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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g84.6450.mrna |
| Orig protein id | gnl|cribi|Naga_100007g84.6450 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:776948..779891 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1497 ID=rna1497|Name=rna1497|organism=Nannochloropsis gaditana|type=mRNA|length=780bp
ATGCCATCCAGCGACACAAGGAAGAGCCGCCTCCCGGTCGTTCTGAGGCG
ATCTCTCATTGAGGGCCAAATATGGAAATCCAACCCGGCACCTCACAAGA
GGAAGTGTACAATACAAGGAAATTTTTCAAGGGAAAAGACCTCCAAAGGC
CTTCCCCTCTCGATAAAATATTATAGCATCGAAGAAAGCTATCTAGTCCA
ACTCGTCTCCTCCGCGGTGCAGAGGGTCCGCAACCATCACCAAACCGCTT
CAGTCGACGTTTGGGAGCGAAGGACTCAATTCGCTACGAAGTCTGGAGGA
CATCGAGTCAAGCCTGGATCACCCGTGGGAGCCCGGGGAGCGCAAGAGCA
GGGCAAGTTGATCCTTGCAAGCCTTCGCAAAGAGCTGGAAGAGATTACGT
GGCAAATTGCCTCGCGGAGTCGGAGAGCGTTAGCTGCTTCATTGAAAGTC
ACCGGGACAACTGACCGACGAACAAGGACGACTATTTTCAAGCTGCTCAA
TGACAGGAGTCTCGCTGGGCGAGGTTCCGACCGTGTTGGCAGATGCCAAT
CGTTGTCCTTGGAGATGTCTTGCATATCCCACGACATCCTCGACACGTCA
GAATTTCCCTCCTGGAATAAGCGGACCTTGACCCCCTGCCAAAAACAAAA
TTGCCTGTTGGCCGAGGACGGCCTGCTTATTTCCGCGGTGATCCGTAGGC
AGACGACCTGCGGAGCCATGCGACGAGGAAGTGGCATGGACTCTAGGTTG
AGTGCAAGACACCTTTCAAATGCGCCGTAA back to topprotein sequence of rna1497 >rna1497-protein ID=rna1497-protein|Name=rna1497|organism=Nannochloropsis gaditana|type=polypeptide|length=252bp
MFAIHRPLVRVHRMPFSSKECVESSLSSLSVPSNFRSSAPAASADAKRKE
EEDRMNVIDELELHPTHNIARKKHCAWRKPYYFCSTLKGHKNDIYCMKCR
RWIAGGGISHVKQHESRHHAGCGENTIDSGADMQQLQVNQTVAYSAGEQA
RLTAKLVGFLIRDSRPAALTLDKDFRAFLLALNPKFIIPDTKKIRTVTNA
MYNAARDTVLDYIHPLKQKGPSALRGMVACVSLDMWTDATQMTYIGVLLH
TI back to topmRNA from alignment at CM002457.1:776948..779891+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1497 ID=rna1497|Name=rna1497|organism=Nannochloropsis gaditana|type=mRNA|length=2944bp|location=Sequence derived from alignment at CM002457.1:776948..779891+ (Nannochloropsis gaditana)
ACCAGACCACTTTTCTATTCTACGGCCATTCCACAGAGGTCCACGCCGTT
GTTAAGAGCAAAAGAGTGCATACACACCATGGAAGTGCTTTCAGAGCAAG
ATCAATGGAGAGATGGTATAGTTTAGGTGCTGCGTAGATACCAAAATGTT
GAGAGTGGAGTCCGCACTTCGTGTGGAACCCAGGATCGACGAGTCGCTGA
ATAAACGATAGCTTCTGCAACTCAAAGTCAATGCGACCCACCCCCATCCC
CGTGAAATGTTCGCCATCCACCGTCCACTTGTACGTGTTCACAGAATGCC
ATTCTCAAGTAAGGAATGCGTCGAGTCCAGCCTCTCTAGCCTGTCGGTGC
CCTCAAACTTTCGTTCATCGGCTCCGGCTGCGTCTGCAGATGCCAagcgc
aaggaggaggaggacaggatgaACGTTATCGACGAGTTGGAGCTCCACCC
CACGCATAACATAGCGCGCAAGAAACACTGTGCGTGGCGGAAGCCTTACT
ACTTCTGCAGCACGCTGAAGGGCCATAAAAACGACATTTACTGCATGAAG
TGCAGGAGATGGATTGCTGGCGGCGGGATTTCCCATGTCAAACAGCACGA
ATCCAGGCACCATGCCGGGTGCGGCGAGAACACGATCGACAGTGGTGCTG
ACATGCAGCAACTTCAGGTGAATCAAACTGTCGCGTACTCCGCAGGGGAA
CAGGCGCGATTAACTGCCAAGCTTGTTGGCTTCCTCATCCGCGACTCACG
TCCCGCCGCGCTGACGCTTGACAAGGACTTTCGCGCGTTTCTTCTTGCCC
TGAACCCTAAGTTCATCATACCAGACACCAAGAAGATCAGGACGGTCACA
AATGCCATGTATAACGCAGCGCGGGATACGGTCCTAGACTACATCCATCC
GCTCAAACAGAAGGGTCCGTCGGCCCTCCGCGGCATGGTAGCCTGCGTTT
CTCTGGATATGTGGACGGACGCGACGCAAATGACGTACATCGGCGTGCTT
CTCCACACCATTTAGTGTACGAATGGCGGTttcgagaagaaggagtttTG
TCTGGCGTGTAAGGAGGTTGAGGCCGACCACGTAACAGCCCAGATCGTAC
AGCAGTACCTGGAGGCGACGGTGAAGGAGTTCGGGATACCTGTCAAAGCA
ATCTTCCGAGTTGTCCACGATGGTGACGCCGAACTCATCCAAGCCGTCCG
CAAGGtcggcctctcctcctcgctgtgCTTCACCCATAGCCTTCAGCGCA
CCATAGCGGTGTCTTtaaagggagaggacgatatCCTCACCACTCTGAAG
CGCGCCAGGAATGCTGTCTCTGGCGCCCGCCACAGCAACGTCCTAGCGGC
CTATCAACGCGAAACACAGGTGTCGACACAGCAGCATGGGACGTCTCCGA
CGGCGCACGCGCTGGGCGACAATTGCCAGCCCGCAGCGTCTGAGGTCTCC
GAACCTGATGAAAGGCAGAAGTCGGgagactcctccctcctggggCAGGT
CGTGGCCTTATATAAGCCTTTCCGAGGGTTGATCACGGAGCTGCAGGCGG
ACGATGTTACGTCACCCCTCGGTGTGCCCGCATACCTGGAACTGGTCGAA
GGCCTAAGAACAACGCCGAATATTGCGGAGACGTCTGTCGCCGGAACAGA
CTATCCCGCCTCATCCACCAGGCACCTCATAAGCGTCTTGCACCCCTCTG
TACAAAGATTAGCCAGGCAAGCGCGCACGGACCTGACGCGCCCATTCAAG
CTCCGGCGCATGCTGCCGCTGGCGGTGGCGCCGTGTCTGGACCCGTGCAC
GAAGAACCTGAGGGCCATGGGTGCGCCCGACGACGTCTTGAAGAAAACGT
GGAGAGTCATACAAGAGCAGACGGACCGGACAATAACGGTGCTCAAGAAG
GCGAATGGGTATGTGGAGGGGCGCGGCGAGAAGCGGGGCTGTGAAGGGGA
TTTCAAGACGACTAGTAGCTTGAGGGCCCTCTTCTTCGCGCAGAGCAACC
ACTATAATGACTTGGCGGTAGTGCATGACATGGAGCCCGCGCTCGACTTC
GAGGGCGTGGAGATAGAGAacagggaggacgtggcgtCGGAGATCACCAA
TTATCTATCCAAGTCAGTGCAAACGATAGGCCTCGAGAAGATTGGTACAG
TATTGGTGGAATCTGCGCGAGGGCTGTCCCGTACTCACCATCGTGGCCAT
GCATTACCTCTGCATTCCCGCGTCGTCGTCAAGCGTGAGGCGGCTGGTCT
CACGGACGAGGCTCATCGAGTCGGGGCCGCAGAAACTGCCTGAAACGTTC
GAAAAGCTCACTTTTACACGCATCAACTGGGACGAAAGCCTATACAATGT
GTGGCTCGAAGatgagaggacgggggatgATGAGAGCAAGAGTGGGAACG
CgacagacgaggaggcagaaggagaggagaagttAGAGGCACCGTGGCCA
GGTTCTGAAGCGCAGGGTGCGAGTGAGTTGGATAGCGAGATTCGGGCGGA
ATATGACCTCGGATTGGTTGACTTGATGGGTTACAATATTGATGAGCCCG
ACGATGCCTTCTGGGACGAGCtcggggaggaaacggagccATGGCTGGAC
ACTGAATAGCTGGAGAGGATTGCTATGATTGTGTCGAGTGATTGTTGGTC
GAACTTTAGCCAGTTTAGGTTTAATAGGGAGTCAAGAAAAGGCATGTTCA
TATTGCTCTTTTTCCGAGATGAGAAAAGCAGATGTATATGGAAAAGTGTT
TGAGTAATGAATGAAGGAGACAGGAGGTTAATAGGGAACAAAATGTGATC
AAATCAAAGTATTGTGCCTTGCTCCCAATGGAGAGAAGACATATGCATAC
AACATGAAGTTCTAACAGAGATGAATGGGAAGTCAAGCCGTAAGGAAGAT
TCCCATCACAAATAACGAAAAACAAAGGCGCTCAGGCGCTCAGA back to topCoding sequence (CDS) from alignment at CM002457.1:776948..779891+ >rna1497 ID=rna1497|Name=rna1497|organism=Nannochloropsis gaditana|type=CDS|length=759bp|location=Sequence derived from alignment at CM002457.1:776948..779891+ (Nannochloropsis gaditana)
ATGTTCGCCATCCACCGTCCACTTGTACGTGTTCACAGAATGCCATTCTC
AAGTAAGGAATGCGTCGAGTCCAGCCTCTCTAGCCTGTCGGTGCCCTCAA
ACTTTCGTTCATCGGCTCCGGCTGCGTCTGCAGATGCCAagcgcaaggag
gaggaggacaggatgaACGTTATCGACGAGTTGGAGCTCCACCCCACGCA
TAACATAGCGCGCAAGAAACACTGTGCGTGGCGGAAGCCTTACTACTTCT
GCAGCACGCTGAAGGGCCATAAAAACGACATTTACTGCATGAAGTGCAGG
AGATGGATTGCTGGCGGCGGGATTTCCCATGTCAAACAGCACGAATCCAG
GCACCATGCCGGGTGCGGCGAGAACACGATCGACAGTGGTGCTGACATGC
AGCAACTTCAGGTGAATCAAACTGTCGCGTACTCCGCAGGGGAACAGGCG
CGATTAACTGCCAAGCTTGTTGGCTTCCTCATCCGCGACTCACGTCCCGC
CGCGCTGACGCTTGACAAGGACTTTCGCGCGTTTCTTCTTGCCCTGAACC
CTAAGTTCATCATACCAGACACCAAGAAGATCAGGACGGTCACAAATGCC
ATGTATAACGCAGCGCGGGATACGGTCCTAGACTACATCCATCCGCTCAA
ACAGAAGGGTCCGTCGGCCCTCCGCGGCATGGTAGCCTGCGTTTCTCTGG
ATATGTGGACGGACGCGACGCAAATGACGTACATCGGCGTGCTTCTCCAC
ACCATTTAG back to top
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