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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100119g9.7992.mrna |
| Orig protein id | gnl|cribi|Naga_100119g9.7992 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:618624..622235 - |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1433 ID=rna1433|Name=rna1433|organism=Nannochloropsis gaditana|type=mRNA|length=1915bp
ACACGTTATTGGCGTGCATGTCGACTCTTCCGGTGCAACACGAGATGGTT
GGAATGGTGTCAGCAGTATGGCCGCGTAACATCATGACACCCCAGCTTTG
GGGAATGCTGTGCATTATGGCGAGCATCGTCTTGGTAGCTCGGCAGCGGA
CACAGTCGTTTCCTCTTCAGTCCAAGCAAGGGAGAGCTTCCAACCCGTAC
CAAGTGCTGGGCTCTGGTGATGTGGCCTCGGGCGTGCGATACAAACCACA
GACATACGACGATGGTTCTGACAACATTTCATATAAGACACTTGTCATAT
ACGTGTACCATGAGAGCGATGCAGTCACGAAGGAGAACTTACAGTTTTTT
TTAAAGGCTGGTGTAGGAGATGTGGAAGATCCGCTCACCGACTACGTCAT
TGTAGTCAATGGGGAAACAACACTGGACTTGGACGGGCTGCCCCCCAACG
TGCGCATAAAATACCGGGACAACACTTGCTACGACGGGGGCAGTGCTGGA
GTAGTTTTGGCTGAAGTTAACATTGCAGAATATCACTTTTTCATCATCAT
GAACAGCTCGGTTCGCGGGCCTTTCCTCCCCTCCTACTTCTCTCACACTG
CCGGGGGCGGTCTGGGAGTTGGTTCTTCCTTATATGCGCAATCGCGGCCG
TGGACGACGGCTTTTACGGATCTTTTAAACTCCTATGTCAAACTGGCGGG
CACCACCATCAATTGCGAGGTGCATGTGCATGTTCAATCCATGCTGTTGG
CCACTGACTCCGTCGGCCTGAAGATCTTGATCGATTCGGGTGCATTCGAG
TGCGCGCGGGATCGGGATGCTGCCATTGCCAACTACGAGTTGGGTGCCAG
TGCCCGGATCATGGAAAATGGGTATAGCGTCGACTGCCTTATGCTCCGGT
ACGCCGGCGTAGATTGGCTTTCACTCAAGTCACCGAAATGTAATCAGTTG
CTGAATCCGTACGTGCCGCTCTACAACGACGGCATGTCCCTCAACCCCCT
GGAGGTGGTATTCGTCAAGGTCAAGCCGCACACGCTCGCTTCCGACCACA
CTGTGCAGCGCTGGACGGACTACGTGCTCGGGAGGGACGACCTGGTGAGT
AGTTTCTTTTACAGCTCCACCGTCCAGCGTGTAGTAGCGGACAGGCGAAA
GCGGTTGGAGCGCATGGTGCGAGACTGCGACGCCTCCTTCGACCATGCGA
GCTTCCTCGAACGGCACCCAGAGCTGGACCCAGCGGCCAAGTCTGCCAAC
TACGAGCTCTTCCTCGACAAATACCTTTTTTCCGGTGAGCCTTACCGCTA
CACAGTACCACACAAGAGGGAGGAGGACGTTCCACATCTATACTGTCGCT
CCTTTGTCAAATACGGGGTTCCCGACTTTTCAGACTGAGGAATTTGTGAG
AGGATAGGTTAGAGGACTCCCTGCAAAATATGCGACCATGGAGGAGCTTG
AAAACTGTACAGTTCGGATGTAACAGGACGTTAATGCGAATTGGCGTCTC
GGACACGTGCCCGGGAATCGCCACGATGGACCGTGGCCGTGGAGCCCCCG
TCACTTACATTGATAGTCAGGCAAAGTGGCTTGATATTACAAGCCAAAAT
CAAAGTCAACGACGGCTGGCATTTATCTCTGGTTTCATGGGATTTAATAT
TTACATGCTTTGCTTAACGTTGGCGATGTAAAATCTTCCAACAGCGACAA
AAAGGACGCATCGCAGGTATTTGACAACGATAGCACGTTTCATCGCACCT
CGAATTCCGTACGTATGAGACCCCTCCGTTCTCTCATTGGACGTGGTTGG
ATGTGAATTCTACAAATCTGCGTGCATACCACTTAGGATCCACAGCAGAT
ATCTGGCGAGAATCGTACTTGAAGCTTTTGAAAAAGGTCTCTGCCCGCTT
CAAGGCATTGTATTG back to topprotein sequence of rna1433 >rna1433-protein ID=rna1433-protein|Name=rna1433|organism=Nannochloropsis gaditana|type=polypeptide|length=327bp
MACFQRRRAKKGQKRAFLGPLTPSPYPKINRPRYRGGGGVEPFLFRNLRH
AQRHARRAPCLGGGHPQAPGRPGGQRQGAGGAHSEWGGGRIDARRGSWYR
AGRLSQVLRELRGARNSFVLQLSAPAARGRHPCSKGARCKRGRTPGPSRI
RAHVFQQQQARGGPGHSLEDFRAAADGASGSDGGAATEKAAQFSGQRDQG
RARAVHADDRDDAGHSCGGGKAAADGRPYPDGFHAGGQVLVPPQGVQQAP
SPNPAAPPLARLQVQGLRAQDFPPHPPALRGGLGLLHALCLRELQLPRVH
VQFQVGAVLLLLARWPVHDQNPNIGGE back to topmRNA from alignment at CM002457.1:618624..622235- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >rna1433 ID=rna1433|Name=rna1433|organism=Nannochloropsis gaditana|type=mRNA|length=3612bp|location=Sequence derived from alignment at CM002457.1:618624..622235- (Nannochloropsis gaditana)
CGGAAATTTTTAGCCCTGCCTGCACGACATGGCTTTTCAGAAGATGCACT
GACTGCTTAATTTGACGCAAAACGCGGGTCACAACATAAGAACAATAAAC
CAACACGGTGATGTATTGTTCGCCCGTAAGAGCGTTACAAGCAGGCGGGC
GTGTCCATCCCAGATGGCCTGTTCCTTGTTTGGCGCTGTAGCCCCTTTCC
CCTCTGCCACTCCGCCGAACCATTGGAACGCTTATTTGATTCCCGATAGC
ATTTGCACCTAATCCTAAGCTACTGTACGAGCCTCAATTGGTCAGCGTTC
GGGGCTTGGAGCTCAATGGACGCAAAATGGCATCCCACGTGATCTGAGAC
CACAGGGCCGTGGGACTTCTAGCTGTGCGTCTGCCTCAACTTGTTATTCA
CTAACGAGGAGAGGGGACACTCCGTTCCGGCTAGACACCATAGCTTACGT
TTTGCATTGTCGAAGGTACAAATGCTATGTGGATTTCTGTGCGCTGAAAA
CTGAGCCGAACGGCAGAAATTGCAACGTGACCTGGAATTGTTCCTAGCCC
GATCTCGGCTCGAGTATCTGGACACAATACGACACGTGGACTGCCAGGTT
TGCGGTGGCTCGTCTTGACTGGGCGGCGCGAGTAGATTGGCCATGTAGTG
GGATAGGGAAAGCCCTTCGGTGGTAATCAAGGGGAGACCCCCAGTGGCTC
AGGTGTTGAGTGTCGGCAGTTTGTGCGAATGTAGTCTTGGCGGGCGTCCT
GAGTGTACATTGCGTCTGAATGCGCGATCAATGTGCCATTAACGATCACC
GTGATAAAGCCATAAGCTGCTTATATAGAGGCTTACTGCTCTGTAGCCCA
CGCTGATATCTCGAGCACGCCGGCGTCCTTTAAGAGCCATGACACACACA
TACCACTGTGCTTAAATATCACTAACACATTGGTACAGGTCAACTCTGGA
GGCCCTTTTGTACTGTGCCCTACCTCCCATCCTTCCAAGCCAGAGGGAAT
GGAGTCGGGGGGTATCAGCAAGCTGGTCCACCTCGTGAACGGCGCCGGGG
GCTCCAGCGTCCTGAGGAAGCCCGAGGGCAGGGTCTCCGACTCCTCCAGT
GAGTGCGATGGGGGGGAGTATAGACGGCTTGACAACGAGGGCGGGAGACG
AGATAGAAAGCGCTGAATGCAAGCTTTGGACGTAGATGGCATGCTTTCAA
CGGCGTCGTGCCAAGAAGGGTCAAAAGAGGGCTTTCCTAGGACCTCTAAC
CCCTAGCCCTTACCCTAAAATTAACAGGCCCCGATACAGAGGCGGAGGAG
GAGTCGAACCATTCCTCTTTCGAAACCTCCGCCACGCTCAGCGTCACGCC
CGCCGAGCTCCCTGTCTTGGCGGCGGCCATCCCCAGGCACCAGGGCGGCC
CGGGGGTCAGCGACAGGGAGCCGGTGGAGCTCACTCAGAGTGGGGAGGGG
GGCGGATCGACGCAAGAAGAGGAAGCTGGTACCGCGCTGGAAGACTTTCC
CAGGTCCTCCGTGAGCTCCGGGGGGCGCGCAACAGCTTTGTCCTCCAGCT
CAGTGCTCCAGCCGCCCGAGGACGGCACCCCTGCAGCAAAGGCGCTCGCT
GCAAACGCGGCCGTACCCCGGGTCCCTCGCGGATCCGTGCTCATGTCTTC
CAACAGCAGCAGGCCCGGGGGGGTCCGGGGCACTCGCTTGAGGACTTTCG
GGCGGCAGCTGACGGCGCATCAGGCAGCGACGGCGGCGCGGCGACGGAAA
AAGCGGCGCAATTTTCAGGGCAACGTGATCAAGGGCGAGCACGAGCAGTA
CACGCTGACGATCGGGATGATGCTGGGCATTCGTGTGGCGGTGGGAAGGC
CGCAGCAGATGGACGACCTTACCCTGATGGATTTCATGCAGGTGGACAAG
TACTTGTTCCCCCCCAAGGGGTGCAACAAGCCCCCTCACCGAACCCCGCC
GCACCACCTCTCGCACGACTTCAAGTTCAAGGACTACGCGCCCAAGATTT
TCCACCGCATCCGCCAGCTCTTCGGGGTGGACTCGGCCTCTTACATGCTC
TCTGTCTCCGGGAACTACAACTACCTCGAGTTCATGTCCAATTCCAAGTC
GGGGCAGTTCTTCTTCTACTCGCACGATGGCCGGTTCATGATCAAAACCC
AAACATCGGAGGAGAATAAATTTCTTCGAAAGATCCTCCCACACTACTAC
CAATATGTCTCTCTCAACCCCAACACCCTTCTCACGCGCTTCTACGGCAT
GCACCGCGTGAAAATGCGGCATTTGAAGCGGAAGGTCCACTTTGTCATCA
TGCACTCAGTTTTTGACACGAAAGAAAAGATCTACCGCATCTACGACTTG
AAGGGCTCCACCGTGGGTCGGTCATCGGGGCCCGACAAGGCGCGGAAGGA
GGGCGTTGTCTACAAGGACTTGGACCTGGTGGACGACCACATCAAATTCC
AACTGGGGACCAAGCGGAGGTTATTTATGGAACAGCTGGGGAGAGATGCC
TCCTTCCTGGCCTCTCTGAACATTATGGACTATTCGCTCTTGATAGGTAT
ATACGACAAGACCAGGTACGGCGTGGGAAAGTGAGAGCGATCATGAGAAA
AGGGAAGTCTGTGGGGGTATCTTGAATGGCCTGAATCCTCCGCACGCACA
ACCATACGTTCAACTTAGGCGGGACGAGTCCTTGGAACGGACGCAGTCCG
TTACCAAATCTGCTACAGGCCGTGGAGGTGCCGAGACCGCGGTGGAAGGC
TTAGAAGACGACACGCTTACGCCCTTGGGCGTCTCCTCGCACCCATACGT
GGAGGGCGCAGAGCCGCTGCACCATCACCCCGTTCAGCCACACCCACACC
CCCCTCTGCCCAAACACGCATCACTCCCGCCGTCTACGCTGCCCTCACAC
GGTTTATCCCTACGGTCGCGCCGTGAAAATAGCCACGGGTCTGAGGGTGC
TCGCAGTCAGAGCTTTGGAGGAACTGGCCACGGCTACTTGGAGGGAGAAA
GACCGATGGATGAACATTTCCACAGCGACGACGATTCTGATTTCGACTCG
GAAGCCTCGCTGGAGTCAGACGAGGATGACATTCCCTTGCCTCCCTCAAT
ACTTCCCGCGGGCTTCAGCGGACACAGCAACAGTGAACACAGTCATGCCA
GCGACCGACCAGGAAAAGGGTTGCCTACGGAGGCTTCGATCTTGACGTCT
GCCACAAGCGAGCGGCGCTTGACACACCGACGAGACCATGGGGTACAAAG
TCGCCTCGCGGATGGCACGAAAGGGAACGAGGTTTATTTTGTGGGAGTGA
TCGATATTTTACAGCAATACAATGCCTTGAAGCGGGCAGAGACCTTTTTC
AAAAGCTTCAAGTACGATTCTCGCCAGATATCTGCTGTGGATCCTAAGTG
GTATGCACGCAGATTTGTAGAATTCACATCCAACCACGTCCAATGAGAGA
ACGGAGGGGTCTCATACGTACGGAATTCGAGGTGCGATGAAACGTGCTAT
CGTTGTCAAATACCTGCGATGCGTCCTTTTTGTCGCTGTTGGAAGATTTT
ACATCGCCAACGTTAAGCAAAGCATGTAAATATTAAATCCCATGAAACCA
GAGATAAATGCC back to topCoding sequence (CDS) from alignment at CM002457.1:618624..622235- >rna1433 ID=rna1433|Name=rna1433|organism=Nannochloropsis gaditana|type=CDS|length=984bp|location=Sequence derived from alignment at CM002457.1:618624..622235- (Nannochloropsis gaditana)
ATGGCATGCTTTCAACGGCGTCGTGCCAAGAAGGGTCAAAAGAGGGCTTT
CCTAGGACCTCTAACCCCTAGCCCTTACCCTAAAATTAACAGGCCCCGAT
ACAGAGGCGGAGGAGGAGTCGAACCATTCCTCTTTCGAAACCTCCGCCAC
GCTCAGCGTCACGCCCGCCGAGCTCCCTGTCTTGGCGGCGGCCATCCCCA
GGCACCAGGGCGGCCCGGGGGTCAGCGACAGGGAGCCGGTGGAGCTCACT
CAGAGTGGGGAGGGGGGCGGATCGACGCAAGAAGAGGAAGCTGGTACCGC
GCTGGAAGACTTTCCCAGGTCCTCCGTGAGCTCCGGGGGGCGCGCAACAG
CTTTGTCCTCCAGCTCAGTGCTCCAGCCGCCCGAGGACGGCACCCCTGCA
GCAAAGGCGCTCGCTGCAAACGCGGCCGTACCCCGGGTCCCTCGCGGATC
CGTGCTCATGTCTTCCAACAGCAGCAGGCCCGGGGGGGTCCGGGGCACTC
GCTTGAGGACTTTCGGGCGGCAGCTGACGGCGCATCAGGCAGCGACGGCG
GCGCGGCGACGGAAAAAGCGGCGCAATTTTCAGGGCAACGTGATCAAGGG
CGAGCACGAGCAGTACACGCTGACGATCGGGATGATGCTGGGCATTCGTG
TGGCGGTGGGAAGGCCGCAGCAGATGGACGACCTTACCCTGATGGATTTC
ATGCAGGTGGACAAGTACTTGTTCCCCCCCAAGGGGTGCAACAAGCCCCC
TCACCGAACCCCGCCGCACCACCTCTCGCACGACTTCAAGTTCAAGGACT
ACGCGCCCAAGATTTTCCACCGCATCCGCCAGCTCTTCGGGGTGGACTCG
GCCTCTTACATGCTCTCTGTCTCCGGGAACTACAACTACCTCGAGTTCAT
GTCCAATTCCAAGTCGGGGCAGTTCTTCTTCTACTCGCACGATGGCCGGT
TCATGATCAAAACCCAAACATCGGAGGAGAATAA back to top
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