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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g73.6541.mrna |
| Orig protein id | gnl|cribi|Naga_100007g73.6541 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:797932..798286 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1504 ID=rna1504|Name=rna1504|organism=Nannochloropsis gaditana|type=mRNA|length=5405bp
GTTGACAGGAACAACACCATGTCCATGGGAATAAACAATGGCATGCCAGG
TGCCCGCGTGGCTCCTGTGACTGCAATCGGCACCAGCGGAGTCACGGATG
AAAATGCACCTGAGTTGAGCAAGAGACTCTCGCTAGAAGATCAAGGCTTG
AGCACAATTCAGGCATTGAATGTGACGGCGGACACTCAAGACATTAGGCA
TGTGGTTGCAATGCTTCAGGAGACCGGTGACGGTCTTGACGGAGACACCA
CCGTCAACATCCCCACATCAAGGTGGCATGAGGAGGAAACAATCAGGATG
CCATCCGGACTCCTCCTGACAGGTGCTCAAACTTCTGCAGGGAAGGGAAG
TCCTGCCGCTCGTCCGGTTGAGGGGGACGAGAACGTCGATATCAACGAGG
CACTTAGTGATCACTGCAGTGCCTCAAAGCACAGGAGTATGATAGATCAG
AGTGTCAGAGGTCCTTTACGCACCCTGAATGTCGTCGCGCACTCAGGACT
TGCTGATCAGAGTAAGAAGTCCAGGGCACAAGAAGCTATCTTGGGCGGGA
AAGGAGACTTGATTATAAATAAACAGTCTGGGAGCGAAGTGCCATCGCCG
AGACGCGGCGCATCCAATACGGTATCGAAATTATCCTGCCAAGATGGGAG
TATTCAAACCTCCGGGGACAGGAGTCGGCCCTCAGCCGAGGAGCTCGCCA
GGAGACGTGAGACGGCAGATCCCGAGTCTCTTCGCTACCTGTTAACGCTG
TTGAGGTCGCCCGGTGGAAGCGTGCAAGGTTCGCAGAACTCTCTCTCTGT
TTCTCCTGGCAAAGCCATAGAGAAGATACTAGGCCCGACCCTGGCGGCGG
AGGATGAGAGAGGTCAAGACGGCGATGAGGGCGGAGGTGACTCGTCGACA
AGGGCGACTGGTGCTGAAGCGGGCGAGGAGGAAGCGACGGCTGCTCAGAG
GCAGAAGAGATGTGTAGAAACCAACATAACAGTGGACACTTTGCACTTGG
AGCGACTAATCGTGGACCTGGAAACATCTCTCGGGGGGGGAACGCCAGCG
GTGGCGGACAGCACGACGGATTCTTTCATATCACCCATCGCCCGGCGCCG
ATCCAGCATCATGGCACGCCGGCTAACGGCGGACCCGGGGCTTCTAGAAG
ATCTAATTCATGAACTCACTGGAGGAAAGGGTCGCCGCTTGAGTACGGTG
GCCAGGTCTCCGGCCTCTGTGGTGATGACGACTCTCAGCACCACGAGGAC
TTCGATGGCAGCCGCCGTCTGCGAGGTCCCCACGTTGGCTGCGACCGACA
GCCGGCGGGCGACGGCTTCGCCCGGCGATATTGGCATGCTGCTGGCCGAG
CTCCCTTCGGATCAAGGAGGGCAAGGCGGCGAAGGCAGACGGCCCTCTGG
ACGCACGTGGCTCGATACCGGTGAGCAAGCTGAAACGGGTGCTTCGTGCT
CAAGCTACTCCATGTCCCCTCCGCCTCTGCCCTCGCAGGGATCCAATCGC
AAATTGCTGCGGAGCTGCCTGAGCTCCAAGAAAGAACGACCCACACAGCC
CTCACCTGCCTCCCCGGGCCCCTCGTTCTCTGGCTCGGCCACCAAGAAGT
CCGTCGTCTTTGGGTCCCCCAATGCCGCCTACTTCCACAAGTCTTCTCCT
TCGAATTCTCTCACGCCCATGACCAAGCGGGATGTAGAGCGAATCTTTCC
CCAGCACGAGGAATCTTTAGGGCAGGCCGCGGTAGAGATGGAGACGGGGG
TGACGGCGGAGAACACGGCGATTTTAGCAGAGTGGAATGACAAGGATGCC
GGGGAAAATGGAGATGAGGACGAGTCTGAGGAAGCGGCGATTCGGGACCA
GGCGTCTGAGGATGCTGCTTTCGGCAAGCGGAAGCGCGTATCCAAGAGCC
CGCGGCCCAAGCGCCGACAGAGCTTGATGCTGGCTGCGGGGTCCCCTGGC
TTCATGCAGTATCGCCACGGCCCCGGGGCGACAACCAGGACAGACGATGA
AGAAGGGGATCCAGCAAATCGAGCAGTGGTTGCCGACGTGGAGGACATGG
ATTCCATCGGCGGTAATTCGTTGAATGAGAAGCTGGAGGAAGCCGAGGAG
GAGGATTTCGCGGCAGCGGCCGGCCAGGACCAGGCGGACGGCTCTGTTGC
GTCCGGCGAAGCCAGTCCCGCCCCCACTTCCACCTCACTCCGCCGTCGCC
GCTCCTCGGGGTTGTCCATCCTGAGCCAGGACGAGGAGATGCCCGACCTG
GAGAACAGGTCATCGTCGCCAGACAATTTTCGCACATTGGATCAGCGCAC
TTCCTCGCAACTGGGCATTATGGGCGCGACCGAGAGTTTGGACATGGGTG
ACGGGGCCAAAGGGAACGACAAAGAGGAATGTACTGTGGAGCTCGAGCAA
GACTTGCGAAGCTTGGTGAAGAATGTACGACCAGCATCCGTGCCAGCCGC
GGGAATCATGGCACCCGAAGATAACACAATGGAATTGGAAGGTAACCTGC
AGGCGCTCATGCAGCACGTGGGAGAGAAAGTCACAAGGGAAGGCCAAAGC
GCTTCCTCTGACCGGAACAAAAGGGTGGCGAATTTAGACATCGGGCTTGG
AGGCGTGGACTCAGATGTGGAGGAAGGCATGTCTCAGTCGCAAGACCTCA
CGAACACGACTACCTTCCACAACAAGGGGGAGGATATCCGCTTGTCTTTT
GACTCCGAGGACAACAGCTTCCATGGCGCCGACGCTACCAACACGAGCAT
TCTCGACAACCCCCCACACAGCCATGCTTTCTCGTTGAGTTTCACGGGCA
ACGCAGGTGGTGAAGACGAGGACGAGGACACGGACGACAAGGCGGTGGCC
GGGGGGGCGCGCTTGACGGACCTGAAGAGTACGACTTTCGACGTTGACCC
ACTGAGAGAAGAAGAAGCGGATGAGGATCAATCCAGTGGGCGACGAAGCG
GTTGTCCAGGGGACTTTGAACGACGCAGTGTCGTGCAGAAGTCCACGGAT
TCACACCCCGCCTCCCCCGAGAGCGCTGCTGGGAACATCAACGGTGGTGA
CGGAGACACGACTTCTTCGCCGTTTGCTCACATTGTCGTTGGCAATCGCT
TGCATGTCCCTGTCAGCGTTCAAGAGGATCAGAGCGTTAGTTGTCCATCG
TCGCATCCCCCTCCTTTGGACGCGGTGCAGTCACAGCCTCAAGAGGGAGC
GTTCACCCTACTATCCAAACCCTACCCCTACCCGTCTCCCGCCCGCGGTG
CTCAGGACGACAATCTAGCTCCACAGACAGAGGATGCGGCCGGGGAAGCT
GGATGCTGTGGCGCTCTAGACTGGAAGGGTGTTATGGCATTCCAGAACGA
TCGAAGTAACATAATGCGCTTGGTGAGGACCGCGACTGTAGAGGAGGCCA
ACCGTGGAAGCGAGTCATCTTCATCCGATGAATGTCATGTTGCGACGCTG
ACAGCGCACCTGCAACGAGTAGCCCGAGAAACCCTGCTGGAAAATTGTGA
AAGGGTGGCGATAAACCTTTACCGTTGCAAGCAAGACGAATCCGGAATTG
AAATGGCGCAGGAAGACCAAGAGCAAAAGAATCCTGGGGTCGAGTTTGAC
GTACCTGACACTGAGGCATTGCGCCAGGAGATGCTTGCGATCTCAACGGC
CTCCGGAAAGGACCAAGAGGAAGGACAAAGTATACAGGTGAATGCATTGA
TTCGGGCCGTGGCACCGCGCCTGCAGCTTGAATGGCGATCTGTTGAGAAC
CAGATTTTGCAGATGGTGCGCATGCGTGTGCGGCAGGAGATGGAAGATGT
GGATGAGAAAGGAAGCAGGTTAAAATTGGACCTGGATAACGTATCAAGTG
TCCAAACTGAAATTCAAGCGGCCATATCGACAGCGCGCGATAAGTTCGAA
CACATGCAAGCTCAGCGTAAAGATACAATCCGCCAACTCCGGCTGAAGGA
GCTTAAGACTGAGCATCAGGAAGCAGTCGAAGAAGCCGCGGCACTTGAAG
CCCGTGAGCGAGTTCTGAAGGAGGCCCTAGTGGCCGAGCAGGAGTCGTTG
CAATCCCGCAATGCCAAGCGCCAGATGGCAGCCAGACTTCGGGCAGCAGT
TGAAGAGAAACGGAAAGAAGCTGAAATCGTGCTTGGAGTGGAAGAGCAAG
GCAAAGTTTTGAGGGGATTGCATTTATGGCAGCCCTCGGTACTGACTAGC
GAGGAGTTACTGTTTTGGTGCGCTCACCCTGACAACTCGCGGACGCAAGT
TCGAATGCGTCTGGAAGCAAAAAAAAGGGACTCAATCCATAAAGTATTTG
TCACGGCCGTTCATGTCAATCATGCGGCTTCTGCGCCCAGTCGTGTGTCA
CGTAATACGCCCGAAGAGCTGGCATTTGGACCGAATAGCCGGGAATTGCT
GCTACATGTGCTGCGAAGCTTTCCTATCTTCGCATCCACAGAGCCTCCTG
AGCCCTTTGTGTCGGCCATAAATGAGCCCTTACCGGGTAAGCGCTCACGA
AGTTTTCTGTCGCAATCCCAGCGGACTTGGTCCTGGGAAGTTCTCTCGGT
GGACATGACAGAGGTACCGGCTGCGCTCGCCCGTTTGGAGCGTTTGGTAG
GCCGCGCGCATTTGCTCATGGAAGCAGTAGCGCGGGTAGAGGCGATCCAT
CCCTGCACCTTGGTTCTGGGGGAGTCCGCAATTCGATCGGAGAGCTGGGT
TGAGGAGTGCCTGTACGGGGCCTGCACAACCTGCCGTTTTGATCATGGAC
GAAGCGGGGCGAGTGGGGAACCGCACATCCGGCTACCGCATTGCTCCGGC
ATCCTGGTCGCAAACCTGGAGCCTTCTTCCAAGAGAGGGGGTTCTCCTCT
CGTGGCGAAATTTCTCCTGTCCCTATCCTTTTTAGCCAGTGTGCCGGTGC
GTGTGGAGCCGCCGTTGCCCTCAAGTAAGCGTGGGTGCTTGCAAAAATTG
GAGGGCTTACTGACCAACCGCCTTGGAGTACCGCCCCATCGTCCTATTAG
TATTCAAGGGCATCAAAAGTGGCGAGCAGCAACTATGATGGTCGAGGCAT
GTCGATTACTGGGAGGGGAAGGCGGACTGTAAGTTCGCTATCAGAATAGA
TGAGGAGATGCGCGTGTGTTTCCACGTGCCAAGTTTGATGGAGGAGGAAT
AAGGGTACTGAGTAAAGGTTATGCAATTAAAGAACATGGAGTGATAAACA
AAGGATAGCTCGATCGTGTGCGACAAAAAAGTGGGTGTCTTTTTTTCGTC
AAAACAAGAAAAGATGATCGGGAGAAGCTGTAAGTAAATGTGAAAGTAAG
CAGAGTTTGTTGAGAGAGATGGCATGAAATGGCTCATACGTAAATCGAAG
CAAACCTGTACCCGGCGCATAGATTAGCTCTGATAAAGCATGTGTACGTT
TTACT back to topprotein sequence of rna1504 >rna1504-protein ID=rna1504-protein|Name=rna1504|organism=Nannochloropsis gaditana|type=polypeptide|length=87bp
MVLHRIPVPWHKLCLKSVDTKLLDWDGPLRKFEKIDCEIPSVLFFHFHVE
NSYISADVRDWNAANRTRSKNVSSAYCLDVVRDYQII back to topmRNA from alignment at CM002457.1:797932..798286- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1504 ID=rna1504|Name=rna1504|organism=Nannochloropsis gaditana|type=mRNA|length=355bp|location=Sequence derived from alignment at CM002457.1:797932..798286- (Nannochloropsis gaditana)
ATGGTTTTACATAGAATACCCGTCCCTTGGCACAAGCTTTGTCTTAAATC
CGTAGACACGAAACTTCTTGACTGGGACGGGTGAAAGTGAAAGCAAATCC
TTTTAAAAAAAAACCGCATGGAACCTATTTCTTCATTCCTTGCGGCGGTC
GAAAGGAGAAATACGCCTCAGACCTCTGAGGAAGTTTGAGAAGATTGACT
GTGAGATCCCGTCGGTACTTTTTTTCCACTTTCATGTCGAAAACTCATAC
ATTTCTGCAGATGTCAGGGATTGGAACGCGGCCAACAGAACAAGGAGTAA
AAACGTCTCATCTGCTTACTGCTTAGATGTAGTGAGAGACTATCAAATCA
TATAA back to topCoding sequence (CDS) from alignment at CM002457.1:797932..798286- >rna1504 ID=rna1504|Name=rna1504|organism=Nannochloropsis gaditana|type=CDS|length=528bp|location=Sequence derived from alignment at CM002457.1:797932..798286- (Nannochloropsis gaditana)
ACCTCTGAGGAAGTTTGAGAAGATTGACTGTGAGATCCCGTCGGTACTTT
TTTTCCACTTTCATGTCGAAAACTCATACATTTCTGCAGATGTCAGGGAT
TGGAACGCGGCCAACAGAACAAGGAGTAAAAACGTCTCATCTGCTTACTG
CTTAGATGTAGTGAGAGACTATCAAATCATATAAATGGTTTTACATAGAA
TACCCGTCCCTTGGCACAAGCTTTGTCTTAAATCCGTAGACACGAAACTT
CTTGACTGGGACGGACCTCTGAGGAAGTTTGAGAAGATTGACTGTGAGAT
CCCGTCGGTACTTTTTTTCCACTTTCATGTCGAAAACTCATACATTTCTG
CAGATGTCAGGGATTGGAACGCGGCCAACAGAACAAGGAGTAAAAACGTC
TCATCTGCTTACTGCTTAGATGTAGTGAGAGACTATCAAATCATATAAAT
GGTTTTACATAGAATACCCGTCCCTTGGCACAAGCTTTGTCTTAAATCCG
TAGACACGAAACTTCTTGACTGGGACGG back to top
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