTTCGGCTTCGCACAAAATGGTGCTC
GTCAAGTATCGTGCATGCAACTATTAAATCTCTTCAGGCGGTGCTTGAAG
GAGATACATCGGTGGGCATGATATACATCGTATCCGGGTATGACATACCC
ATTCAGCCACCGTCTGCCCTCTTTACAACTCGATCTGTGATAACGGAGGG
AGTGTTCAAGAATGTAGTACCTTTTAGGAGCGTAATAGCCTTCACGCCCG
GAGAAGACATGGACTTGAAAGAAGCGTCTGGGTGGGGCAAACGGAATGAG
AAACTGCGGCAAAGCGCTGTGAGTCATGTGCAATGGTGTGGATTGACCCG
GGGCCACGCCCGCTTGATTGTTGCGTACCCGGACCTCAAGCAGCTCTTCA
AACTCGGCAACAAAATATCCAGCGCTTGCTGTCCGGATGAATGGGTCCTA
GGGACGGCTCTCTTGCTCCAGTTGCGGTGCCAGGCAACTCCTACAAAAGC
AAACAAGTGTGGAACAAACGGGCACGATGATGGAAAGGAATACTGGCGTG
GAGCGGAAGGCGTCAGGCATAGTCCGAGAGAGGCGGACGTACCCACCACT
ACGGCCTCAGATACAAGTATTCCCAATCCATCCGGGTGTTTGGAGTCGTT
CGATGTGATAGACTGGCCGATTACGGATCAATACCGGAGTGGGCGGCAGG
CGCAGTCGCCTCTTCTCTGGGAAGATATGGAGGCTACCTCGCACAAGctc
ctctcgctccttgcTCAGCACGGGTGTCAGGGTATGCCACAAAAATCAAA
GAGCAAAGGTCAACTGACATTGCAGTGGCGCCCAACTCGGAAATCCACTC
CTGCGTGAATGTATGATGCTGATGTCGGCGAAAATGTTAAAAATTGCGCT
GAAGGCGGCCCGAGCCACGTCCTTAAATCGGTCTCTTCCCACGTCAAGGA
AGGCCAACGAAAGGCATCAACATCCCCTGTTAGGCCAGATGCTTCAAGAA
GTGAAAATTGCGTCGACGGAAAATCACACGCCAATTTTGATATCGGTAGA
AGTGGGACACATGTTGAAAAGCCGAATGCTAGTATAGATAGTGTTCCTGA
TAAGGACCAGCACAGCGTGGGGATTCTTTTTTTAGCTCACGATGGAGTGA
CGAATCCCCTATTATGGGAAAAATGGCGAGCAAGTGATAAAGTATTTGCG
TCTCGTATtcgcttcttcgtcttccgcaACACAAAAATCAGCCATCCCAG
CTTCTTTACAACTAAGTATGACTTAAAACTTCGGCTTCGCACAAAATGGT
GCTCGTCAAGTATCGTGCATGCAACTATTAAATCTCTTCAGGCGGTGCTT
GAAGGAGATACATCGGTGGGCATGATATACATCGTATCCGGGTATGACAT
ACCCATTCAGCCACCGTCTGCCCTCTTTACAACTCGATCTGTGATAACGG
AGGGAGTGTTCAAGAATGTAGTACCTTTTAGGAGCGTAATAGCCTTCACG
CCCGGAGAAGACATGGACTTGAAAGAAGCGTCTGGGTGGGGCAAACGGAA
TGAGAAACTGCGGCAAAGCGCTGTGAGTCATGTGCAATGGTGTGGATTGA
CCCGGGGCCACGCCCGCTTGATTGTTGCGTACCCGGACCTCAAGCAGCTC
TTCAAACTCGGCAACAAAATATCCAGCGCTTGCTGTCCGGATGAATGGGT
CCTAGGGACGGCTCTCTTGCTCCAGTTGCGGTGCCAGGCAACTCCTACAA
AAGCAAACAAGTGTGGAACAAACGGGCACGATGATGGAAAGGAATACTGG
CGTGGAGCGGAAGGCGTCAGGCATAGTCCGAGAGAGGCGGACGTACCCAC
CACTACGGCCTCAGATACAAGTATTCCCAATCCATCCGGGTGTTTGGAGT
CGTTCGATGTGATAGACTGGCCGATTACGGATCAATACCGGAGTGGGCGG
CAGGCGCAGTCGCCTCTTCTCTGGGAAGATATGGAGGCTACCTCGCACAA
GctcctctcgctccttgcTCAGCACGGGTGTCAGGGTATGCCACAAAAAT
CAAAGAGCAAAGGTCAACTGACATTGCAGTGGCGCCCAACTCGGAAATCC
ACTCCTGCGTGAATGTATGATGCTGATGTCGGCGAAAATGTTAAAAATTG
CGCTGAAGGCGGCCCGAGCCACGTCCTTAAATCGGTCTCTTCCCACGTCA
AGGAAGGCCAACGAAAGGCATCAACATCCCCTGTTAGGCCAGATGCTTCA
AGAAGTGAAAATTGCGTCGACGGAAAATCACACGCCAATTTTGATATCGG
TAGAAGTGGGACACATGTTGAAAAGCCGAATGCTAGTATAGATAGTGTTC
CTGATAAGGACCAGCACAGCGTGGGGATTCTTTTTTTAGCTCACGATGGA
GTGACGAATCCCCTATTATGGGAAAAATGGCGAGCAAGTGATAAAGTATT
TGCGTCTCGTATtcgcttcttcgtcttccgcaACACAAAAATCAGCCATC
CCAGCTTCTTTACAACTAAGTATGACTTAAAACTTCGGCTTCGCACAAAA
TGGTGCTCGTCAAGTATCGTGCATGCAACTATTAAATCTCTTCAGGCGGT
GCTTGAAGGAGATACATCGGTGGGCATGATATACATCGTATCCGGGTATG
ACATACCCATTCAGCCACCGTCTGCCCTCTTTACAACTCGATCTGTGATA
ACGGAGGGAGTGTTCAAGAATGTAGTACCTTTTAGGAGCGTAATAGCCTT
CACGCCCGGAGAAGACATGGACTTGAAAGAAGCGTCTGGGTGGGGCAAAC
GGAATGAGAAACTGCGGCAAAGCGCTGTGAGTCATGTGCAATGGTGTGGA
TTGACCCGGGGCCACGCCCGCTTGATTGTTGCGTACCCGGACCTCAAGCA
GCTCTTCAAACTCGGCAACAAAATATCCAGCGCTTGCTGTCCGGATGAAT
GGGTCCTAGGGACGGCTCTCTTGCTCCAGTTGCGGTGCCAGGCAACTCCT
ACAAAAGCAAACAAGTGTGGAACAAACGGGCACGATGATGGAAAGGAATA
CTGGCGTGGAGCGGAAGGCGTCAGGCATAGTCCGAGAGAGGCGGACGTAC
CCACCACTACGGCCTCAGATACAAGTATTCCCAATCCATCCGGGTGTTTG
GAGTCGTTCGATGTGATAGACTGGCCGATTACGGATCAATACCGGAGTGG
GCGGCAGGCGCAGTCGCCTCTTCTCTGGGAAGATATGGAGGCTACCTCGC
ACAAGctcctctcgctccttgcTCAGCACGGGTGTCAGGGTATGCCACAA
AAATCAAAGAGCAAAGGTCAACTGACATTGCAGTGGCGCCCAACTCGGAA
ATCCACTCCTGCGTGA back to top
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