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Properties
| Property Name | Value |
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100119g8.7995.mrna |
| Orig protein id | gnl|cribi|Naga_100119g8.7995 |
| Gbkey | mRNA |
| Note | encoded by transcript variant 1; alternatively spliced |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| CM002457.1 | supercontig | CM002457.1:616590..618921 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1432 ID=rna1432|Name=rna1432|organism=Nannochloropsis gaditana|type=mRNA|length=2440bp ACGCATGTCCTCGGTGATACCAACATTCCATTGCTCCTGCTCTGTTGAGG TATTTCGGTGCATTGTGTGCACTTTCTCACCCTCAATGAAGTCGTGGAAC TGTGTAATATGGCCGCCAAGTTGGAAAGGGCCAAAAAGGTGCGCACCTTG TCACCACTGCAGCTTTCAAGGCGCGTCATTTGCTGGCGTCAGGCACGAAA CCGACGGCACGGGCACTTACTTTGTCTCACAAGCCCTTCTTAGGCACCAG GCGCGAGCATTGCGCCTTTTCTTTCGAGATGGCATGAGCCATCTCCGCGT CGACGTAGCTTTCACACGTTATTGGCGTGCATGTCGACTCTTCCGGTGCA ACACGAGATGTTGAGTAACAGATTTTAGTTTTGTCGGGGGAGCTTCTCAC ACGGTGTCCTGCTACTTTGATGTCGAATGCCCTCTGCTATAGCTTTTCGT CGCATAAGAAATGTAGTAGAGAGCGCGAGAGATATTGAGAAGTGAGAGGA ACATACATTGTGCCCCAAAATTGATTTTGCAAGCTGTCTCTACACATACA CCCCGGACACCGACTACGCAGGGTTGGAATGGTGTCAGCAGTATGGCCGC GTAACATCATGACACCCCAGCTTTGGGGAATGCTGTGCATTATGGCGAGC ATCGTCTTGGTAGCTCGGCAGCGGACACAGTCGTTTCCTCTTCAGTCCAA GCAAGGGAGAGCTTCCAACCCGTACCAAGTGCTGGGCTCTGGTGATGTGG CCTCGGGCGTGCGATACAAACCACAGACATACGACGATGGTTCTGACAAC ATTTCATATAAGACACTTGTCATATACGTGTACCATGAGAGCGATGCAGT CACGAAGGAGAACTTACAGTTTTTTTTAAAGGCTGGTGTAGGAGATGTGG AAGATCCGCTCACCGACTACGTCATTGTAGTCAATGGGGAAACAACACTG GACTTGGACGGGCTGCCCCCCAACGTGCGCATAAAATACCGGGACAACAC TTGCTACGACGGGGGCAGTGCTGGAGTAGTTTTGGCTGAAGTTAACATTG CAGAATATCACTTTTTCATCATCATGAACAGCTCGGTTCGCGGGCCTTTC CTCCCCTCCTACTTCTCTCACACTGCCGGGGGCGGTCTGGGAGTTGGTTC TTCCTTATATGCGCAATCGCGGCCGTGGACGACGGCTTTTACGGATCTTT TAAACTCCTATGTCAAACTGGCGGGCACCACCATCAATTGCGAGGTGCAT GTGCATGTTCAATCCATGCTGTTGGCCACTGACTCCGTCGGCCTGAAGAT CTTGATCGATTCGGGTGCATTCGAGTGCGCGCGGGATCGGGATGCTGCCA TTGCCAACTACGAGTTGGGTGCCAGTGCCCGGATCATGGAAAATGGGTAT AGCGTCGACTGCCTTATGCTCCGGTACGCCGGCGTAGATTGGCTTTCACT CAAGTCACCGAAATGTAATCAGTTGCTGAATCCGTACGTGCCGCTCTACA ACGACGGCATGTCCCTCAACCCCCTGGAGGTGGTATTCGTCAAGGTCAAG CCGCACACGCTCGCTTCCGACCACACTGTGCAGCGCTGGACGGACTACGT GCTCGGGAGGGACGACCTGGTGAGTAGTTTCTTTTACAGCTCCACCGTCC AGCGTGTAGTAGCGGACAGGCGAAAGCGGTTGGAGCGCATGGTGCGAGAC TGCGACGCCTCCTTCGACCATGCGAGCTTCCTCGAACGGCACCCAGAGCT GGACCCAGCGGCCAAGTCTGCCAACTACGAGCTCTTCCTCGACAAATACC TTTTTTCCGGTGAGCCTTACCGCTACACAGTACCACACAAGAGGGAGGAG GACGTTCCACATCTATACTGTCGCTCCTTTGTCAAATACGGGGTTCCCGA CTTTTCAGACTGAGGAATTTGTGAGAGGATAGGTTAGAGGACTCCCTGCA AAATATGCGACCATGGAGGAGCTTGAAAACTGTACAGTTCGGATGTAACA GGACGTTAATGCGAATTGGCGTCTCGGACACGTGCCCGGGAATCGCCACG ATGGACCGTGGCCGTGGAGCCCCCGTCACTTACATTGATAGTCAGGCAAA GTGGCTTGATATTACAAGCCAAAATCAAAGTCAACGACGGCTGGCATTTA TCTCTGGTTTCATGGGATTTAATATTTACATGCTTTGCTTAACGTTGGCG ATGTAAAATCTTCCAACAGCGACAAAAAGGACGCATCGCAGGTATTTGAC AACGATAGCACGTTTCATCGCACCTCGAATTCCGTACGTATGAGACCCCT CCGTTCTCTCATTGGACGTGGTTGGATGTGAATTCTACAAATCTGCGTGC ATACCACTTAGGATCCACAGCAGATATCTGGCGAGAATCGTACTTGAAGC TTTTGAAAAAGGTCTCTGCCCGCTTCAAGGCATTGTATTG back to topprotein sequence of rna1432 >rna1432-protein ID=rna1432-protein|Name=rna1432|organism=Nannochloropsis gaditana|type=polypeptide|length=456bp MSTLPVQHEMVGMVSAVWPRNIMTPQLWGMLCIMASIVLVARQRTQSFPL QSKQGRASNPYQVLGSGDVASGVRYKPQTYDDGSDNISYKTLVIYVYHES DAVTKENLQFFLKAGVGDVEDPLTDYVIVVNGETTLDLDGLPPNVRIKYR DNTCYDGGSAGVVLAEVNIAEYHFFIIMNSSVRGPFLPSYFSHTAGGGLG VGSSLYAQSRPWTTAFTDLLNSYVKLAGTTINCEVHVHVQSMLLATDSVG LKILIDSGAFECARDRDAAIANYELGASARIMENGYSVDCLMLRYAGVDW LSLKSPKCNQLLNPYVPLYNDGMSLNPLEVVFVKVKPHTLASDHTVQRWT DYVLGRDDLVSSFFYSSTVQRVVADRRKRLERMVRDCDASFDHASFLERH PELDPAAKSANYELFLDKYLFSGEPYRYTVPHKREEDVPHLYCRSFVKYG VPDFSD back to topmRNA from alignment at CM002457.1:616590..618921+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1432 ID=rna1432|Name=rna1432|organism=Nannochloropsis gaditana|type=mRNA|length=2332bp|location=Sequence derived from alignment at CM002457.1:616590..618921+ (Nannochloropsis gaditana) ACACGTTATTGGCGTGCATGTCGACTCTTCCGGTGCAACACGAGATGTTG
AGTAACAGATTTTAGTTTTGTCGGGGGAGCTTCTCACACGGTGTCCTGCT
ACTTTGATGTCGAATGCCCTCTGCTATAGCTTTTCGTCGCATAAGAAATG
TAGTAGAGAGCGCGAGAGATATTGAGAAGTGAGAGGAACATACATTGTGC
CCCAAAATTGATTTTGCAAGCTGTCTCTACACATACACCCCGGACACCGA
CTACGCAGGGTTGGAATGGTGTCAGCAGTATGGCCGCGTAACATCATGAC
ACCCCAGCTTTGGGGAATGCTGTGCATTATGGCGAGCATCGTCTTGGTAG
CTCGGCAGCGGACACAGTCGTTTCCTCTTCAGTCCAAGCAAGGGAGAGCT
TCCAACCCGTACCAAGTGCTGGGCTCTGGTGATGTGGCCTCGGGCGTGCG
ATACAAACCACAGACATACGACGATGGTTCTGACAACATTTCATATAAGA
CACTTGTCATATACGTGTACCATGAGAGCGATGCAGTCACGAAGGAGAAC
TTACAGTTTTTTTTAAAGGTGTAAAGCGTGGAGAGAGCGGAGGGGGCATT
TAAGTTCGAGTCTCGAGCAGCATTTTAGAATCGCGTTCAAGAACCACAAC
AAAAAGTTAAGCCTCCTTTCTAAgactccctctttttctaaTACTAGGCT
GGTGTAGGAGATGTGGAAGATCCGCTCACCGACTACGTCATTGTAGTCAA
TGGGGAAACAACACTGGACTTGGACGGGCTGCCCCCCAACGTGCGCATAA
AATACCGGGACAACACTTGCTACGACGGGGGCAGTGCTGGAGTAGTTTTG
GCTGAAGTTAACATTGCAGAATATCACTTTTTCATCATCATGAACAGCTC
GGTTCGCgggcctttcctcccctcctacttCTCTCACACTGCCGGGGGCG
GTCTGGGAGTTGGTTCTTCCTTATATGCGCAATCGCGGCCGTGGACGACG
GCTTTTACGGATCTTTTAAACTCCTATGTCAAACTGGCGGGCACCACCAT
CAATTGCGAGGTGCATGTGCATGTTCAATCCATGCTGTTGGCCACTGACT
CCGTCGGCCTGAAGATCTTGATCGATTCGGGTGCATTCGAGTGCGCGCGG
GATCGGGATGCTGCCATTGCCAACTACGAGTTGGGTGCCAGTGCCCGGAT
CATGGAAAATGGGTGAGTACGAGGGGGGCTGCTCGGCTTGTGCAGGTAAT
GAGCCTCTTTTCGCTGACCTCCCATGTCGCCCGCGCAGGTATAGCGTCGA
CTGCCTTATGCTCCGGTACGCCGGCGTAGATTGGCTTTCACTCAAGTCAC
CGAAATGTAATCAGTTGCTGAATCCGTACGTGCCGCTCTACAACGACGGC
ATGTCCCTCAACCCCCTGGAGGTGGTATTCGTCAAGGTCAAGCCGCACAC
GCTCGCTTCCGACCACACTGTGCAGCGCTGGACGGACTACGTGCTCGGGA
GGGACGACCTGGTGAGTAGTTTCTTTTACAGCTCCACCGTCCAGCGTGTA
GTAGCGGACAGGCGAAAGCGGTTGGAGCGCATGGTGCGAGACTGCGACGC
CTCCTTCGACCATGCGAGCTTCCTCGAACGGCACCCAGAGCTGGACCCAG
CGGCCAAGTCTGCCAACTACGAGCTCTTCCTCGACAAATACCTTTTTTCC
GGTGAGCCTTACCGCTACACAGTACCacacaagagggaggaggacgttcC
ACATCTATACTGTCGCTCCTTTGTCAAATACGGGGTTCCCGACTTTTCAG
ACTGAGGAATTTGTGAGAGGATAGGTTAGAGGACTCCCTGCAAAATATGC
GACCATGGAGGAGCTTGAAAACTGTACAGTTCGGATGTAACAGGACGTTA
ATGCGAATTGGCGTCTCGGACACGTGCCCGGGAATCGCCACGATGGACCG
TGGCCGTGGAGCCCCCGTCACTTACATTGATAGTCAGGCAAAGTGGCTTG
ATATTACAAGCCAAAATCAAAGTCAACGACGGCTGGCATTTATCTCTGGT
TTCATGGGATTTAATATTTACATGCTTTGCTTAACGTTGGCGATGTAAAA
TCTTCCAACAGCGACAAAAAGGACGCATCGCAGGTATTTGACAACGATAG
CACGTTTCATCGCACCTCGAATTCCGTACGTATGAGACCCCTCCGTTCTC
TCATTGGACGTGGTTGGATGTGAATTCTACAAATCTGCGTGCATACCACT
TAGGATCCACAGCAGATATCTGGCGAGAATCGTACTTGAAGCTTTTGAAA
AAGGTCTCTGCCCGCTTCAAGGCATTGTATTG back to topCoding sequence (CDS) from alignment at CM002457.1:616590..618921+ >rna1432 ID=rna1432|Name=rna1432|organism=Nannochloropsis gaditana|type=CDS|length=5484bp|location=Sequence derived from alignment at CM002457.1:616590..618921+ (Nannochloropsis gaditana) ATGTCGACTCTTCCGGTGCAACACGAGATGGTTGGAATGGTGTCAGCAGT ATGGCCGCGTAACATCATGACACCCCAGCTTTGGGGAATGCTGTGCATTA TGGCGAGCATCGTCTTGGTAGCTCGGCAGCGGACACAGTCGTTTCCTCTT CAGTCCAAGCAAGGGAGAGCTTCCAACCCGTACCAAGTGCTGGGCTCTGG TGATGTGGCCTCGGGCGTGCGATACAAACCACAGACATACGACGATGGTT CTGACAACATTTCATATAAGACACTTGTCATATACGTGTACCATGAGAGC GATGCAGTCACGAAGGAGAACTTACAGTTTTTTTTAAAGGCTGGTGTAGG AGATGTGGAAGATCCGCTCACCGACTACGTCATTGTAGTCAATGGGGAAA CAACACTGGACTTGGACGGGCTGCCCCCCAACGTGCGCATAAAATACCGG GACAACACTTGCTACGACGGGGGCAGTGCTGGAGTAGTTTTGGCTGAAGT TAACATTGCAGAATATCACTTTTTCATCATCATGAACAGCTCGGTTCGCg ggcctttcctcccctcctacttCTCTCACACTGCCGGGGGCGGTCTGGGA GTTGGTTCTTCCTTATATGCGCAATCGCGGCCGTGGACGACGGCTTTTAC GGATCTTTTAAACTCCTATGTCAAACTGGCGGGCACCACCATCAATTGCG AGGTGCATGTGCATGTTCAATCCATGCTGTTGGCCACTGACTCCGTCGGC CTGAAGATCTTGATCGATTCGGGTGCATTCGAGTGCGCGCGGGATCGGGA TGCTGCCATTGCCAACTACGAGTTGGGTGCCAGTGCCCGGATCATGGAAA ATGGGTATAGCGTCGACTGCCTTATGCTCCGGTACGCCGGCGTAGATTGG CTTTCACTCAAGTCACCGAAATGTAATCAGTTGCTGAATCCGTACGTGCC GCTCTACAACGACGGCATGTCCCTCAACCCCCTGGAGGTGGTATTCGTCA AGGTCAAGCCGCACACGCTCGCTTCCGACCACACTGTGCAGCGCTGGACG GACTACGTGCTCGGGAGGGACGACCTGGTGAGTAGTTTCTTTTACAGCTC CACCGTCCAGCGTGTAGTAGCGGACAGGCGAAAGCGGTTGGAGCGCATGG TGCGAGACTGCGACGCCTCCTTCGACCATGCGAGCTTCCTCGAACGGCAC CCAGAGCTGGACCCAGCGGCCAAGTCTGCCAACTACGAGCTCTTCCTCGA CAAATACCTTTTTTCCGGTGAGCCTTACCGCTACACAGTACCacacaaga gggaggaggacgttcCACATCTATACTGTCGCTCCTTTGTCAAATACGGG GTTCCCGACTTTTCAGACTGAATGTCGACTCTTCCGGTGCAACACGAGAT GGTTGGAATGGTGTCAGCAGTATGGCCGCGTAACATCATGACACCCCAGC TTTGGGGAATGCTGTGCATTATGGCGAGCATCGTCTTGGTAGCTCGGCAG CGGACACAGTCGTTTCCTCTTCAGTCCAAGCAAGGGAGAGCTTCCAACCC GTACCAAGTGCTGGGCTCTGGTGATGTGGCCTCGGGCGTGCGATACAAAC CACAGACATACGACGATGGTTCTGACAACATTTCATATAAGACACTTGTC ATATACGTGTACCATGAGAGCGATGCAGTCACGAAGGAGAACTTACAGTT TTTTTTAAAGGCTGGTGTAGGAGATGTGGAAGATCCGCTCACCGACTACG TCATTGTAGTCAATGGGGAAACAACACTGGACTTGGACGGGCTGCCCCCC AACGTGCGCATAAAATACCGGGACAACACTTGCTACGACGGGGGCAGTGC TGGAGTAGTTTTGGCTGAAGTTAACATTGCAGAATATCACTTTTTCATCA TCATGAACAGCTCGGTTCGCgggcctttcctcccctcctacttCTCTCAC ACTGCCGGGGGCGGTCTGGGAGTTGGTTCTTCCTTATATGCGCAATCGCG GCCGTGGACGACGGCTTTTACGGATCTTTTAAACTCCTATGTCAAACTGG CGGGCACCACCATCAATTGCGAGGTGCATGTGCATGTTCAATCCATGCTG TTGGCCACTGACTCCGTCGGCCTGAAGATCTTGATCGATTCGGGTGCATT CGAGTGCGCGCGGGATCGGGATGCTGCCATTGCCAACTACGAGTTGGGTG CCAGTGCCCGGATCATGGAAAATGGGTATAGCGTCGACTGCCTTATGCTC CGGTACGCCGGCGTAGATTGGCTTTCACTCAAGTCACCGAAATGTAATCA GTTGCTGAATCCGTACGTGCCGCTCTACAACGACGGCATGTCCCTCAACC CCCTGGAGGTGGTATTCGTCAAGGTCAAGCCGCACACGCTCGCTTCCGAC CACACTGTGCAGCGCTGGACGGACTACGTGCTCGGGAGGGACGACCTGGT GAGTAGTTTCTTTTACAGCTCCACCGTCCAGCGTGTAGTAGCGGACAGGC GAAAGCGGTTGGAGCGCATGGTGCGAGACTGCGACGCCTCCTTCGACCAT GCGAGCTTCCTCGAACGGCACCCAGAGCTGGACCCAGCGGCCAAGTCTGC CAACTACGAGCTCTTCCTCGACAAATACCTTTTTTCCGGTGAGCCTTACC GCTACACAGTACCacacaagagggaggaggacgttcCACATCTATACTGT CGCTCCTTTGTCAAATACGGGGTTCCCGACTTTTCAGACTGAATGTCGAC TCTTCCGGTGCAACACGAGATGGTTGGAATGGTGTCAGCAGTATGGCCGC GTAACATCATGACACCCCAGCTTTGGGGAATGCTGTGCATTATGGCGAGC ATCGTCTTGGTAGCTCGGCAGCGGACACAGTCGTTTCCTCTTCAGTCCAA GCAAGGGAGAGCTTCCAACCCGTACCAAGTGCTGGGCTCTGGTGATGTGG CCTCGGGCGTGCGATACAAACCACAGACATACGACGATGGTTCTGACAAC ATTTCATATAAGACACTTGTCATATACGTGTACCATGAGAGCGATGCAGT CACGAAGGAGAACTTACAGTTTTTTTTAAAGGCTGGTGTAGGAGATGTGG AAGATCCGCTCACCGACTACGTCATTGTAGTCAATGGGGAAACAACACTG GACTTGGACGGGCTGCCCCCCAACGTGCGCATAAAATACCGGGACAACAC TTGCTACGACGGGGGCAGTGCTGGAGTAGTTTTGGCTGAAGTTAACATTG CAGAATATCACTTTTTCATCATCATGAACAGCTCGGTTCGCgggcctttc ctcccctcctacttCTCTCACACTGCCGGGGGCGGTCTGGGAGTTGGTTC TTCCTTATATGCGCAATCGCGGCCGTGGACGACGGCTTTTACGGATCTTT TAAACTCCTATGTCAAACTGGCGGGCACCACCATCAATTGCGAGGTGCAT GTGCATGTTCAATCCATGCTGTTGGCCACTGACTCCGTCGGCCTGAAGAT CTTGATCGATTCGGGTGCATTCGAGTGCGCGCGGGATCGGGATGCTGCCA TTGCCAACTACGAGTTGGGTGCCAGTGCCCGGATCATGGAAAATGGGTAT AGCGTCGACTGCCTTATGCTCCGGTACGCCGGCGTAGATTGGCTTTCACT CAAGTCACCGAAATGTAATCAGTTGCTGAATCCGTACGTGCCGCTCTACA ACGACGGCATGTCCCTCAACCCCCTGGAGGTGGTATTCGTCAAGGTCAAG CCGCACACGCTCGCTTCCGACCACACTGTGCAGCGCTGGACGGACTACGT GCTCGGGAGGGACGACCTGGTGAGTAGTTTCTTTTACAGCTCCACCGTCC AGCGTGTAGTAGCGGACAGGCGAAAGCGGTTGGAGCGCATGGTGCGAGAC TGCGACGCCTCCTTCGACCATGCGAGCTTCCTCGAACGGCACCCAGAGCT GGACCCAGCGGCCAAGTCTGCCAACTACGAGCTCTTCCTCGACAAATACC TTTTTTCCGGTGAGCCTTACCGCTACACAGTACCacacaagagggaggag gacgttcCACATCTATACTGTCGCTCCTTTGTCAAATACGGGGTTCCCGA CTTTTCAGACTGAATGTCGACTCTTCCGGTGCAACACGAGATGGTTGGAA TGGTGTCAGCAGTATGGCCGCGTAACATCATGACACCCCAGCTTTGGGGA ATGCTGTGCATTATGGCGAGCATCGTCTTGGTAGCTCGGCAGCGGACACA GTCGTTTCCTCTTCAGTCCAAGCAAGGGAGAGCTTCCAACCCGTACCAAG TGCTGGGCTCTGGTGATGTGGCCTCGGGCGTGCGATACAAACCACAGACA TACGACGATGGTTCTGACAACATTTCATATAAGACACTTGTCATATACGT GTACCATGAGAGCGATGCAGTCACGAAGGAGAACTTACAGTTTTTTTTAA AGGCTGGTGTAGGAGATGTGGAAGATCCGCTCACCGACTACGTCATTGTA GTCAATGGGGAAACAACACTGGACTTGGACGGGCTGCCCCCCAACGTGCG CATAAAATACCGGGACAACACTTGCTACGACGGGGGCAGTGCTGGAGTAG TTTTGGCTGAAGTTAACATTGCAGAATATCACTTTTTCATCATCATGAAC AGCTCGGTTCGCgggcctttcctcccctcctacttCTCTCACACTGCCGG GGGCGGTCTGGGAGTTGGTTCTTCCTTATATGCGCAATCGCGGCCGTGGA CGACGGCTTTTACGGATCTTTTAAACTCCTATGTCAAACTGGCGGGCACC ACCATCAATTGCGAGGTGCATGTGCATGTTCAATCCATGCTGTTGGCCAC TGACTCCGTCGGCCTGAAGATCTTGATCGATTCGGGTGCATTCGAGTGCG CGCGGGATCGGGATGCTGCCATTGCCAACTACGAGTTGGGTGCCAGTGCC CGGATCATGGAAAATGGGTATAGCGTCGACTGCCTTATGCTCCGGTACGC CGGCGTAGATTGGCTTTCACTCAAGTCACCGAAATGTAATCAGTTGCTGA ATCCGTACGTGCCGCTCTACAACGACGGCATGTCCCTCAACCCCCTGGAG GTGGTATTCGTCAAGGTCAAGCCGCACACGCTCGCTTCCGACCACACTGT GCAGCGCTGGACGGACTACGTGCTCGGGAGGGACGACCTGGTGAGTAGTT TCTTTTACAGCTCCACCGTCCAGCGTGTAGTAGCGGACAGGCGAAAGCGG TTGGAGCGCATGGTGCGAGACTGCGACGCCTCCTTCGACCATGCGAGCTT CCTCGAACGGCACCCAGAGCTGGACCCAGCGGCCAAGTCTGCCAACTACG AGCTCTTCCTCGACAAATACCTTTTTTCCGGTGAGCCTTACCGCTACACA GTACCacacaagagggaggaggacgttcCACATCTATACTGTCGCTCCTT TGTCAAATACGGGGTTCCCGACTTTTCAGACTGA back to top
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