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Properties
| Property Name | Value |
|---|
| Product | solute carrier family 35 member c2 |
| Orig transcript id | gnl|cribi|Naga_100007g104.6509.mrna |
| Orig protein id | gnl|cribi|Naga_100007g104.6509 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:735188..737204 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1478 ID=rna1478|Name=rna1478|organism=Nannochloropsis gaditana|type=mRNA|length=2872bp
GTCGCAGGTGACACCCTTATTCTACATACGAAACGTTCGGAAAGCCTTAA
TTCAGAGAAGCCCCCAGATAGAGGAGCACAGTCATGATGCTGCGGCATCG
CAGCTCCATGGCCCCAGTCGCAGCGTCTTTATGGCCAATATTAGTCTTTT
GCAGTCTGATTCAACTGCAATCAAGCATGAGAGTTGTAGAGGCTTTTCTG
GCGCGGAATTTTTTTTCAGTATCAAATAAAGCAGTCGTTGGTATCACGAT
GCCTCGGTTGACAAGCACTCCATTGCATCAAAATAGGCTCTTATGCCGCA
TGGTGCTGGGGGAGACAACAGCTTCTGCAACTCACATGAATGTGGTACCT
CAAGTAGCAGACAATATATCACCAATTGTACAAGATCCACAACGGCAGAA
TGGACAACCCCAGCAGCATCACCACAAACACCAACACCAGCCGAAGCCGC
CAGAGCAGTCGCACAGGCAGCGGCGGAAAGCAAAAGAAGAGCGAAGGAAA
GTAGCCGGCCTCACGGCCGTGGGGACAAAGAAGGGCCATGAGCAGCCATA
TGGAACGTCGCGGATGCATTCGAGCACGAAGTATCACCAGCGTAAAGGCC
TTGTAGTCCGAGTCTACCAGGAAGCTCAGCGCGAGGCACGTAGTGGCCGA
TTGGAGAAAGCGGAGGAGCTTTTTAGACGTTGCTTGACGATGGACAGGAA
AGATGGACGCAGTTGGCTTCAATTGGCGCAGCTTGCTAGCCGTCGGGGAC
GACAAGAAGAGGCCAGGTCGTACTTTGCGCAGGGAGTTTCCGAATGCCCG
GAGAGTGTTCACCTGCTACAGTCATGGGCTATGTTAGAGCACAAAGCTGG
CGATCTCGAGAAAGCATGTGAGCTTTTCGAGAAAGGCATGGCACAAGATC
CTGGCAATCCATATATAGCACATGCTTGGGGCCAACTGGAGCGGAAACGG
GCCGATCACGACAAAGCGCGGACATTGTATATGGACTCACTACGGCTGTA
CGGCCCATGGGCCCAGGTTTACATGGCTCTGGCAGAACTGGAGGTCGAAA
CCGGTCATGTTGAGATGGCTCGTCAAATTTTTGAAGAAGCTTTGCGTCTG
TGCGCACAGAACACGCACAAGTTATTGGTGGCCTGGGCTAAGCTGGAGGA
GGAAAACTTTGGTGACTGGGAAAAAGCAACAGAATTACTGTTGCGTGCTA
TGGAAGACGGTGGCCCTGACTTTACTGATGCCACTGTTGCTTTGGCACAT
TTAGAGATGAAAAAAGGTAACAAAGAGCGAGCAGTTGATATCCTACAGCA
ATCCAAGCATCAAGGGGGGGCAGGAGGTTCTCTGTTCAACACTTGGGCAT
CTGTTGAAGCGAAAGCAGGAAACCTGGAAACCGCTATCAAATTGTTGTCC
GAGGCCTGTGTGCTTTTTCCCGACGATTTCTCATTGCTGCAGACTCTTGG
CACATTAGAAGTAAAGCAAGGCCATCATGAGAAAGCTCGCGAATGCTTCT
CGCAAAGCGCTGCCATTCGCCCACATGTGGTGACATATAATGCGTGGGCG
ATTATGGAGGAGCGCTTAGCACACGATATGCGCGGACCTATGCGGCAAGT
TCAAATAATGCGCGCGCGTAAGCTATTTATGCTAGGTATGGCTGCAGATC
CGTCGCATGGCCCCCTCTACAACGCTTACGGTCGAATGGAGGAGAAAATT
GGAAATCTGACAGGGGCTCAAGAAGTCTTCCGGATGGGGGTCGAGGCACA
TTGTCCTGATATGCCCTCGGTTTTAAATGGGTGGGCCATGCTCTCTCTAA
AGCAGCGGAATTACGCTCAGGCCAGGTCCTTGCTGCAAAGAGGACTTTCC
GAAAACAAGCTGGGGAAGAATGTGGGGTTCTTATACCATTCACTAGGCAT
GCTGGAGATGAAGCTTGGTAAGATAGAGGATGCATGGAGGGTATTCAAAG
AAGCCACGGACAAATACCCACGCAACTCCCAGCTCTTGGTGGGAGCAGGT
CTAGCAGCAGAGAAGAGAGGCGAGGTGGACTCAGCCCGGGGTTTCTTCAA
GGGAGGCGTCGAATGTGATCGTCTCCATCACCAAGCCTGGCAGGCTTGGG
CGGTTATGGAGCATAGACAAGGGAATGTCAACACTGCCCGCGACCTTTTC
CGGCTGGGTTTGAAAGCGAATCCGGATTATGGAGCGCTATGGCAGGCTTA
CGGTGTGCTCGAATTTCATGAAGAAAACTGGGACGTGGCGCGGAGTTTGT
TCGCGGAGGGCATCCGCCGTGATCCTGGTCATGTCATGCTTTTCCAGGCC
TGGGCCGTTCTGGAGGTGAAGCTTGCTGATTACGAGAAGGGAAAAGAAAT
GATCAAGGAGGGCCTGCGAGTAGATTCGAGGCATGGTGCTTGTTGGAGCA
TTTACGGCTATATAGAGGAGAAATGTGGAAATGTAGACGAAGCCCGACGT
GTGTTTGAGATGGGTTTGAAACAGGCCCCTGACCATGCTCCACTTTTTCG
GGTATACGGAGACTTTGAGCGTCGGCAAGGCAACACCGACAAAGCTAGGT
CCCTTTATCAGCGAGCCATTTCGCTCGATCCCCATCATCCTCAAGCCTAT
GTGGTCTTAGGCCTTATGGAGCTCTATTCCGGTAATGCTGAAGGCGCTAG
AATGGTTCGCGAGGCGAGTCAGGCAGTTTTTGGCCATGACTTCGAATTTA
CAAAGCAACGGGAAGCTGTCTCTTCATTTGATAACGCGGAGTTAGGGGAG
TTGCATTCAATATGAGCGAAGTACATATATGCAAATTAATAATGAAAGAC
AGTGTCACTATAGAGCTTACTTTGAAAATGGTCAACATACCCAAAAAATC
ATTTCCTTCAAAAATAGCTGTC back to topprotein sequence of rna1478 >rna1478-protein ID=rna1478-protein|Name=rna1478|organism=Nannochloropsis gaditana|type=polypeptide|length=494bp
MPALPLELLIPAGLSFVLLLAAEALQRLVRIESHPWHPFLNYARICKYVL
SWYMISIGFTLCNKWIFRYWRGSGFPYPLLVTSVHMITKVFLTRLVDRCR
RAEHRVRPLPWSLYWKGPVSIGICTGLDISFSNLSFLFISVTFYTILKSG
AILWILVWAVIMRLEPLTWEIVSICAAVSFGVGLASYGETAFNSAGFVLV
TLACASSGLRWALTQLMLEGELNGRDDSMYRSALIGQLSSGRSDVDGTGG
NADSDCNIQGRSDPRDCGRHRCNTARDPPLVDHAHTPVNGSEAHSVSVQH
PQAFEILYHLTPASAIICVAAFLVVEWKSCVQSHVFKDLALLFQLLAILL
VGGLISFLLVLTEVKLVKISSSLTMSMFGALKEVITVAISMVVFHDDVSL
LNVFGLFVAILGAICYKRYKEKVSSAGSSNVAFGRNHGGREQLQRCSACL
PTTSRASSIEDDSSEDGEEILQAVGGRGMDREMEMFNFNHAELA back to topmRNA from alignment at CM002457.1:735188..737204- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1478 ID=rna1478|Name=rna1478|organism=Nannochloropsis gaditana|type=mRNA|length=2017bp|location=Sequence derived from alignment at CM002457.1:735188..737204- (Nannochloropsis gaditana)
AGACACTTTATTCACGCTGTCCACTGCGTTTCGTCTCCTTCGATACTCTC
TTGTACAGGTAGGAAATTGGAATCTTCATGATATAGCAAGCTTTCGCGCG
GTAGGATTCGCACTTAGGCTGTTTCCTTTGTTCACACGCGGTAGAAGACC
AGTACGACCGGAAACTCACGGAGTAGCGATTTGTGGCGGCCTTCTGCTTT
CCCTATGCTGGCATTGTACGCAAGCATCTATGCCGGCACTTCCACTTGAG
CTCCTTATTCCTGCTGGTCTTTCCTTTGTGCTACTATTGGCCGCAGAGGC
TTTGCAGAGGCTTGTTCGCATTGAGTCGCACCCCTGGCACCCCTTTCTCA
ATTATGCTCGAATTTGCAAGTATGTCTTGTCGTGGTACATGATAAGTATT
GGCTTTACTTTGTGTAATAAATGGATATTCCGCTACTGGCGTGGGAGCGG
ATTTCCTTATCCCCTTCTCGTTACAAGCGTGCATATGATAACGAAAGTTT
TTCTAACTCGACTTGTCGATCGATGCCGCCGCGCGGAGCACCGTGTTCGA
CCACTACCCTGGAGTTTGTACTGGAAGGGCCCTGTGTCGATTGGAATATG
TACAGGGTTGGATATATCATTCAGCAACCTGAGTTTTTTGTTCATTAGTG
TGACATTTTACACCATTTTGAAGTCAGGAGCCATCCTGTGGATTCTGGTT
TGGGCTGTGATTATGCGTTTGGAACCTTTGACTTGGGAGATAGTATCTAT
ATGTGCCGCGGTAAGCTTTGGAGTGGGCCTCGCTTCTTATGGAGAGACCG
CTTTCAATTCGGCTGGCTTCGTGCTAGTGACCCTGGCCTGTGCGTCCTCC
GGGCTGCGCTGGGCTTTAACCCAACTTATGCTGGAAGGCGAATTAAATGG
CAGAGATGACTCGATGTATCGATCCGCTTTGATCGGCCAATTGAGTAGTG
GAAGAAGTGATGTTGATGGAACAGGGGGAAACGCTGACAGCGATTGCAAC
ATTCAAGGGCGTTCTGATCCTCGCGACTGCGGGCGCCATCGATGTAACAC
TGCCAGGGATCCCCCTCTGGTAGATCACGCGCACACTCCCGTCAATGGTT
CAGAGGCGCACTCTGTCTCGGTTCAACATCCACAGGCTTTTGAGATTTTA
TACCACTTAACGCCTGCAAGTGCGATTATTTGTGTCGCAGCTTTTCTAGT
TGTAGAATGGAAGTCTTGCGTCCAATCTCACGTTTTCAAGGACTTAGCCT
TACTTTTTCAGCTTCTGGCCATCCTACTAGTGGGAGGTCTCATATCTTTT
CTGCTGGTACTTACGGAGGTGAAGCTTGTGAAAATCAGCTCCAGTTTGAC
CATGAGTATGTTTGGTGCATTGAAAGAGGTGCGTCACTTTCCATTTGTCC
TCTCAGAAGTACGCAGGACTCCAAAGGACCGCAAGTTGTTTTACCTTCCA
AAAATTTGTCTTCGATATATCTACGTACGCTTACGACAGGTAATCACAGT
AGCTATCTCGATGGTTGTCTTCCACGACGACGTCTCACTTCTGAATGTCT
TTGGACTGTTTGTTGCCATCCTCGGAGCCATCTGTTATAAGCGCTACAAA
GAAAAAGTCAGCTCGGCAGGTTCTTCTAACGTGGCATTCGGGCGCAACCA
TGGTGGGAGAGAACAGCTTCAAAGATGCTCAGCATGTTTACCTACCACAT
CTAGAGCTTCCAGTATCGAAGACGACTCGTCAGAGGACGGCGAGGAAATA
TTGCAAGCTGTAGGAGGGCGAGGGATGGATAGAGAAATGGAAATGTTCAA
TTTTAACCACGCTGAATTGGCTTAAATTGTGCACATGAAAATTCACATGT
ACAATCTCGAAAGAAATTTTTAAATGGCGAAAAAGTATGACGGAAAGTAA
GCCAATACTTGGTGAATGTCGCGACAGCTATTTTTGAAGGAAATGATTTT
TTGGGTATGTTGACCATTTTCAAAGTAAGCTCTATAGTGACACTGTCTTT
CATTATTAATTTGCATA back to topCoding sequence (CDS) from alignment at CM002457.1:735188..737204- >rna1478 ID=rna1478|Name=rna1478|organism=Nannochloropsis gaditana|type=CDS|length=2970bp|location=Sequence derived from alignment at CM002457.1:735188..737204- (Nannochloropsis gaditana)
GTAATCACAGTAGCTATCTCGATGGTTGTCTTCCACGACGACGTCTCACT
TCTGAATGTCTTTGGACTGTTTGTTGCCATCCTCGGAGCCATCTGTTATA
AGCGCTACAAAGAAAAAGTCAGCTCGGCAGGTTCTTCTAACGTGGCATTC
GGGCGCAACCATGGTGGGAGAGAACAGCTTCAAAGATGCTCAGCATGTTT
ACCTACCACATCTAGAGCTTCCAGTATCGAAGACGACTCGTCAGAGGACG
GCGAGGAAATATTGCAAGCTGTAGGAGGGCGAGGGATGGATAGAGAAATG
GAAATGTTCAATTTTAACCACGCTGAATTGGCTTAAATGCCGGCACTTCC
ACTTGAGCTCCTTATTCCTGCTGGTCTTTCCTTTGTGCTACTATTGGCCG
CAGAGGCTTTGCAGAGGCTTGTTCGCATTGAGTCGCACCCCTGGCACCCC
TTTCTCAATTATGCTCGAATTTGCAAGTATGTCTTGTCGTGGTACATGAT
AAGTATTGGCTTTACTTTGTGTAATAAATGGATATTCCGCTACTGGCGTG
GGAGCGGATTTCCTTATCCCCTTCTCGTTACAAGCGTGCATATGATAACG
AAAGTTTTTCTAACTCGACTTGTCGATCGATGCCGCCGCGCGGAGCACCG
TGTTCGACCACTACCCTGGAGTTTGTACTGGAAGGGCCCTGTGTCGATTG
GAATATGTACAGGGTTGGATATATCATTCAGCAACCTGAGTTTTTTGTTC
ATTAGTGTGACATTTTACACCATTTTGAAGTCAGGAGCCATCCTGTGGAT
TCTGGTTTGGGCTGTGATTATGCGTTTGGAACCTTTGACTTGGGAGATAG
TATCTATATGTGCCGCGGTAAGCTTTGGAGTGGGCCTCGCTTCTTATGGA
GAGACCGCTTTCAATTCGGCTGGCTTCGTGCTAGTGACCCTGGCCTGTGC
GTCCTCCGGGCTGCGCTGGGCTTTAACCCAACTTATGCTGGAAGGCGAAT
TAAATGGCAGAGATGACTCGATGTATCGATCCGCTTTGATCGGCCAATTG
AGTAGTGGAAGAAGTGATGTTGATGGAACAGGGGGAAACGCTGACAGCGA
TTGCAACATTCAAGGGCGTTCTGATCCTCGCGACTGCGGGCGCCATCGAT
GTAACACTGCCAGGGATCCCCCTCTGGTAGATCACGCGCACACTCCCGTC
AATGGTTCAGAGGCGCACTCTGTCTCGGTTCAACATCCACAGGCTTTTGA
GATTTTATACCACTTAACGCCTGCAAGTGCGATTATTTGTGTCGCAGCTT
TTCTAGTTGTAGAATGGAAGTCTTGCGTCCAATCTCACGTTTTCAAGGAC
TTAGCCTTACTTTTTCAGCTTCTGGCCATCCTACTAGTGGGAGGTCTCAT
ATCTTTTCTGCTGGTACTTACGGAGGTGAAGCTTGTGAAAATCAGCTCCA
GTTTGACCATGAGTATGTTTGGTGCATTGAAAGAGGTAATCACAGTAGCT
ATCTCGATGGTTGTCTTCCACGACGACGTCTCACTTCTGAATGTCTTTGG
ACTGTTTGTTGCCATCCTCGGAGCCATCTGTTATAAGCGCTACAAAGAAA
AAGTCAGCTCGGCAGGTTCTTCTAACGTGGCATTCGGGCGCAACCATGGT
GGGAGAGAACAGCTTCAAAGATGCTCAGCATGTTTACCTACCACATCTAG
AGCTTCCAGTATCGAAGACGACTCGTCAGAGGACGGCGAGGAAATATTGC
AAGCTGTAGGAGGGCGAGGGATGGATAGAGAAATGGAAATGTTCAATTTT
AACCACGCTGAATTGGCTTAAATGCCGGCACTTCCACTTGAGCTCCTTAT
TCCTGCTGGTCTTTCCTTTGTGCTACTATTGGCCGCAGAGGCTTTGCAGA
GGCTTGTTCGCATTGAGTCGCACCCCTGGCACCCCTTTCTCAATTATGCT
CGAATTTGCAAGTATGTCTTGTCGTGGTACATGATAAGTATTGGCTTTAC
TTTGTGTAATAAATGGATATTCCGCTACTGGCGTGGGAGCGGATTTCCTT
ATCCCCTTCTCGTTACAAGCGTGCATATGATAACGAAAGTTTTTCTAACT
CGACTTGTCGATCGATGCCGCCGCGCGGAGCACCGTGTTCGACCACTACC
CTGGAGTTTGTACTGGAAGGGCCCTGTGTCGATTGGAATATGTACAGGGT
TGGATATATCATTCAGCAACCTGAGTTTTTTGTTCATTAGTGTGACATTT
TACACCATTTTGAAGTCAGGAGCCATCCTGTGGATTCTGGTTTGGGCTGT
GATTATGCGTTTGGAACCTTTGACTTGGGAGATAGTATCTATATGTGCCG
CGGTAAGCTTTGGAGTGGGCCTCGCTTCTTATGGAGAGACCGCTTTCAAT
TCGGCTGGCTTCGTGCTAGTGACCCTGGCCTGTGCGTCCTCCGGGCTGCG
CTGGGCTTTAACCCAACTTATGCTGGAAGGCGAATTAAATGGCAGAGATG
ACTCGATGTATCGATCCGCTTTGATCGGCCAATTGAGTAGTGGAAGAAGT
GATGTTGATGGAACAGGGGGAAACGCTGACAGCGATTGCAACATTCAAGG
GCGTTCTGATCCTCGCGACTGCGGGCGCCATCGATGTAACACTGCCAGGG
ATCCCCCTCTGGTAGATCACGCGCACACTCCCGTCAATGGTTCAGAGGCG
CACTCTGTCTCGGTTCAACATCCACAGGCTTTTGAGATTTTATACCACTT
AACGCCTGCAAGTGCGATTATTTGTGTCGCAGCTTTTCTAGTTGTAGAAT
GGAAGTCTTGCGTCCAATCTCACGTTTTCAAGGACTTAGCCTTACTTTTT
CAGCTTCTGGCCATCCTACTAGTGGGAGGTCTCATATCTTTTCTGCTGGT
ACTTACGGAGGTGAAGCTTGTGAAAATCAGCTCCAGTTTGACCATGAGTA
TGTTTGGTGCATTGAAAGAG back to top
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