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Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
| Orig transcript id | gnl|cribi|Naga_100119g5.7999.mrna |
| Orig protein id | gnl|cribi|Naga_100119g5.7999 |
| Gbkey | mRNA |
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| CM002457.1 | supercontig | CM002457.1:613378..615199 + |
Analyses
This mRNA is derived from or has results from the following analyses
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >rna1429 ID=rna1429|Name=rna1429|organism=Nannochloropsis gaditana|type=mRNA|length=2367bp
ATGTCAAGCTCAGAGTCTGGAGATGATCTTGACGTGAAGAAGGCCCTTGG
GGAGGAGGAGGAGGACGCCGACTACACGCTCGCGAACGCGGACGTCAGCA
CCAAGTATCAGGAGGCTGCGAAAATTGCTAATGTAGCGCTTGACGTTGTC
CTGTCAAAGGTAGAGGTTGGCAAGACCCCTTTAGAGCTCAGTCAGGCAGG
AGACGAGGTGATCGAGGAGAAGTGTAAGAAGATTTTTACCAAGAAGGTAA
AAGGCCGTACCATTGAGAAAGGTGTCGCTTTCCCAACCTGTGTTTCTATC
AACGAGTGCGTATGCCACAACTCTCCGCTTGCATCGGAGGCGCAAGAGCC
CTTGAAGGAGGGCGACCTGGTCAAAGTCGACCTGGGTGTGCACATCGACG
GTTTCGTCTCCGTTGTGGCCCATACGGTTCGCGTCGGACCCGCACCAACC
GCCGAGGAGCCCATCAAGGGCCCAGTGGCAGACGTCTTCCTCGCAGCCTT
GACGGCGTCGGAGGTGGCGATCAAACTTATCAAGCCCGGAAACAGCAACA
AACAAGTCACGGAGGCCATGGCCCGGGTGGCCGAGGCTTTCGGAGTGAAC
GCCATGCAGGGAACCTTGATGCATCAAATGAAGCGGTACATTATCGACGG
GAACAAGGTAATCATCCTCCGCGAGGATGTGGACCAAAAAGTGGACGACG
TCGTCTTCGAGCAGGGGGAGATCTACTCCGTGGACGTTGCCTTCAGCTCC
GGCGAAGGCAAACCCCGCGAGGCAACAAGCCGAACGACTGTGTTCAAACG
GGCCGTGGATGTCAGCTACCGACTGAAAATGAAAGCAAGCAGGTATGTCT
TCAACGAAATGAACCATCGATTCCCTACGCTGCCCTTCACGCTACGGGCA
CTTGAGGACGAGAAGCAGGCGCGTATGGGTGTTGTAGAGTGCTTAAAGCA
CGATCTCCTGCATCCTTACCCGGTTTTGATGGAGAGACCAGGAGATATTG
TCGTTCACTTTAAGGCCACGATTCTGCTCCTGCCATCGGGAACGGCCAAG
GTTACAGGCTTGCCACATCAAAGCAATTCTAGCGACATCCTCAAAGACAA
ACCAAAAGAAGAAGAAGAAGAAGAAGGACAAGGCGGCTATGGATGTTACG
GCTACGTGAAGGCGCAGGAATCTCTTGCTCACCTAGAAATAAAGAGGGGT
CATCGAAGTTTGTCGTCGGATGACAACGGCAATAATAGCTTTGAGCTAAA
TAGCATAGCATATCGCGATCAGGGTCAACGTAACACGGAGACGACAAAGT
GCGCGTGCTCTTTTGAAGATGATCTTGGGGCAAGGTATGCAAGGATTGAA
GAAATGCGCATGCAGAAGCGGCGCCGATGTTCCTCTCCCCCCCCGGCTTC
GGACGCGTCGCGAACTTCAAGAACACCGGCAGGAGCAGGCCTTGAGGCCG
CAGCAACTGGAGGCATTATATATGTGGCTTATAAAGGAAATTCAAGGATT
GTCTGGAAGTACAAGCAGGGAGAAGAAGCTGGACGAGTTGTATCGCTACA
TATCTACCCTGTAAAATCTTGCCGTGGGATTGACGTAGAAGCCTCCCTGG
TTGAGGCCAGGGGCCTAGTGATGGACCGCCTCTGGATGGTCGTGACTTCG
ACAGGGGCTTTCCGGTCACAGCGACAACTTCCAAAAATGGCCCTGATCCA
GCCAAATCTACCCTCATCATTCTCTGCGCCTTTGGAGATGAATGCGCCCG
GCATGCCAACGTGTGTGGTTCCTGTCAAGACGTCTGGCAAACGAATGAGC
GTGCGAGTATGGGGGGATACATGTCAAGGCTATGATCAAGGCGATGACAT
TGCTGGGTGGTTGACTAAATTCTTGGAGGAGGAGGGTTTGAGACTCGTAC
GCATCGATGAGAAAGAGCGCCGACAGGTTGACCTTGCTTTTGCGACGCGC
GGCGCCATCACTGGTTTTGCCGATGGGTTTCCTTTCCTTATGACAAATCA
AGCCTCCCTTGACGACTTGAACTCTCGGCTGGCATCGCCGCTTCCCATGG
CACGATTCCGTCCAAACATCGTCGTGAGTGGCCCTCCCGCTTTTGCCGAA
GATGGTTGGGGCAAGATCAAAATCGGCGATCTGCGTCTCCGCGTTGTGAA
GCCCTGCTCGCGTTGCAAGGTCCCCAACACAGACATCGAGACTGCCGAGG
TGGGGGTTGAGCCCGGTAACACACTTAAAACATTCAGGACCGGGGCTTTG
CTGGGCATCGACATTGGTGGCAAGAATGAGGTTTATTTCGGACAAAACCT
ACTGCACGATTCTCCGAAAAAGGCGAGCTTCCTCTCTGTGGGAGATCCCT
TGACTATATTCGTATGA back to topprotein sequence of rna1429 >rna1429-protein ID=rna1429-protein|Name=rna1429|organism=Nannochloropsis gaditana|type=polypeptide|length=265bp
MSNFASKHPLLTFPIRAAALDRGALQQAPGQDGQPDSGIPPTAGGCSHSR
VFWCPSHVFGAVAICGCFGGHLDCLGGSLFLRNAVRHRFRWIPSQSQRVS
GYVRAWSHFFSRRHRPNPCTAGSGRGRLPPPPKTQPQLRRCGGTLFAGRR
QHHHWGLGRVHLDICPPDVDLSRHHHHRCPRSAPDYCSRNSVPYRRRHSL
HWPCYESDDCLRMGCAERRLQDIRPLSGLLDRADCGCCVGDSPVRCVSGL
VFRRKKEKQSGLSVV back to topmRNA from alignment at CM002457.1:613378..615199+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >rna1429 ID=rna1429|Name=rna1429|organism=Nannochloropsis gaditana|type=mRNA|length=1822bp|location=Sequence derived from alignment at CM002457.1:613378..615199+ (Nannochloropsis gaditana)
CTTCCTGCGGCTGCGTGGTTGCGCTTATCGTCATCAATCTGGGGTTAGGC
GGGCGTCACAGCAGCACCCTACCTTTTTGTCAAACCGAGATTCCCAGATA
CCCTTGCCACGTAATCTTTAAATAGAACATGGCCTAATGTCCAATTTTGC
TTCAAAACACCCCTTGTTGACATTCCCCATCCGAGCAGCAGCACTAGATC
GAGGAGCACTTCAACAGGCACCCGGACAGGATGGGCAGCCAGACAGTGGA
ATCCCCCCGACAGCTGGTGGGTGCAGCCATTCAAGAGTTTTTTGGTGCCC
TTCTCATGTTTTTGGTGCTGTGGCCATTTGTGGGTGTTTTGGGGGACACT
TGGACTGCCTGGGTGGCTCACTTTTTCTTCGTAATGCTGGTAAGGGCGAA
AGGACCTtgtcggggaggaaaatagaAGGCAGGTTGCGAGAAGTCAGGGC
ACGTCCGTCTTAAGCCTTATTTACTCTCCGAAGAGAAATACCATCCGTTA
CAGTGCCGTCAATCGGAAGCATGGCATATTGTTGATAAAGCTACAAGGAT
GTGAAGGAAGGCAATCCCACACCCTTTATTCCTACTCCCTTAGTGCGACA
TCGTTTCAGGTGGATCCCAAGTCAATCCCAGCGTGTCAGTGGCTATGTTC
GTGCATGGAgccatttcttttcccggcGCCATCGTCCGAATCCTTGCACA
GCTGGCAGCGGGCGTGGTCGcctaccccctcctccaaaaacTCAGCCCCA
GCTACGTCGGTGTGGGGGGACCCTGTTTGCAGGACGGCGTCAGCACCACC
ACTGGGGCCTTGGCAGAGTTCACCTTGACATTTGCCCTCCTGACGTTGAT
TTATCTCGCCATCACCATCATCGGTGCCCCCGGTCAGGTACGGGTTGGAG
ATTCCCGAGTCATTGCCAAGATTTTCTACGTAACAAGCTCTCATCTTTAC
TCCATGATCAAAACACACAGCGCCCGATTATTGCAGCAGGAATTCGGTGC
CTTATCGTCGCAGGCACTCCTTACACTGGCCCTGCTATGAATCCGATGAT
TGCCTTCGGATGGGCTGTGCAGAGCGGCGCCTACAAGGTCAGCGTTCTGT
AACTGCCCCTCACATTACCAATTCGGGCCATGCGTTTTTTGAGGCTTATG
cgttctctcctttcctttcagaCATTCGACCACTATCTGGTTTATTGGAT
CGCGCCGACTGTGGGTGCTGTGTTGGCGACAGTCCTGTTCGCTGTGTTTC
AGGCCTCGTTTTTAgacgaaagaaagaaaaacaaaGCGGACTAAGTGTGG
TGTGAAAAAGAGTGAGAGAATATTGCGGGTTGAACGCGGCGATGGCGAGC
TTTTGAGGACTTCGGGATATATCTCGTCACCATCAGAGCCATATTGGCTC
AGACCGGCAGCCCAATCGGAGTGCAATAGCTGCAGGTGGCGCCTGAAAAT
TCGTTATATATAGAGAGCGTGATAAATTTAAATGATGTAAGACGAAAGTC
CACCATTGATACGCCAGTAtgttgattttttttttaaacaCGTCTGGGGT
GAGACTTTCATCTCCGAGAGGGTTGAATCTTATGTGTCGTTACTGATCCG
AAAGAAGGCTCCGAAAGGGTAGCAggtctttttttcctttgtaACATAAC
GAGACTGTGAAATGGTTGTAGTGCGATGAATTGGGTGAACCAGGTCGAGA
GAGCGCGAATGATAGCCTAGGGaccagggggcagggaatgGACGCGCCAT
AAAAGGTGCAGTGGTGCATTTCGATGGCAAGGTGCGCAACTTTTTTGCCC
TTTCCAGCTTAGCGGCCATTTT back to topCoding sequence (CDS) from alignment at CM002457.1:613378..615199+ >rna1429 ID=rna1429|Name=rna1429|organism=Nannochloropsis gaditana|type=CDS|length=3192bp|location=Sequence derived from alignment at CM002457.1:613378..615199+ (Nannochloropsis gaditana)
ATGTCCAATTTTGCTTCAAAACACCCCTTGTTGACATTCCCCATCCGAGC
AGCAGCACTAGATCGAGGAGCACTTCAACAGGCACCCGGACAGGATGGGC
AGCCAGACAGTGGAATCCCCCCGACAGCTGGTGGGTGCAGCCATTCAAGA
GTTTTTTGGTGCCCTTCTCATGTTTTTGGTGCTGTGGCCATTTGTGGGTG
TTTTGGGGGACACTTGGACTGCCTGGGTGGCTCACTTTTTCTTCGTAATG
CTGTGCGACATCGTTTCAGGTGGATCCCAAGTCAATCCCAGCGTGTCAGT
GGCTATGTTCGTGCATGGAgccatttcttttcccggcGCCATCGTCCGAA
TCCTTGCACAGCTGGCAGCGGGCGTGGTCGcctaccccctcctccaaaaa
cTCAGCCCCAGCTACGTCGGTGTGGGGGGACCCTGTTTGCAGGACGGCGT
CAGCACCACCACTGGGGCCTTGGCAGAGTTCACCTTGACATTTGCCCTCC
TGACGTTGATTTATCTCGCCATCACCATCATCGGTGCCCCCGGTCAGCGC
CCGATTATTGCAGCAGGAATTCGGTGCCTTATCGTCGCAGGCACTCCTTA
CACTGGCCCTGCTATGAATCCGATGATTGCCTTCGGATGGGCTGTGCAGA
GCGGCGCCTACAAGaCATTCGACCACTATCTGGTTTATTGGATCGCGCCG
ACTGTGGGTGCTGTGTTGGCGACAGTCCTGTTCGCTGTGTTTCAGGCCTC
GTTTTTAgacgaaagaaagaaaaacaaaGCGGACTAAGTGTGGTGTGAAT
GTCCAATTTTGCTTCAAAACACCCCTTGTTGACATTCCCCATCCGAGCAG
CAGCACTAGATCGAGGAGCACTTCAACAGGCACCCGGACAGGATGGGCAG
CCAGACAGTGGAATCCCCCCGACAGCTGGTGGGTGCAGCCATTCAAGAGT
TTTTTGGTGCCCTTCTCATGTTTTTGGTGCTGTGGCCATTTGTGGGTGTT
TTGGGGGACACTTGGACTGCCTGGGTGGCTCACTTTTTCTTCGTAATGCT
GTGCGACATCGTTTCAGGTGGATCCCAAGTCAATCCCAGCGTGTCAGTGG
CTATGTTCGTGCATGGAgccatttcttttcccggcGCCATCGTCCGAATC
CTTGCACAGCTGGCAGCGGGCGTGGTCGcctaccccctcctccaaaaacT
CAGCCCCAGCTACGTCGGTGTGGGGGGACCCTGTTTGCAGGACGGCGTCA
GCACCACCACTGGGGCCTTGGCAGAGTTCACCTTGACATTTGCCCTCCTG
ACGTTGATTTATCTCGCCATCACCATCATCGGTGCCCCCGGTCAGCGCCC
GATTATTGCAGCAGGAATTCGGTGCCTTATCGTCGCAGGCACTCCTTACA
CTGGCCCTGCTATGAATCCGATGATTGCCTTCGGATGGGCTGTGCAGAGC
GGCGCCTACAAGaCATTCGACCACTATCTGGTTTATTGGATCGCGCCGAC
TGTGGGTGCTGTGTTGGCGACAGTCCTGTTCGCTGTGTTTCAGGCCTCGT
TTTTAgacgaaagaaagaaaaacaaaGCGGACTAAGTGTGGTGTGAATGT
CCAATTTTGCTTCAAAACACCCCTTGTTGACATTCCCCATCCGAGCAGCA
GCACTAGATCGAGGAGCACTTCAACAGGCACCCGGACAGGATGGGCAGCC
AGACAGTGGAATCCCCCCGACAGCTGGTGGGTGCAGCCATTCAAGAGTTT
TTTGGTGCCCTTCTCATGTTTTTGGTGCTGTGGCCATTTGTGGGTGTTTT
GGGGGACACTTGGACTGCCTGGGTGGCTCACTTTTTCTTCGTAATGCTGT
GCGACATCGTTTCAGGTGGATCCCAAGTCAATCCCAGCGTGTCAGTGGCT
ATGTTCGTGCATGGAgccatttcttttcccggcGCCATCGTCCGAATCCT
TGCACAGCTGGCAGCGGGCGTGGTCGcctaccccctcctccaaaaacTCA
GCCCCAGCTACGTCGGTGTGGGGGGACCCTGTTTGCAGGACGGCGTCAGC
ACCACCACTGGGGCCTTGGCAGAGTTCACCTTGACATTTGCCCTCCTGAC
GTTGATTTATCTCGCCATCACCATCATCGGTGCCCCCGGTCAGCGCCCGA
TTATTGCAGCAGGAATTCGGTGCCTTATCGTCGCAGGCACTCCTTACACT
GGCCCTGCTATGAATCCGATGATTGCCTTCGGATGGGCTGTGCAGAGCGG
CGCCTACAAGaCATTCGACCACTATCTGGTTTATTGGATCGCGCCGACTG
TGGGTGCTGTGTTGGCGACAGTCCTGTTCGCTGTGTTTCAGGCCTCGTTT
TTAgacgaaagaaagaaaaacaaaGCGGACTAAGTGTGGTGTGAATGTCC
AATTTTGCTTCAAAACACCCCTTGTTGACATTCCCCATCCGAGCAGCAGC
ACTAGATCGAGGAGCACTTCAACAGGCACCCGGACAGGATGGGCAGCCAG
ACAGTGGAATCCCCCCGACAGCTGGTGGGTGCAGCCATTCAAGAGTTTTT
TGGTGCCCTTCTCATGTTTTTGGTGCTGTGGCCATTTGTGGGTGTTTTGG
GGGACACTTGGACTGCCTGGGTGGCTCACTTTTTCTTCGTAATGCTGTGC
GACATCGTTTCAGGTGGATCCCAAGTCAATCCCAGCGTGTCAGTGGCTAT
GTTCGTGCATGGAgccatttcttttcccggcGCCATCGTCCGAATCCTTG
CACAGCTGGCAGCGGGCGTGGTCGcctaccccctcctccaaaaacTCAGC
CCCAGCTACGTCGGTGTGGGGGGACCCTGTTTGCAGGACGGCGTCAGCAC
CACCACTGGGGCCTTGGCAGAGTTCACCTTGACATTTGCCCTCCTGACGT
TGATTTATCTCGCCATCACCATCATCGGTGCCCCCGGTCAGCGCCCGATT
ATTGCAGCAGGAATTCGGTGCCTTATCGTCGCAGGCACTCCTTACACTGG
CCCTGCTATGAATCCGATGATTGCCTTCGGATGGGCTGTGCAGAGCGGCG
CCTACAAGaCATTCGACCACTATCTGGTTTATTGGATCGCGCCGACTGTG
GGTGCTGTGTTGGCGACAGTCCTGTTCGCTGTGTTTCAGGCCTCGTTTTT
AgacgaaagaaagaaaaacaaaGCGGACTAAGTGTGGTGTGA back to top
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