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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g75.6446.mrna |
| Orig protein id | gnl|cribi|Naga_100007g75.6446 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:790923..791617 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1502 ID=rna1502|Name=rna1502|organism=Nannochloropsis gaditana|type=mRNA|length=2095bp
TTTGCTGGCCTGCCCGAATGTGTTGTGTGCATAGGCAGGACAGCCTGGAA
GACTTGTTGTTCGCTTGGCAGCCGCGAGGGCTGTATCCGTGCGTGGTGGG
CATGCTGGGGCGGCATGCGGCAGCCTGCGCGCGTCTTGAAGCAAGCAACC
TCCCACCCAACCCCCTGAGTCTTGACACGATTTTTGTCCGGGCCTTTCCA
GAGGCGTTGGGAGCATTTGGTCCAGTTTTAGGTTCAGTAATACCGCACAC
ACTCATTACTGCTCCCGCAGGCTTCAAGCTTTGAGAGATCGCTCCCACCT
CGAACTGGAATTCGCCTTTCTGCGTCACGGTTCCCGTAGAAAATGCCTTC
TTCAAGGTTATGGCGTCTCCTTCTGCTACGGTGTTGCATTTTCCTGTCGG
CTGTGGCCGGAGCGGAGCATGAAACGGCCACAAACGCATCAAGCAAATCT
GGTTGCCCAACCTTTTCTCGACCAGCAGCGCCTTGTACTTCTGTGTGGAG
TATGCGGCCTTCGCAAGTTGACGTCGTTCTCGCGGTCGGGGACTCCATCA
CAGCTGCATTCGGAGCCCGTGGGAAACGGGGAGGCTTTCATGAGTCGCGA
GGGCTGAGTTGGAGTATTGGTGGCGATGAAGGTGCCTTGACATTGCCAAA
TTTCATCAAGGAGCACAATCCTAATGTTACGGGCTATTCTCTGGGCTCTC
GCGAGGCATCTTTATGCTGGGGCCCCGTGTGTAGGGATGTGCACCGTGCG
CGACATGATCGGCTGAATGGTGCACTCAGCGGCTCCATGGTCCGCAACGT
GTGGTTCGACCAACTGGACTACCTTGAAGCCGAGTTGCTTGCTCTTAACG
TGGACGTGGAAAAGACATGGAAGGTCTTGACTTTGTTCGTGGGAGCGAAT
GACTTGTGCCTGGTGTGTAAGATGCAAAAGCGCTTCGACCCGACAGAGTT
CGCGGAATACTACCGCCGTGTTTTGATCGAGATTCGGAGCAGATTTCCCC
GGACGCTTGTGAACGTGGTGGAGCTCTTTAACGTCTCCGCCATCTACCGT
GCTACGGAAGATCAGCCGTACTGCCGCGGCGTGCACCGCCTTGTCTTCCT
TGAGTGCGACTGCGCGTTCGGCCCCGAGTCCGAGGCCCGACCTTACAGGG
ACATGATGGATGAGATGGCCACGGCTTACAACCAGCAAGTACGTGCAGTG
ATTCGAGACTTGTCGCAGGTCCGCAACGAAACTTTCGCTATCGCCCTCCA
CCCATTCACTCGGGACTTGAACATCACATCCTTCCCCATGGAGATGATCT
CCACGCTCGACTGCTTCCATCCCTCGGCTAAGAGCCACGGGTTGACGGCA
ACAGCGCTCTGGAACAGCATGCTCACGCCACCTGAGAAACGGCTGAGAAA
CATCCCTTCGTTAACTTTGGAACCCTTGTGTGCCGGCGAGGACAGTGTAT
TTTACCCGGGGTCTCCGCCGGATGCGGAGGTCGTTTGGAAGGACGGAGGG
ACAGAGGGATACGTGGAGGGAGTCGTGCAGGCCATGAAAGAGAGCAAGAG
CTTGTTGCGAACAGGTTGAAGGGTAATAAGGTGGTTCGCTGCTCCGGCTG
GCTGACACGGCCCCGAGGGACGCTGGCAATCACGGCGAATGATAGAGGTT
GGAAGCAGAGGGGGTCGGACAGCCTGCGACTCTCCACGTTAAGATGTTAT
CTGTATCAAAGTGTAGAGACCCTTTTCCAACAAGTGAATAAAGTACATAT
TCTGGAGGTTCGTTGGTGGAACGTAGAAAGTGGGAGAGTCAGCGTGAAGA
GTGTTATGCGTATTGTCATCCTCTATGGAAAAGCCAGAGCCGATGACGGA
CATTAGTCTTACTACGATGAAGAAGGGATAAACATAGACCGGATTTCAAG
AGAGAGAGAAGGGAGGGTAGAGTCCCTTACTCAATGAGGCACGGTGCGCC
CAGCCTTTTCAGAGGAAAAGCGCGCCGAGTACTGTTGGATAAAGAAAGCT
GGGAATCAAGATGTTTCCATGTGCATACGAGTCGTGTAAAAGCAAATGAT
GAGCCGGCTGCAGGTCAATCGAAGAAGCAACAAACCGAGTGGACA back to topprotein sequence of rna1502 >rna1502-protein ID=rna1502-protein|Name=rna1502|organism=Nannochloropsis gaditana|type=polypeptide|length=187bp
MTADDIKGLSKEECLFLFRLLPPATLQQLHGEWQGEILAMGMSYPLAYLL
WHWRLGRGWWLGKGVDQATGCGYNVFYNHGITSRSRRFDAYTGLSAYEAR
TKDPRDTRHSRLYVCKNQANRYLAVERAAEDKDVNSMRKWSDTCDAGSVR
CRDPLRPRWLIPGLRLPGRFSGTHTNQFHPLFARGSK back to topmRNA from alignment at CM002457.1:790923..791617- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1502 ID=rna1502|Name=rna1502|organism=Nannochloropsis gaditana|type=mRNA|length=695bp|location=Sequence derived from alignment at CM002457.1:790923..791617- (Nannochloropsis gaditana)
ATGACGGCAGATGACATCAAAGGTCTAAGCAAGGAGGAGTGCTTGTTTCT
CTTCCGTCTCTTGCCCCCAGCCACCCTACAACAGCTTCACGGAGAATGGC
AGGGGGAGATTTTGGCCATGGGCATGTCCTATCCTCTTGCCTACTTGCTC
TGGCACTGGCGTTTGGGAAGGGGTTGGTGGTTGGGTAAAGGAGTCGATCA
AGCGACGGGTTGCGGGTACAACGTATTCTATAATCACGGAATAACTTCGA
GGAGTCGGCGGTTTGATGCGTATACCGGACTCAGCGCGTACGAAGCGAGA
ACAAAGGATCCAAGAGACACTCGACATAGTCGGTTGTATGTATGTAAGAA
TCAAGCCAATCGATATCTTGCTGTCGAACGTGCTGCTGAAGATAAGGATG
TGAATAGCATGCGGAAATGGAGTGACACATGTGATGCCGGGTCGGTCCGC
TGCCGAGGTGCTTCTCCTGCTCGCGATCCCTGTGGGGTTGCGACGGCGGA
GGGCGAAAGTCAGGGCCGCTGCGGGGAGTCCTTGCATCTGGTTTACGCGC
GGCACAATGACGGCCTGTTCCACCGCCTGCATGAGGAGATCCGCTTCGTC
CACGATGGCTTATTCCTGGGCTTCGGCTCCCTGGGAGGTTTAGCGGGACG
CACACCAATCAATTCCATCCCCTTTTTGCTCGTGGCTCCAAATAG back to topCoding sequence (CDS) from alignment at CM002457.1:790923..791617- >rna1502 ID=rna1502|Name=rna1502|organism=Nannochloropsis gaditana|type=CDS|length=1128bp|location=Sequence derived from alignment at CM002457.1:790923..791617- (Nannochloropsis gaditana)
ATCCGCTTCGTCCACGATGGCTTATTCCTGGGCTTCGGCTCCCTGGGAGG
TTTAGCGGGACGCACACCAATCAATTCCATCCCCTTTTTGCTCGTGGCTC
CAAATAGATGACGGCAGATGACATCAAAGGTCTAAGCAAGGAGGAGTGCT
TGTTTCTCTTCCGTCTCTTGCCCCCAGCCACCCTACAACAGCTTCACGGA
GAATGGCAGGGGGAGATTTTGGCCATGGGCATGTCCTATCCTCTTGCCTA
CTTGCTCTGGCACTGGCGTTTGGGAAGGGGTTGGTGGTTGGGTAAAGGAG
TCGATCAAGCGACGGGTTGCGGGTACAACGTATTCTATAATCACGGAATA
ACTTCGAGGAGTCGGCGGTTTGATGCGTATACCGGACTCAGCGCGTACGA
AGCGAGAACAAAGGATCCAAGAGACACTCGACATAGTCGGTTGTATGTAT
GTAAGAATCAAGCCAATCGATATCTTGCTGTCGAACGTGCTGCTGAAGAT
AAGGATGTGAATAGCATGCGGAAATGGAGTGACACATGTGATGCCGGGTC
GGTCCGCTGCCGAGATCCGCTTCGTCCACGATGGCTTATTCCTGGGCTTC
GGCTCCCTGGGAGGTTTAGCGGGACGCACACCAATCAATTCCATCCCCTT
TTTGCTCGTGGCTCCAAATAGATGACGGCAGATGACATCAAAGGTCTAAG
CAAGGAGGAGTGCTTGTTTCTCTTCCGTCTCTTGCCCCCAGCCACCCTAC
AACAGCTTCACGGAGAATGGCAGGGGGAGATTTTGGCCATGGGCATGTCC
TATCCTCTTGCCTACTTGCTCTGGCACTGGCGTTTGGGAAGGGGTTGGTG
GTTGGGTAAAGGAGTCGATCAAGCGACGGGTTGCGGGTACAACGTATTCT
ATAATCACGGAATAACTTCGAGGAGTCGGCGGTTTGATGCGTATACCGGA
CTCAGCGCGTACGAAGCGAGAACAAAGGATCCAAGAGACACTCGACATAG
TCGGTTGTATGTATGTAAGAATCAAGCCAATCGATATCTTGCTGTCGAAC
GTGCTGCTGAAGATAAGGATGTGAATAGCATGCGGAAATGGAGTGACACA
TGTGATGCCGGGTCGGTCCGCTGCCGAG back to top
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