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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100007g109.6505.mrna |
| Orig protein id | gnl|cribi|Naga_100007g109.6505 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:723011..725086 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1474 ID=rna1474|Name=rna1474|organism=Nannochloropsis gaditana|type=mRNA|length=5238bp
AGCTGTAATTTTTCCCAGCAAGTTCTTCTACTATCAGTATCGAGTCGTTG
GGCGTGGGGCAATTAGGACTGAATTTGGCCATGTCCTTATCTCTTTTGTC
TCAAACATGCAGGCCATGCGTTCACACAAGTTCACGGGTAAACACAGCTT
TCGCTTGAGTGTATGGAATCCAATGTCACAGGGACGGGAGGATGACTCCA
TAGATACGCTTATGAGACGCCTGTACGTAATGCCGAAGCAATCCAGCAGG
CTGGTATATGCTGGTAATTATTTTGCAGATGATGAAGATGAACAAGACGA
CGAGGATGAAGCTAGCATTCTTGCGAGTAATTCTCGAAGCGTGTATGCCC
GCAATATGGCAATTGCTGGTAACGGTGAAACAATATATGAAAATATAACA
AGCATGTCTTCCCGAAGTCGAGATCCACTTTGGAGACGGGACAGCAACTT
GTTGGAAAAAGACAGCATTATGCCTGGTACTGGAACCATTTTTTTTGACG
AGGACAGCCAAGAATTCGTGGGGAGGAAGGACAGTAATGATGGCGACGAC
GAGGACGACAGCTTTGAGCCGAAAATTTCCCCCGCACACCGTGTACATAT
ACAGAATATGGCATTTTTAAATTGTATACAACGTACAAGGGCCACTGTTG
GTCATTTTATACCTGTTGCACGTTCGGAAGCGGGGTCCTTGCCGCGCTCT
GAGAAAACATCCTTAGCTACGCAGGACGAGTCCCTCCTTTCCTCAGATTT
TGATGCGACACTGTATATTATGAGAAGATTCTCCACTGAATCCTTTGAAT
CAGAGAAATTTCATGGTTTCGTAGAGAGGGAGCTGAGAGAGAAGGACATG
TCGAAAGTGTGTGTGATTACGGAGCTGGCTACTCGGGTGGAGGCTAATTA
TCAGGTGCTTATCCAGGGTATGAAGAATGTGCACGAGATCGATTTGTACC
TCAAATCAACCAGCATGCAGACTTGGGAATGTCGCCGCCGCCTGAACTTA
ATGGATTGCTCTATACGAAAACCTTTCTTGGCCATCCTACAAAAGAGCAT
ACGTCGGGAGAATTTGAAAAGGATTCAACACGTTCTTAAGAGAACACGCA
CTGTGCTTATATTGCAAAGTGAAACAAAGACAGCGCTGAAGAGTGAGCTG
TACCAGCGAGCTGTAGCCGCTGCCACAAATGCAAAACTTGCTCTTGACAG
CGATGTGCTGAAAGGAGTGACCATGCTGGGCACAAGCACCCAAGCCTTAA
ACAAGCTGCTGCCGGAAGTGCGCCTCGCTGTCGACAGGAGGCTACGCCAC
CTATGTAGCATCAGAAGTGATAGCAGTGCTGCCATATTTTCAACAGAGTA
CGCATGGATATTGCGAGCGTATAACAGACTGGACGCTCACGGAATTCGAC
TATCAAGCAAACCACGGAGCACTTCAAACCCGTCACCCTCTGATGGAGCT
AGTGCGGCTTCTCAAGACTCGTTAAATGATGATATAGTCCCTGTCGCACC
TGCTGTAGACAAGGGAGGAATCACGGGTCTCAGCGAACGCATTCAACGCT
TTACTGCTATGGAATTGGAGTACTGTACGAAGGTCGCCATAATTAAGGCA
TGCACGGTCCCCATAAGTGTCTCGCAAGGCGCCTCGGTGACGGATAGGAA
AGGTGCCAATGTCAAAGATCCCTCAGAAAACCCCTCCACGTTTCAGTTTG
CTCCCAGTCTCTCATCTAAGAATGCGAATTACGCTCTTAGTTACAGTAAA
ACGCCGCATCACCCCGAAAACATGGGCTGTAATGCGCCTGTGACGGAGCG
TGACGTGCACGGTCGCATCGTGGCATTTAAAGGAATGCCATTGAATTTGT
GGACAATATCGGATTTAATCAAGCAGCTACGACCAAGAACTGCACTTCTG
ATAATCCGTGAGCTAGCCCAGCAAGCAACTGAGTTATTGCATCGTTTTTT
CCTGTTGTTGCAGTGGCATCGAAGTCCATATGACTCACGCAACACCGAAG
AAAGCTTTCTACATCGTTCACCACACCTCGTAAAACGAGATAGTGAAATG
TCGGGGGGTTTGAGCGATGATGAAGACGAAGACGAAGAGGAACATGGCAC
TGAAGGTAGCTTTCTCTTTTCGGCCCGCCAAGAAGTTCCTGTCGTGGCTC
TCTCAAACTTTAGCATCGGGCCAAAAGGCGGCAGCTGTAGTTGCGATCAA
GCTCACAAGGAATGTCAAGCTACCCCTCCTGCGTTCCCAGAATTGAGTGC
AGTGGAGGTAACGGATCTGCCCTCCCATAGTAAAGACTTTCTCATGCGCG
CGCGTCTCTCTGTAGTTGCAAAGGGACTTAGGCAAGCTCGAAAACAGCTG
TGGTTACCACTGGAAAGGACGGTTATAATGCTTTTGAACGAACAGGAAGT
CAATTTGGATGGTCTTGTCGAAGCCGTCGCTACAGTAGAAATGTTAATTG
CTCTCGGGGAAGAGTTTGGAAACAATGATCCTGCGGCATTGCGATTCGCG
ATTCATACCATTTGTGTGCATTTCAGAGAAAAAATGCACCACGAGTGCTT
TGGTGCGATGCAACAGGCAATAGATCGAGAGATATGGTACAATGTCCCCA
TTCCCGTAGAAGAATTTGGGGGTGTCACGGGCCTCATCAAAAACTACACG
CAGCCCCTAGCTTGGCCATTTAAGAATGGTTTCGGTCGGCACGCCAAAGA
ACGGGTGCAGCGCAAAAGCGGTGGGGAAAGCAAGTCTCGATCGCAAAGCT
TTTCAACTGGTTCGACTCCTCCAATCCTAGCTAGCTTTCCATCGAGTGGC
AATCCATTTCTTATTCCGTCAACTTCCGAAGAATCGGCCTCCGACCCAAC
CTTGTATATACTCCCTTTTCCCGCGGACCTTTTAGATCCAATGGCTCCTG
ATGATATGGACAACAATGAAGAAGACCCACGAATGAGTCCTACGCTTCCA
AGTGTCCCATCAAACACTGTCCAGTCACCCTTCCTTTGGACGATAACTCA
AGCTTCGCTCAACGGATTCGCGAAACATGCGGGCCGATATTTCCAGCTTA
TGCAAGTTTACCCGATTACTGCCAGGGAGACTTATGATTCGTTGCTTCAG
CTCCTTGACTTTTACGTATACATGGTTTTCGCTATTTTCGTACCTGAGCA
GTCAGCAGAGCTACTTTTGAGTCAGTTCCCGCAATTGAATAAAGAGTCTA
GCTTTGCAGAGGAGATGTCATGGGCAAGTCAAGATATTCATATCCCATTG
CCGGTCGAGATGGAGCAGGAGACATCACATTTGAAGTCTTATCTCACAAG
AGTCCATGATAATTTCATAGAAGAAGACTGCTGGGGACTAGGCATAGGCC
TGGAAACGGCTGACAGGATTAGAAAGCTTGGTGCCGATACTGCGAAAAAA
ATAAATGCGATGGCGGCAGCCACTGGTGTACCTAATAATTTTACCATGTC
AGCTGTGGCATCACGTGTTACAAGTCCACGTGCAGGAGTAAACCGTTTTT
GTGAAGATAAATGGTGTGATATTCGGGAGCAGCATTCGGACACAGTCGGT
GAGGATAGTGAAAGAGATGGCGAAAAAGATCGGGAATATTTCAGCGGTGC
AAATGTCCAGCCGCCATTCAAAATCAGGAAAGTGCGTTTTCAGAGACCTG
CAAGCATTCAATTAGCTTTGGAAGACCCTCATTCATTACATGGTCTGTCG
TATAGAGCTATCGCGGTAGAGTCTTGCTTCTTCCTGCTTGAAATCGTGAA
AAAATTTAAGCCCTACTTTGTTGCTCTAATACAAGAGCATAATGACGATA
TTGATAGCCAAGAAGGTGGTGACCACCTTCAGTTTGTTGGAGAGGCAATT
GCACAGCTTCGCACATTCATTTATCGATGTACAGCCCCTCGCCTAGTTCG
TGCATCTTCGATAGTTCGATTGGTGGAATCGCAAGTGTGGCATCATAATG
TCATTCGTGAAGAGGCCAATCCTTACACAGAGAGGATTTGCGTATTATGT
CGTCGCATTTGGGAAAAGATCAGAGGACCCGAGGAACGTGGAAGTGCAAA
ATTAGATGGACTGGATAATATGTACATTCCTTCCGAAGCCAAAGTTCTGA
TCTGGACGGAGGTCGCTCAGTGTATCATGGGAACCTTACTAGAGGGTTTC
TCGCGGATAGATAAGTGTTCAACAGAAGGGCGTTCCCTCATGAGTATGGA
CCTTCAAGCCATACAGGTAGGATTGGACGAAATTCTGCGGGTGCGGCCGG
CTCGTGGTAGAGCATATGTAGAAAACTATATCAAGGCCTTCTACTACGGG
CAGGTCGATGTCATGAGCTGGGTCGAAAAAAACTACAAATTTTATCATTA
CAGACACATTGCGGGCCTCTTCGATGCTGCAATAGGCCAAAAACGCATTG
TCCGAGTCTTTATGAATGAGACAGTACAGCTTTATCACTCACTAAGAACG
GAGACCTCGGAAACTGAGAAAAGCAATGTATGATGTTGCTTTTCATGTGG
TCTGGTCTGCCTTTGACTTCGAATCCGGGCTTATGCATTTCATCGAAGCT
GATATGTTCCGATGCGAATTTTTGATGAGCCCAAGCACAACACATTCGGA
CTGAAGAAATTAGGGTGCAGTGTGTCAAAGACTTCAAGGGAGAGGAATAA
TCCTTTGACAGATCTCATTTTTTCGTTGTTGCAAGAAATTGAGTACATAG
AATGTGGGTGTACACCGAGAGAAAGCAAACTTTTGGCGGTTTGATTTCAA
ATGTGTCTCCTTAAAATTCTTGCCTTAGTCTACAGATATCGGATCCGATG
AGATGGAAAATTTTTTTTTTAACGCTGCACAGGCGGAAACAGAGTTTATG
TTCCCTCCCGTCTCAAAGCCATTTTTCGTGTAGAGTCATCCATGAAACAT
GCATATTTCTCTTGTACCATGCATACATAAGTAAACCTGGCAGAAGACGA
TCCAGGCATTCGAATTGGCTACCCGAACCCAGCACATTGAAAGATGAAGC
AGCGAATTTAACTTTCACTCTGAGAGTAACTATCCAAGCAGTAATTGTGT
GAGAGCGTGACATGTTGATATTCTGCTTTCTGTATTGTACACACGGTTTT
CTTCATCTTTTACATATGGGTAGAAATATGTGGACAACGTTTTTCACCTA
ATGAACGAGTTCCTTGCCTTCACACCTGTATGACTGGATGGTTGATACCC
CGAAATGTGGTCCCGTTACCGCTGAAAAGCCTCAAATA back to topprotein sequence of rna1474 >rna1474-protein ID=rna1474-protein|Name=rna1474|organism=Nannochloropsis gaditana|type=polypeptide|length=238bp
MFAGSQESSQEALVKILEHLKNTKLEYEERIFALNAKLKAMKSVVKESDI
RQAQMEDELDFRKSELEELKRQQLQKHRLERLDDWKALVQQLQADRRRLG
EEVDHLQKEKQLLVMELKEHEQEKGKTSSSIFHDHLHCEMDGVRGSGGRH
SEYEAKFSLPRDELAFEEVRFLQERVEVLENKNRRAHVEIKRLLEQVRRR
DGLLQAWGRVAGSLGNYLRLFSGNGTTFRGINHPVIQV back to topmRNA from alignment at CM002457.1:723011..725086- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1474 ID=rna1474|Name=rna1474|organism=Nannochloropsis gaditana|type=mRNA|length=2076bp|location=Sequence derived from alignment at CM002457.1:723011..725086- (Nannochloropsis gaditana)
GAAAGTGCACGCTGTACGTAACGAACAATGGTCTCTTTTCTGTGGTCAGG
AATGATTCTAACGTGTTTCTTATTCCATCGTTATCCAGCTGCTTGTGTTT
GGGTTGCTATCATGCATTACAGTTCCTTTTTTATGTTAGCGTTCAGTTTC
AGAGCCAATCGCTGCTTCCTTCTTGACAGATCGCTCAGACTGCGTTCTCG
TTCGTTGTTTCCAGAATTGAAGGCCTTCTTCATGCCGCACTCCTTCCCCC
CCCTTTTCTTTCCCTCATTCTCACTTTTGCGAGCGCGTTGCACCACGACT
CCGTGCTCATCAGCAGCTTAAAGTTTCATGGCATTTCACTTTATCGTTTA
GAGCGTAGGGAAGAAACTCTGTTGAATGTGCCCGTCGCCCTGTAATACCA
TTAGTTTACTTACTACTGAGGTTTTACGCTTACCTGTCCTGATATTTTAA
CATGATCCGCTCAGCGGTCACTAAGACTGCTTAGCTGGTGTTGTGGTATG
AGATCTTTCTGGCAAAATTTCTAAGATAAAACGGATGCCTCTCCGTCAAC
CCATGTAGCTCTCCTCAGACTTGGTCTTGTAATCCTGTTCCCTCTCCTAT
ACAGGTTACGTCGCCAATCCTTCCCTTGCGGTCTCCGTAATATTAATTCA
TTACAACCTTAGAATCGCGATTTTTTGCGATGTTTGCGGGATCGCAGGAG
GTGAGATTTACGCTGGCTGGCTCAAACGTTTGATTGTGTTTTCTCTCAAA
AAGCTCAAGTCTTCCCCGGAATTACTTTTATCACAAGTCATCACAGGAGG
CATTAGTAAAAATACTCGAACACTTGAAGAACACTAAGCTCGAATACGAG
GAACGCATTTTTGCGCTAAATGCGAAGCTCAAAGCCATGAAGTCTGTCGT
GAAGGAAAGTGATATTCGGCAAGCCCAGATGGAAGATGAACTTGATTTTA
GGAAAAGCGAGCTCGAAGAATTAAAGCGACAACAATTACAAAAGCATCGT
CTTGAAAGACTAGACGACTGGAAAGCCTTGGTACAACAACTACAAGCGGA
TCGAAGGCGTCTTGGTGAAGAGGTCGATCACTTGCAGAAAGAGAAGCAGC
TATTGGTGATGGAGCTCAAGGAGCATGAACAAGAGAAGGGGAAGACGAGC
TCGAGCATTTTTCATGATCACCTACACTGTGAGATGGACGGTGTCAGGGG
GAGTGGAGGAAGACATTCAGAATATGAAGCTAAATTTTCTTTGCCAAGAG
ATGAGCTTGCATTTGAAGAAGTCAGATTTTTACAGGAGCGTGTTGAAGTT
CTCGAAAATAAAAATAGACGCGCTCATGTTGAAATCAAACGGCTTCTGGA
ACAAGTTCGGCGGAGAGATGGCCTCTTGCAAGCGTGGGGACGAGTTGCGG
GAAGTTTAGGCAATTATTTGAGGCTTTTCAGCGGTAACGGGACCACATTT
CGGGGTATCAACCATCCAGTCATACAGGTGTGAAGGCAAGGAACTCGTTC
ATTAGGTGAAAAACGTTGTCCACATATTTCTACCCATATGTAAAAGATGA
AGAAAACCGTGTGTACAATACAGAAAGCAGAATATCAACATGTCACGCTC
TCACACAATTACTGCTTGGATAGTTACTCTCAGAGTGAAAGTTAAATTCG
CTGCTTCATCTTTCAATGTGCTGGGTTCGGGTAGCCAATTCGAATGCCTG
GATCGTCTTCTGCCAGGTTTACTTATGTATGCATGGTACAAGAGAAATAT
GCATGTTTCATGGATGACTCTACACGAAAAATGGCTTTGAGACGGGAGGG
AACATAAACTCTGTTTCCGCCTGTGCAGCGTTAAAAAAAAAATTTTCCAT
CTCATCGGATCCGATATCTGTAGACTAAGGCAAGAATTTTAAGGAGACAC
ATTTGAAATCAAACCGCCAAAAGTTTGCTTTCTCTCGGTGTACACCCACA
TTCTATGTACTCAATTTCTTGCAACAACGAAAAAATGAGATCTGTCAAAG
GATTATTCCTCTCCCTTGAAGTCTTTGACACACTGCACCCTAATTTCTTC
AGTCCGAATGTGTTGTGCTTGGGCTC back to topCoding sequence (CDS) from alignment at CM002457.1:723011..725086- >rna1474 ID=rna1474|Name=rna1474|organism=Nannochloropsis gaditana|type=CDS|length=1434bp|location=Sequence derived from alignment at CM002457.1:723011..725086- (Nannochloropsis gaditana)
TCATCACAGGAGGCATTAGTAAAAATACTCGAACACTTGAAGAACACTAA
GCTCGAATACGAGGAACGCATTTTTGCGCTAAATGCGAAGCTCAAAGCCA
TGAAGTCTGTCGTGAAGGAAAGTGATATTCGGCAAGCCCAGATGGAAGAT
GAACTTGATTTTAGGAAAAGCGAGCTCGAAGAATTAAAGCGACAACAATT
ACAAAAGCATCGTCTTGAAAGACTAGACGACTGGAAAGCCTTGGTACAAC
AACTACAAGCGGATCGAAGGCGTCTTGGTGAAGAGGTCGATCACTTGCAG
AAAGAGAAGCAGCTATTGGTGATGGAGCTCAAGGAGCATGAACAAGAGAA
GGGGAAGACGAGCTCGAGCATTTTTCATGATCACCTACACTGTGAGATGG
ACGGTGTCAGGGGGAGTGGAGGAAGACATTCAGAATATGAAGCTAAATTT
TCTTTGCCAAGAGATGAGCTTGCATTTGAAGAAGTCAGATTTTTACAGGA
GCGTGTTGAAGTTCTCGAAAATAAAAATAGACGCGCTCATGTTGAAATCA
AACGGCTTCTGGAACAAGTTCGGCGGAGAGATGGCCTCTTGCAAGCGTGG
GGACGAGTTGCGGGAAGTTTAGGCAATTATTTGAGGCTTTTCAGCGGTAA
CGGGACCACATTTCGGGGTATCAACCATCCAGTCATACAGGTGTGAATGT
TTGCGGGATCGCAGGAGTCATCACAGGAGGCATTAGTAAAAATACTCGAA
CACTTGAAGAACACTAAGCTCGAATACGAGGAACGCATTTTTGCGCTAAA
TGCGAAGCTCAAAGCCATGAAGTCTGTCGTGAAGGAAAGTGATATTCGGC
AAGCCCAGATGGAAGATGAACTTGATTTTAGGAAAAGCGAGCTCGAAGAA
TTAAAGCGACAACAATTACAAAAGCATCGTCTTGAAAGACTAGACGACTG
GAAAGCCTTGGTACAACAACTACAAGCGGATCGAAGGCGTCTTGGTGAAG
AGGTCGATCACTTGCAGAAAGAGAAGCAGCTATTGGTGATGGAGCTCAAG
GAGCATGAACAAGAGAAGGGGAAGACGAGCTCGAGCATTTTTCATGATCA
CCTACACTGTGAGATGGACGGTGTCAGGGGGAGTGGAGGAAGACATTCAG
AATATGAAGCTAAATTTTCTTTGCCAAGAGATGAGCTTGCATTTGAAGAA
GTCAGATTTTTACAGGAGCGTGTTGAAGTTCTCGAAAATAAAAATAGACG
CGCTCATGTTGAAATCAAACGGCTTCTGGAACAAGTTCGGCGGAGAGATG
GCCTCTTGCAAGCGTGGGGACGAGTTGCGGGAAGTTTAGGCAATTATTTG
AGGCTTTTCAGCGGTAACGGGACCACATTTCGGGGTATCAACCATCCAGT
CATACAGGTGTGAATGTTTGCGGGATCGCAGGAG back to top
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